Non-Coding RNA Search

Cow genome map


           Conread name:
           Pla1-C0000023_G24
        

               Conread position:
               7-331
               

               Cow position:
               chr9:30477539-30477866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 178
               

               Conread position:
               10-298
               

               Cow position:
               chr9:17928994-17928699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               10-331
               

               Cow position:
               chr9:7410004-7409671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               10-336
               

               Cow position:
               chr9:17799872-17799534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               45, 289
               

               Conread position:
               11-322
               

               Cow position:
               chr9:42062356-42062017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               23-331
               

               Cow position:
               chr9:10308780-10309086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               237
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               38, 7
               

               Conread position:
               27-323
               

               Cow position:
               chr9:31347179-31346867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               47, 76
               

               Conread position:
               27-331
               

               Cow position:
               chr9:8338255-8337936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 95
               

               Conread position:
               27-333
               

               Cow position:
               chr9:29684362-29684052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               29-287
               

               Cow position:
               chr9:35904528-35904792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               88, 45
               

               Conread position:
               29-313
               

               Cow position:
               chr9:49417205-49416914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               79, 15
               

               Conread position:
               29-322
               

               Cow position:
               chr9:32371538-32371833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               42, 150
               

               Conread position:
               29-328
               

               Cow position:
               chr9:388792-389105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               41, 142
               

               Conread position:
               29-328
               

               Cow position:
               chr9:3959277-3958979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 138
               

               Conread position:
               29-331
               

               Cow position:
               chr9:3070200-3070501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               229
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               79, 43
               

               Conread position:
               29-331
               

               Cow position:
               chr9:5501074-5500761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 38
               

               Conread position:
               29-336
               

               Cow position:
               chr9:42445759-42446082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               31-238
               

               Cow position:
               chr9:30749364-30749587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               42, 156
               

               Conread position:
               31-246
               

               Cow position:
               chr9:26390989-26390764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 153
               

               Conread position:
               31-280
               

               Cow position:
               chr9:48106899-48107156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 115
               

               Conread position:
               31-293
               

               Cow position:
               chr9:31077457-31077723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 91
               

               Conread position:
               31-296
               

               Cow position:
               chr9:20989233-20989514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               40, 143
               

               Conread position:
               31-316
               

               Cow position:
               chr9:18342944-18342657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               13, 47
               

               Conread position:
               31-319
               

               Cow position:
               chr9:58979622-58979319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               43, 161
               

               Conread position:
               31-323
               

               Cow position:
               chr9:10011021-10010732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               71, 156
               

               Conread position:
               31-323
               

               Cow position:
               chr9:19714290-19713997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               76, 55
               

               Conread position:
               31-328
               

               Cow position:
               chr9:36490674-36490989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               31-330
               

               Cow position:
               chr9:20416288-20416595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               40, 117
               

               Conread position:
               31-331
               

               Cow position:
               chr9:13670857-13670542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               40, 139
               

               Conread position:
               31-331
               

               Cow position:
               chr9:18216879-18217190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 161
               

               Conread position:
               31-331
               

               Cow position:
               chr9:20091260-20090955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               45, 154
               

               Conread position:
               31-336
               

               Cow position:
               chr9:49764877-49764552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               38, 171
               

               Conread position:
               32-210
               

               Cow position:
               chr9:49403972-49403789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               32-220
               

               Cow position:
               chr9:18002729-18002934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               32-223
               

               Cow position:
               chr9:50667644-50667438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               39, 167
               

               Conread position:
               32-227
               

               Cow position:
               chr9:23028014-23027817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               69, 107
               

               Conread position:
               32-227
               

               Cow position:
               chr9:53602633-53602440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               69, 47
               

               Conread position:
               32-230
               

               Cow position:
               chr9:1712264-1712466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               80, 41
               

               Conread position:
               32-231
               

               Cow position:
               chr9:28773337-28773130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               82, 160
               

               Conread position:
               32-233
               

               Cow position:
               chr9:29034819-29035029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               32-238
               

               Cow position:
               chr9:54611011-54611234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 117
               

               Conread position:
               32-245
               

               Cow position:
               chr9:5399939-5399731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 152
               

               Conread position:
               32-247
               

               Cow position:
               chr9:32711152-32710922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 156
               

               Conread position:
               32-248
               

               Cow position:
               chr9:36827345-36827127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               32-248
               

               Cow position:
               chr9:38344114-38343879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               32-253
               

               Cow position:
               chr9:6225232-6225468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               32-255
               

               Cow position:
               chr9:8868916-8869158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 116
               

               Conread position:
               32-258
               

               Cow position:
               chr9:20961068-20961298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               23, 58
               

               Conread position:
               32-260
               

               Cow position:
               chr9:59507301-59507065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 37
               

               Conread position:
               32-262
               

               Cow position:
               chr9:3387911-3387667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               32-267
               

               Cow position:
               chr9:9416187-9416422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               80, 151
               

               Conread position:
               32-267
               

               Cow position:
               chr9:35533731-35533980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               42, 163
               

               Conread position:
               32-267
               

               Cow position:
               chr9:35850119-35849877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               39, 81
               

               Conread position:
               32-269
               

               Cow position:
               chr9:25958635-25958388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               39, 101
               

               Conread position:
               32-277
               

               Cow position:
               chr9:20318358-20318609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               39, 133
               

               Conread position:
               32-280
               

               Cow position:
               chr9:41789499-41789244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               85, 159
               

               Conread position:
               32-288
               

               Cow position:
               chr9:22114413-22114683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 190
               

               Conread position:
               32-288
               

               Cow position:
               chr9:22638320-22638054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 161
               

               Conread position:
               32-288
               

               Cow position:
               chr9:35375644-35375378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               56, 42
               

               Conread position:
               32-293
               

               Cow position:
               chr9:647996-647724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               25, 141
               

               Conread position:
               32-294
               

               Cow position:
               chr9:5161846-5162104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               42, 106
               

               Conread position:
               32-300
               

               Cow position:
               chr9:8534463-8534750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               214
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               44, 128
               

               Conread position:
               32-300
               

               Cow position:
               chr9:24997294-24997577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 170
               

               Conread position:
               32-315
               

               Cow position:
               chr9:44921186-44921474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 68
               

               Conread position:
               32-316
               

               Cow position:
               chr9:3220343-3220060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               38, 20
               

               Conread position:
               32-316
               

               Cow position:
               chr9:33823318-33823042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 81
               

               Conread position:
               32-316
               

               Cow position:
               chr9:46316568-46316857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               43, 152
               

               Conread position:
               32-322
               

               Cow position:
               chr9:4646108-4646406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               42, 161
               

               Conread position:
               32-322
               

               Cow position:
               chr9:28747302-28747602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 158
               

               Conread position:
               32-322
               

               Cow position:
               chr9:45141385-45141682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               39, 66
               

               Conread position:
               32-322
               

               Cow position:
               chr9:53762921-53762612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               32-323
               

               Cow position:
               chr9:1520510-1520822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               39, 170
               

               Conread position:
               32-323
               

               Cow position:
               chr9:1729456-1729757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               42, 105
               

               Conread position:
               32-323
               

               Cow position:
               chr9:1938346-1938041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               43, 117
               

               Conread position:
               32-323
               

               Cow position:
               chr9:6933852-6934156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               225
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               39, 12
               

               Conread position:
               32-323
               

               Cow position:
               chr9:9461435-9461737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               40, 198
               

               Conread position:
               32-323
               

               Cow position:
               chr9:9753175-9753473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               70, 35
               

               Conread position:
               32-323
               

               Cow position:
               chr9:17740724-17741024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               43, 149
               

               Conread position:
               32-323
               

               Cow position:
               chr9:20321896-20322176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               44, 122
               

               Conread position:
               32-323
               

               Cow position:
               chr9:22151867-22152168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               42, 57
               

               Conread position:
               32-323
               

               Cow position:
               chr9:22318558-22318269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               82, 45
               

               Conread position:
               32-323
               

               Cow position:
               chr9:22696437-22696140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               32-323
               

               Cow position:
               chr9:25922044-25921740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               15, 11
               

               Conread position:
               32-323
               

               Cow position:
               chr9:28354738-28354434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               32-323
               

               Cow position:
               chr9:28726503-28726813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               32-323
               

               Cow position:
               chr9:29184913-29185220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               32-323
               

               Cow position:
               chr9:29825256-29824947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               39, 235
               

               Conread position:
               32-323
               

               Cow position:
               chr9:31078862-31079162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 62
               

               Conread position:
               32-323
               

               Cow position:
               chr9:32307016-32307314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               27, 154
               

               Conread position:
               32-323
               

               Cow position:
               chr9:34468372-34468661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               32-323
               

               Cow position:
               chr9:35027953-35028248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               76, 20
               

               Conread position:
               32-323
               

               Cow position:
               chr9:47869227-47868933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               39, 121
               

               Conread position:
               32-323
               

               Cow position:
               chr9:48118482-48118764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               32-323
               

               Cow position:
               chr9:50977026-50977336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               39, 105
               

               Conread position:
               32-323
               

               Cow position:
               chr9:55074915-55075211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               70, 31
               

               Conread position:
               32-323
               

               Cow position:
               chr9:60110453-60110167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               32-323
               

               Cow position:
               chr9:62657012-62656720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               32-323
               

               Cow position:
               chr9:63746024-63745732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               50, 143
               

               Conread position:
               32-323
               

               Cow position:
               chr9:64050336-64050644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               28, 145
               

               Conread position:
               32-323
               

               Cow position:
               chr9:64091908-64091596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               32-324
               

               Cow position:
               chr9:18252703-18252996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 103
               

               Conread position:
               32-325
               

               Cow position:
               chr9:31626369-31626048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               25, 72
               

               Conread position:
               32-327
               

               Cow position:
               chr9:1532112-1532421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 105
               

               Conread position:
               32-327
               

               Cow position:
               chr9:28983401-28983096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               23, 229
               

               Conread position:
               32-328
               

               Cow position:
               chr9:1973162-1972860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               25, 162
               

               Conread position:
               32-328
               

               Cow position:
               chr9:5209804-5209495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               23, 152
               

               Conread position:
               32-328
               

               Cow position:
               chr9:8951123-8950808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 181
               

               Conread position:
               32-329
               

               Cow position:
               chr9:5246069-5245764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 35
               

               Conread position:
               32-329
               

               Cow position:
               chr9:32676906-32676590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               28, 173
               

               Conread position:
               32-329
               

               Cow position:
               chr9:32732466-32732768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               47, 164
               

               Conread position:
               32-329
               

               Cow position:
               chr9:37069349-37069647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               42, 152
               

               Conread position:
               32-330
               

               Cow position:
               chr9:11299476-11299770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               85, 22
               

               Conread position:
               32-330
               

               Cow position:
               chr9:21888389-21888080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 164
               

               Conread position:
               32-330
               

               Cow position:
               chr9:26086287-26085968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 131
               

               Conread position:
               32-330
               

               Cow position:
               chr9:37017104-37016808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 80
               

               Conread position:
               32-330
               

               Cow position:
               chr9:52407390-52407069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               38, 274
               

               Conread position:
               32-330
               

               Cow position:
               chr9:61739137-61738832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               38, 23
               

               Conread position:
               32-330
               

               Cow position:
               chr9:64155636-64155943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               35, 143
               

               Conread position:
               32-331
               

               Cow position:
               chr9:1751554-1751246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 155
               

               Conread position:
               32-331
               

               Cow position:
               chr9:1950140-1949824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               43, 162
               

               Conread position:
               32-331
               

               Cow position:
               chr9:4267760-4268077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               25, 144
               

               Conread position:
               32-331
               

               Cow position:
               chr9:4580200-4580495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               42, 147
               

               Conread position:
               32-331
               

               Cow position:
               chr9:5433855-5433541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               32-331
               

               Cow position:
               chr9:5756783-5757080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               40, 136
               

               Conread position:
               32-331
               

               Cow position:
               chr9:6192239-6192551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               39, 154
               

               Conread position:
               32-331
               

               Cow position:
               chr9:6840231-6839901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               32-331
               

               Cow position:
               chr9:6952310-6952010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               39, 84
               

               Conread position:
               32-331
               

               Cow position:
               chr9:8288837-8288527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               39, 166
               

               Conread position:
               32-331
               

               Cow position:
               chr9:8546538-8546239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               39, 147
               

               Conread position:
               32-331
               

               Cow position:
               chr9:8636872-8636573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               39, 71
               

               Conread position:
               32-331
               

               Cow position:
               chr9:10144252-10144569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               42, 211
               

               Conread position:
               32-331
               

               Cow position:
               chr9:16300350-16300661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               32-331
               

               Cow position:
               chr9:17871887-17872201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               32-331
               

               Cow position:
               chr9:21459937-21460242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 132
               

               Conread position:
               32-331
               

               Cow position:
               chr9:33598201-33597895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               39, 157
               

               Conread position:
               32-331
               

               Cow position:
               chr9:33940827-33940515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               38, 155
               

               Conread position:
               32-331
               

               Cow position:
               chr9:34287014-34286708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               74, 7
               

               Conread position:
               32-331
               

               Cow position:
               chr9:35167388-35167085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 132
               

               Conread position:
               32-331
               

               Cow position:
               chr9:41513839-41513541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               76, 42
               

               Conread position:
               32-331
               

               Cow position:
               chr9:42498049-42497734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               38, 192
               

               Conread position:
               32-331
               

               Cow position:
               chr9:44467129-44467433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               34, 141
               

               Conread position:
               32-331
               

               Cow position:
               chr9:44914875-44915187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               87, 27
               

               Conread position:
               32-331
               

               Cow position:
               chr9:50080826-50081131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 154
               

               Conread position:
               32-331
               

               Cow position:
               chr9:50139501-50139194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 117
               

               Conread position:
               32-331
               

               Cow position:
               chr9:55084077-55084392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 218
               

               Conread position:
               32-331
               

               Cow position:
               chr9:55118299-55117995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               32-331
               

               Cow position:
               chr9:55890029-55889724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               31, 160
               

               Conread position:
               32-331
               

               Cow position:
               chr9:56011717-56011407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               25, 108
               

               Conread position:
               32-331
               

               Cow position:
               chr9:57896905-57897203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               72, 42
               

               Conread position:
               32-331
               

               Cow position:
               chr9:59386557-59386860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               50, 102
               

               Conread position:
               32-331
               

               Cow position:
               chr9:61997375-61997694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               39, 138
               

               Conread position:
               32-331
               

               Cow position:
               chr9:64106127-64105807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               32-332
               

               Cow position:
               chr9:55287674-55287981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 107
               

               Conread position:
               32-336
               

               Cow position:
               chr9:13169448-13169760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               39, 57
               

               Conread position:
               32-336
               

               Cow position:
               chr9:23388458-23388771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 134
               

               Conread position:
               32-336
               

               Cow position:
               chr9:34957831-34958153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               25, 119
               

               Conread position:
               32-346
               

               Cow position:
               chr9:5319849-5319514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 217
               

               Conread position:
               32-366
               

               Cow position:
               chr9:30652490-30652840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 8
               

               Conread position:
               32-401
               

               Cow position:
               chr9:40542334-40541970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               33-227
               

               Cow position:
               chr9:6117928-6118136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               24, 108
               

               Conread position:
               33-287
               

               Cow position:
               chr9:25546853-25546593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               26, 148
               

               Conread position:
               33-288
               

               Cow position:
               chr9:53257841-53258102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               32, 137
               

               Conread position:
               33-305
               

               Cow position:
               chr9:49710063-49709782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 109
               

               Conread position:
               33-312
               

               Cow position:
               chr9:44831836-44832124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               33-323
               

               Cow position:
               chr9:824174-823879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               74, 19
               

               Conread position:
               33-323
               

               Cow position:
               chr9:5763411-5763713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               24, 154
               

               Conread position:
               33-323
               

               Cow position:
               chr9:7634486-7634188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               33-323
               

               Cow position:
               chr9:15805702-15806006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               24, 152
               

               Conread position:
               33-323
               

               Cow position:
               chr9:26057219-26057513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               14, 165
               

               Conread position:
               33-323
               

               Cow position:
               chr9:31814159-31814469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               41, 137
               

               Conread position:
               33-323
               

               Cow position:
               chr9:45756579-45756280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 102
               

               Conread position:
               33-323
               

               Cow position:
               chr9:62442503-62442207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               33-327
               

               Cow position:
               chr9:9595735-9596039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               24, 152
               

               Conread position:
               33-330
               

               Cow position:
               chr9:18381078-18380775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               38, 147
               

               Conread position:
               33-330
               

               Cow position:
               chr9:26344765-26345059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               33-331
               

               Cow position:
               chr9:54716402-54716693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               109, 36
               

               Conread position:
               33-356
               

               Cow position:
               chr9:14796559-14796886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               34-244
               

               Cow position:
               chr9:5532171-5531938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               34-300
               

               Cow position:
               chr9:39577952-39577679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               40, 164
               

               Conread position:
               34-314
               

               Cow position:
               chr9:17676903-17677184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 100
               

               Conread position:
               34-319
               

               Cow position:
               chr9:45285313-45285614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               37, 66
               

               Conread position:
               34-322
               

               Cow position:
               chr9:30402202-30402508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               34-323
               

               Cow position:
               chr9:5218961-5219255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               34-323
               

               Cow position:
               chr9:5594718-5594420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               215
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               36, 161
               

               Conread position:
               34-323
               

               Cow position:
               chr9:9723662-9723959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               22, 153
               

               Conread position:
               34-323
               

               Cow position:
               chr9:22433723-22434011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               118, 25
               

               Conread position:
               34-323
               

               Cow position:
               chr9:26434849-26435140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               85, 41
               

               Conread position:
               34-323
               

               Cow position:
               chr9:35128712-35128396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               34-327
               

               Cow position:
               chr9:23042994-23042691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 66
               

               Conread position:
               34-328
               

               Cow position:
               chr9:38961220-38961516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               61, 129
               

               Conread position:
               34-330
               

               Cow position:
               chr9:54681720-54681421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               40, 56
               

               Conread position:
               34-331
               

               Cow position:
               chr9:11319414-11319727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               22, 138
               

               Conread position:
               34-332
               

               Cow position:
               chr9:33218734-33219043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               27, 189
               

               Conread position:
               36-322
               

               Cow position:
               chr9:9443384-9443683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               11, 167
               

               Conread position:
               36-323
               

               Cow position:
               chr9:53413036-53413321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 88
               

               Conread position:
               36-329
               

               Cow position:
               chr9:33093170-33092869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               37, 127
               

               Conread position:
               36-330
               

               Cow position:
               chr9:9199568-9199869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               35, 154
               

               Conread position:
               36-330
               

               Cow position:
               chr9:33119666-33119978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               35, 151
               

               Conread position:
               36-330
               

               Cow position:
               chr9:43444011-43443714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 151
               

               Conread position:
               36-331
               

               Cow position:
               chr9:9552303-9551998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               37-260
               

               Cow position:
               chr9:1952054-1952290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               37-323
               

               Cow position:
               chr9:11123277-11123566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               46, 228
               

               Conread position:
               38-228
               

               Cow position:
               chr9:40604159-40603957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               39-323
               

               Cow position:
               chr9:25805043-25804748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               39-323
               

               Cow position:
               chr9:43871188-43870892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               40-322
               

               Cow position:
               chr9:9402970-9403261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               82, 27
               

               Conread position:
               41-323
               

               Cow position:
               chr9:34901910-34902184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               69, 13
               

               Conread position:
               41-331
               

               Cow position:
               chr9:56773285-56772985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               82, 13
               

               Conread position:
               42-323
               

               Cow position:
               chr9:37678092-37677811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               62, 10
               

               Conread position:
               43-315
               

               Cow position:
               chr9:24873033-24872761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               83, 36
               

               Conread position:
               44-277
               

               Cow position:
               chr9:4512694-4512451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 8
               

               Conread position:
               44-299
               

               Cow position:
               chr9:54924825-54924561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               44-316
               

               Cow position:
               chr9:6879973-6879703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               44-323
               

               Cow position:
               chr9:19903268-19902999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               44-323
               

               Cow position:
               chr9:24887401-24887123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               44-336
               

               Cow position:
               chr9:7363230-7362932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               45-331
               

               Cow position:
               chr9:38793215-38792923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               60, 9
               

               Conread position:
               46-239
               

               Cow position:
               chr9:58133825-58134019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               62, 8
               

               Conread position:
               46-252
               

               Cow position:
               chr9:33038261-33038473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 11
               

               Conread position:
               46-254
               

               Cow position:
               chr9:50702915-50703125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 8
               

               Conread position:
               46-291
               

               Cow position:
               chr9:27310559-27310804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               46-305
               

               Cow position:
               chr9:4861589-4861319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               67, 11
               

               Conread position:
               46-322
               

               Cow position:
               chr9:26403986-26403703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               46-324
               

               Cow position:
               chr9:15006554-15006834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               63, 8
               

               Conread position:
               46-325
               

               Cow position:
               chr9:39428599-39428886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               62, 8
               

               Conread position:
               46-331
               

               Cow position:
               chr9:6397580-6397876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               57, 8
               

               Conread position:
               46-331
               

               Cow position:
               chr9:34374731-34375015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               80, 8
               

               Conread position:
               46-331
               

               Cow position:
               chr9:54528712-54528423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               46-331
               

               Cow position:
               chr9:56453529-56453247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               79, 8
               

               Conread position:
               46-332
               

               Cow position:
               chr9:64559681-64559974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 143
               

               Conread position:
               47-243
               

               Cow position:
               chr9:8920198-8919987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               54, 5
               

               Conread position:
               47-244
               

               Cow position:
               chr9:35359902-35360108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 150
               

               Conread position:
               47-249
               

               Cow position:
               chr9:18162955-18163169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               27, 5
               

               Conread position:
               47-312
               

               Cow position:
               chr9:47500003-47500284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 5
               

               Conread position:
               47-323
               

               Cow position:
               chr9:16811459-16811737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 5
               

               Conread position:
               47-323
               

               Cow position:
               chr9:44710025-44709746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               58, 7
               

               Conread position:
               47-323
               

               Cow position:
               chr9:46981032-46981310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 5
               

               Conread position:
               47-326
               

               Cow position:
               chr9:19493259-19493552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 5
               

               Conread position:
               47-327
               

               Cow position:
               chr9:28948052-28947774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               66, 5
               

               Conread position:
               47-331
               

               Cow position:
               chr9:5509924-5509634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               24, 5
               

               Conread position:
               48-315
               

               Cow position:
               chr9:36445822-36445545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 7
               

               Conread position:
               49-323
               

               Cow position:
               chr9:9815616-9815330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               16, 121
               

               Conread position:
               49-323
               

               Cow position:
               chr9:55321832-55321554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               74, 12
               

               Conread position:
               52-309
               

               Cow position:
               chr9:214272-214529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 57
               

               Conread position:
               52-309
               

               Cow position:
               chr9:11364089-11363828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 160
               

               Conread position:
               52-314
               

               Cow position:
               chr9:41679941-41679673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               57, 129
               

               Conread position:
               52-318
               

               Cow position:
               chr9:47906084-47906357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 251
               

               Conread position:
               52-320
               

               Cow position:
               chr9:60027391-60027117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               52-322
               

               Cow position:
               chr9:56253097-56252820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 177
               

               Conread position:
               52-323
               

               Cow position:
               chr9:42037849-42037570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 234
               

               Conread position:
               52-331
               

               Cow position:
               chr9:56032131-56032407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               53-321
               

               Cow position:
               chr9:59795088-59795375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               61, 132
               

               Conread position:
               53-326
               

               Cow position:
               chr9:32816939-32817227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 237
               

               Conread position:
               55-323
               

               Cow position:
               chr9:19555567-19555293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               37, 114
               

               Conread position:
               56-298
               

               Cow position:
               chr9:8998548-8998291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               56-308
               

               Cow position:
               chr9:54178253-54178488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               57-315
               

               Cow position:
               chr9:23430955-23431222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 90
               

               Conread position:
               57-322
               

               Cow position:
               chr9:48628218-48627946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               65, 117
               

               Conread position:
               57-323
               

               Cow position:
               chr9:30124111-30123846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               49, 100
               

               Conread position:
               57-323
               

               Cow position:
               chr9:41728446-41728177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               53, 12
               

               Conread position:
               57-324
               

               Cow position:
               chr9:10980931-10981197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 8
               

               Conread position:
               57-329
               

               Cow position:
               chr9:3932154-3931874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               54, 156
               

               Conread position:
               57-331
               

               Cow position:
               chr9:8563028-8562731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               49, 214
               

               Conread position:
               57-331
               

               Cow position:
               chr9:8723983-8723703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               57-331
               

               Cow position:
               chr9:38846162-38846425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 116
               

               Conread position:
               57-331
               

               Cow position:
               chr9:50543235-50543518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               60, 6
               

               Conread position:
               58-267
               

               Cow position:
               chr9:44833785-44833990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               58-323
               

               Cow position:
               chr9:54437451-54437179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 151
               

               Conread position:
               60-326
               

               Cow position:
               chr9:34106910-34106628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 117
               

               Conread position:
               60-330
               

               Cow position:
               chr9:56065736-56065474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               43, 98
               

               Conread position:
               62-323
               

               Cow position:
               chr9:15215512-15215770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               62-323
               

               Cow position:
               chr9:29091970-29091690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               116, 19
               

               Conread position:
               63-323
               

               Cow position:
               chr9:25584005-25583747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               57, 44
               

               Conread position:
               65-323
               

               Cow position:
               chr9:26278994-26279252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               41, 116
               

               Conread position:
               65-323
               

               Cow position:
               chr9:31638458-31638739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               42, 209
               

               Conread position:
               65-331
               

               Cow position:
               chr9:11168913-11168638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 123
               

               Conread position:
               69-240
               

               Cow position:
               chr9:47445848-47446028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               50, 103
               

               Conread position:
               69-249
               

               Cow position:
               chr9:40543143-40543334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               36, 110
               

               Conread position:
               69-286
               

               Cow position:
               chr9:27029525-27029751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 112
               

               Conread position:
               69-298
               

               Cow position:
               chr9:9823327-9823564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               44, 124
               

               Conread position:
               69-331
               

               Cow position:
               chr9:8901045-8901319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               69-331
               

               Cow position:
               chr9:9654133-9654398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               41, 139
               

               Conread position:
               69-331
               

               Cow position:
               chr9:40215422-40215155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               32, 113
               

               Conread position:
               69-371
               

               Cow position:
               chr9:58204838-58204551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 61
               

               Conread position:
               74-322
               

               Cow position:
               chr9:12225808-12226059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               42, 5
               

               Conread position:
               74-323
               

               Cow position:
               chr9:62668426-62668167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               27, 81
               

               Conread position:
               74-331
               

               Cow position:
               chr9:25557139-25556879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               52, 74
               

               Conread position:
               75-323
               

               Cow position:
               chr9:3738049-3738307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 119
               

               Conread position:
               75-331
               

               Cow position:
               chr9:19067950-19067691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               48, 174
               

               Conread position:
               77-323
               

               Cow position:
               chr9:26477387-26477132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               78-332
               

               Cow position:
               chr9:50202739-50202471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 87
               

               Conread position:
               81-323
               

               Cow position:
               chr9:12281136-12280888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               81-323
               

               Cow position:
               chr9:54493291-54493052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               101, 33
               

               Conread position:
               81-331
               

               Cow position:
               chr9:20579439-20579686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               45, 133
               

               Conread position:
               81-331
               

               Cow position:
               chr9:51720735-51720988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 106
               

               Conread position:
               85-323
               

               Cow position:
               chr9:5836308-5836062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               159, 95
               

               Conread position:
               86-323
               

               Cow position:
               chr9:3378906-3378671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 155
               

               Conread position:
               87-323
               

               Cow position:
               chr9:9312014-9311775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               87-323
               

               Cow position:
               chr9:41394496-41394730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               96-324
               

               Cow position:
               chr9:17411049-17411277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-323
               

               Cow position:
               chr9:4630243-4630021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               100-323
               

               Cow position:
               chr9:6189233-6189448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               101-281
               

               Cow position:
               chr9:1371069-1370887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 88
               

               Conread position:
               101-323
               

               Cow position:
               chr9:35889096-35889313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               101-327
               

               Cow position:
               chr9:11303944-11304162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               101-327
               

               Cow position:
               chr9:50544489-50544723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               24, 185
               

               Conread position:
               101-336
               

               Cow position:
               chr9:20848069-20847838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               79, 161
               

               Conread position:
               103-331
               

               Cow position:
               chr9:62724672-62724440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               85, 139
               

               Conread position:
               104-276
               

               Cow position:
               chr9:43013858-43013686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               80, 52
               

               Conread position:
               104-277
               

               Cow position:
               chr9:1756010-1756182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               104-277
               

               Cow position:
               chr9:6338930-6338756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               104-277
               

               Cow position:
               chr9:11969322-11969149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 68
               

               Conread position:
               104-277
               

               Cow position:
               chr9:25964696-25964870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               104-296
               

               Cow position:
               chr9:6089226-6089033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               104-318
               

               Cow position:
               chr9:15225164-15225374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               104-319
               

               Cow position:
               chr9:5456043-5456254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               179, 65
               

               Conread position:
               104-321
               

               Cow position:
               chr9:51566360-51566576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               81, 53
               

               Conread position:
               104-323
               

               Cow position:
               chr9:3186262-3186043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               74, 64
               

               Conread position:
               104-323
               

               Cow position:
               chr9:3774295-3774082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               104-323
               

               Cow position:
               chr9:4262958-4263172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               67, 122
               

               Conread position:
               104-323
               

               Cow position:
               chr9:5399272-5399052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               104-323
               

               Cow position:
               chr9:28391901-28392109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               199, 65
               

               Conread position:
               104-323
               

               Cow position:
               chr9:28686526-28686305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               104-323
               

               Cow position:
               chr9:33697163-33696953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               104-323
               

               Cow position:
               chr9:35105656-35105873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               82, 13
               

               Conread position:
               104-323
               

               Cow position:
               chr9:39681474-39681256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               104-323
               

               Cow position:
               chr9:41283148-41282932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               104-323
               

               Cow position:
               chr9:44396794-44396579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               23, 69
               

               Conread position:
               104-323
               

               Cow position:
               chr9:52513318-52513530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               104-323
               

               Cow position:
               chr9:63153685-63153897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               180, 29
               

               Conread position:
               104-324
               

               Cow position:
               chr9:27279443-27279225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               104-324
               

               Cow position:
               chr9:32669813-32670031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               104-325
               

               Cow position:
               chr9:49293011-49293228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               104-329
               

               Cow position:
               chr9:6851934-6852156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               87, 138
               

               Conread position:
               104-329
               

               Cow position:
               chr9:34284082-34283865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               95, 49
               

               Conread position:
               104-330
               

               Cow position:
               chr9:17518356-17518579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               104-331
               

               Cow position:
               chr9:11313377-11313605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               191, 82
               

               Conread position:
               104-331
               

               Cow position:
               chr9:12910267-12910494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               213, 64
               

               Conread position:
               104-331
               

               Cow position:
               chr9:17310428-17310653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               65, 142
               

               Conread position:
               104-331
               

               Cow position:
               chr9:33114481-33114255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               104-331
               

               Cow position:
               chr9:36843921-36843702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               126, 71
               

               Conread position:
               104-331
               

               Cow position:
               chr9:39011342-39011562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               214, 31
               

               Conread position:
               104-331
               

               Cow position:
               chr9:40005610-40005384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               104-331
               

               Cow position:
               chr9:40507470-40507690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               216, 52
               

               Conread position:
               104-332
               

               Cow position:
               chr9:1867584-1867358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               219, 77
               

               Conread position:
               104-332
               

               Cow position:
               chr9:52839752-52839973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               213, 73
               

               Conread position:
               104-336
               

               Cow position:
               chr9:6596100-6596326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               72, 80
               

               Conread position:
               104-336
               

               Cow position:
               chr9:31216219-31215984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               164, 60
               

               Conread position:
               105-298
               

               Cow position:
               chr9:43937073-43936887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               105-323
               

               Cow position:
               chr9:50076191-50075981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               106-321
               

               Cow position:
               chr9:13743800-13744011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               106-323
               

               Cow position:
               chr9:39211739-39211522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               114, 156
               

               Conread position:
               106-331
               

               Cow position:
               chr9:5899829-5900052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               129, 77
               

               Conread position:
               106-367
               

               Cow position:
               chr9:53326618-53326885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               71, 114
               

               Conread position:
               106-370
               

               Cow position:
               chr9:34911293-34911025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               69, 104
               

               Conread position:
               111-323
               

               Cow position:
               chr9:44584724-44584510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               43, 7
               

               Conread position:
               111-331
               

               Cow position:
               chr9:3353479-3353271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               112-329
               

               Cow position:
               chr9:29339198-29339403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               74, 27
               

               Conread position:
               112-331
               

               Cow position:
               chr9:38645216-38645435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               63, 98
               

               Conread position:
               112-331
               

               Cow position:
               chr9:52598597-52598812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               114-300
               

               Cow position:
               chr9:35930311-35930496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               77, 17
               

               Conread position:
               114-323
               

               Cow position:
               chr9:20755630-20755839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               14, 154
               

               Conread position:
               114-330
               

               Cow position:
               chr9:42478357-42478572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               6, 39
               

               Conread position:
               116-278
               

               Cow position:
               chr9:8306976-8306816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               36, 62
               

               Conread position:
               117-331
               

               Cow position:
               chr9:11068349-11068572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               116, 54
               

               Conread position:
               119-323
               

               Cow position:
               chr9:1877887-1878085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               5, 63
               

               Conread position:
               119-323
               

               Cow position:
               chr9:10819712-10819911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               6, 54
               

               Conread position:
               120-329
               

               Cow position:
               chr9:23261552-23261344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               71, 142
               

               Conread position:
               121-236
               

               Cow position:
               chr9:9090245-9090361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               121-244
               

               Cow position:
               chr9:31270897-31270775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               119, 59
               

               Conread position:
               121-289
               

               Cow position:
               chr9:60081023-60080853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               98, 51
               

               Conread position:
               121-323
               

               Cow position:
               chr9:3343860-3343666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               50, 18
               

               Conread position:
               121-323
               

               Cow position:
               chr9:22443510-22443710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               121-323
               

               Cow position:
               chr9:33584565-33584768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               51, 65
               

               Conread position:
               121-323
               

               Cow position:
               chr9:34410278-34410479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               121-323
               

               Cow position:
               chr9:34697188-34697382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               121-323
               

               Cow position:
               chr9:45728896-45728696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               121-329
               

               Cow position:
               chr9:64637662-64637463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               121-331
               

               Cow position:
               chr9:5263619-5263408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 127
               

               Conread position:
               121-331
               

               Cow position:
               chr9:18426034-18425819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               60, 31
               

               Conread position:
               122-311
               

               Cow position:
               chr9:21080679-21080492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               122-322
               

               Cow position:
               chr9:38941315-38941514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               124-322
               

               Cow position:
               chr9:9358927-9358728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               35, 101
               

               Conread position:
               124-330
               

               Cow position:
               chr9:50310659-50310849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               125-316
               

               Cow position:
               chr9:23955870-23956056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               125-323
               

               Cow position:
               chr9:23788551-23788356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               125-330
               

               Cow position:
               chr9:22461627-22461823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               55, 111
               

               Conread position:
               125-331
               

               Cow position:
               chr9:46664935-46664732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               169, 45
               

               Conread position:
               127-262
               

               Cow position:
               chr9:3371677-3371545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               127-334
               

               Cow position:
               chr9:26310620-26310411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               65, 123
               

               Conread position:
               127-340
               

               Cow position:
               chr9:51557381-51557584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               209, 48
               

               Conread position:
               128-323
               

               Cow position:
               chr9:28379080-28378885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 46
               

               Conread position:
               129-328
               

               Cow position:
               chr9:28754929-28754729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               130-330
               

               Cow position:
               chr9:32981963-32982165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               131-309
               

               Cow position:
               chr9:40776905-40776729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               134-330
               

               Cow position:
               chr9:25400092-25400289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               52, 85
               

               Conread position:
               134-332
               

               Cow position:
               chr9:29194918-29195116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               135-265
               

               Cow position:
               chr9:35592117-35591986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               47, 67
               

               Conread position:
               136-293
               

               Cow position:
               chr9:35547374-35547215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               136-298
               

               Cow position:
               chr9:41799266-41799434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               136-315
               

               Cow position:
               chr9:42298286-42298117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               136-323
               

               Cow position:
               chr9:45171116-45171306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               136-331
               

               Cow position:
               chr9:55532917-55532724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               138-325
               

               Cow position:
               chr9:5649868-5650057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               18, 117
               

               Conread position:
               139-323
               

               Cow position:
               chr9:18827955-18828137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               139-329
               

               Cow position:
               chr9:38624525-38624713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               140-323
               

               Cow position:
               chr9:6954148-6954333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               140-331
               

               Cow position:
               chr9:41781752-41781563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               155
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               140-356
               

               Cow position:
               chr9:62459467-62459250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               43, 63
               

               Conread position:
               141-300
               

               Cow position:
               chr9:13761200-13761039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               141-331
               

               Cow position:
               chr9:64064259-64064454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               143-331
               

               Cow position:
               chr9:17840579-17840769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               144-331
               

               Cow position:
               chr9:23797331-23797144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               42, 13
               

               Conread position:
               144-331
               

               Cow position:
               chr9:37199218-37199035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               181, 26
               

               Conread position:
               144-331
               

               Cow position:
               chr9:43342424-43342240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               46, 16
               

               Conread position:
               145-323
               

               Cow position:
               chr9:5342158-5342330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               145-323
               

               Cow position:
               chr9:5469956-5469787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               138, 31
               

               Conread position:
               145-331
               

               Cow position:
               chr9:35832522-35832709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               42, 171
               

               Conread position:
               146-323
               

               Cow position:
               chr9:8834037-8834210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 81
               

               Conread position:
               146-331
               

               Cow position:
               chr9:21383860-21384045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               148, 26
               

               Conread position:
               147-321
               

               Cow position:
               chr9:38289233-38289404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               163, 94
               

               Conread position:
               148-323
               

               Cow position:
               chr9:5163893-5164068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 101
               

               Conread position:
               148-333
               

               Cow position:
               chr9:9624919-9625106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               24, 100
               

               Conread position:
               149-329
               

               Cow position:
               chr9:29819805-29819630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               151-323
               

               Cow position:
               chr9:24652499-24652320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               153-331
               

               Cow position:
               chr9:5110946-5110766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-330
               

               Cow position:
               chr9:7805880-7806051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               156-330
               

               Cow position:
               chr9:33838228-33838407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               156-331
               

               Cow position:
               chr9:9686331-9686503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               162-330
               

               Cow position:
               chr9:24429017-24429186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               164-323
               

               Cow position:
               chr9:12337983-12337819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               167-323
               

               Cow position:
               chr9:39315920-39315770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               174-321
               

               Cow position:
               chr9:26859414-26859274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               175-323
               

               Cow position:
               chr9:8992115-8992263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               123, 8
               

               Conread position:
               176-332
               

               Cow position:
               chr9:52258002-52258154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 71
               

               Conread position:
               176-336
               

               Cow position:
               chr9:36628181-36628023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               177-322
               

               Cow position:
               chr9:32348749-32348896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               177-331
               

               Cow position:
               chr9:23970833-23970990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               180-322
               

               Cow position:
               chr9:55494926-55495068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               180-323
               

               Cow position:
               chr9:19758779-19758637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               180-331
               

               Cow position:
               chr9:47214485-47214637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               183-318
               

               Cow position:
               chr9:33347433-33347568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               183-323
               

               Cow position:
               chr9:52763703-52763843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               183-323
               

               Cow position:
               chr9:58368940-58369079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               183-331
               

               Cow position:
               chr9:34973655-34973804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               183-331
               

               Cow position:
               chr9:39758575-39758427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               184-322
               

               Cow position:
               chr9:5072782-5072915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               184-323
               

               Cow position:
               chr9:31098828-31098969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               184-331
               

               Cow position:
               chr9:41964679-41964825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               184-331
               

               Cow position:
               chr9:56827537-56827383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               185-331
               

               Cow position:
               chr9:34484650-34484503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               186-331
               

               Cow position:
               chr9:59699493-59699639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               189-329
               

               Cow position:
               chr9:25628135-25627995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               121, 15
               

               Conread position:
               190-323
               

               Cow position:
               chr9:25375686-25375817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               190-330
               

               Cow position:
               chr9:13742573-13742433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               192-310
               

               Cow position:
               chr9:48157126-48157009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               193-323
               

               Cow position:
               chr9:20637419-20637291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               194-331
               

               Cow position:
               chr9:11427708-11427568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               194-331
               

               Cow position:
               chr9:27345538-27345676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               126, 116
               

               Conread position:
               195-336
               

               Cow position:
               chr9:54051819-54051681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               195-336
               

               Cow position:
               chr9:60355167-60355311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               197-331
               

               Cow position:
               chr9:6293638-6293503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               198-322
               

               Cow position:
               chr9:34014207-34014331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               198-331
               

               Cow position:
               chr9:24243679-24243816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               204-331
               

               Cow position:
               chr9:52807369-52807496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               118, 17
               

               Conread position:
               208-323
               

               Cow position:
               chr9:35793709-35793594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               210-323
               

               Cow position:
               chr9:34707282-34707394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               211-331
               

               Cow position:
               chr9:34135745-34135626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               216-331
               

               Cow position:
               chr9:36401641-36401756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               216-370
               

               Cow position:
               chr9:2951481-2951644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               224-330
               

               Cow position:
               chr9:34917168-34917276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               7, 0
               
Show alignments to all cow chromosomes.
Conread position:	7-331
Cow position:	chr9:30477539-30477866 (view UCSC Genome Browser custom track)
Alignm length:	332
Alignm identity:	241
Alignm E-value:	0
Alignm gaps (pig, cow):	67, 178
Conread position:	10-298
Cow position:	chr9:17928994-17928699 (view UCSC Genome Browser custom track)
Alignm length:	298
Alignm identity:	201
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	33, 24
Conread position:	10-331
Cow position:	chr9:7410004-7409671 (view UCSC Genome Browser custom track)
Alignm length:	338
Alignm identity:	235
Alignm E-value:	6e-39
Alignm gaps (pig, cow):	47, 24
Conread position:	10-336
Cow position:	chr9:17799872-17799534 (view UCSC Genome Browser custom track)
Alignm length:	344
Alignm identity:	235
Alignm E-value:	1e-36
Alignm gaps (pig, cow):	45, 289
Conread position:	11-322
Cow position:	chr9:42062356-42062017 (view UCSC Genome Browser custom track)
Alignm length:	341
Alignm identity:	240
Alignm E-value:	4e-36
Alignm gaps (pig, cow):	45, 21
Conread position:	23-331
Cow position:	chr9:10308780-10309086 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	237
Alignm E-value:	7.00005e-41
Alignm gaps (pig, cow):	38, 7
Conread position:	27-323
Cow position:	chr9:31347179-31346867 (view UCSC Genome Browser custom track)
Alignm length:	316
Alignm identity:	220
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	47, 76
Conread position:	27-331
Cow position:	chr9:8338255-8337936 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	227
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	41, 95
Conread position:	27-333
Cow position:	chr9:29684362-29684052 (view UCSC Genome Browser custom track)
Alignm length:	317
Alignm identity:	213
Alignm E-value:	7e-31
Alignm gaps (pig, cow):	79, 18
Conread position:	29-287
Cow position:	chr9:35904528-35904792 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	186
Alignm E-value:	8e-32
Alignm gaps (pig, cow):	88, 45
Conread position:	29-313
Cow position:	chr9:49417205-49416914 (view UCSC Genome Browser custom track)
Alignm length:	295
Alignm identity:	215
Alignm E-value:	4.2039e-45
Alignm gaps (pig, cow):	79, 15
Conread position:	29-322
Cow position:	chr9:32371538-32371833 (view UCSC Genome Browser custom track)
Alignm length:	307
Alignm identity:	222
Alignm E-value:	2e-40
Alignm gaps (pig, cow):	42, 150
Conread position:	29-328
Cow position:	chr9:388792-389105 (view UCSC Genome Browser custom track)
Alignm length:	321
Alignm identity:	226
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	41, 142
Conread position:	29-331
Cow position:	chr9:3070200-3070501 (view UCSC Genome Browser custom track)
Alignm length:	316
Alignm identity:	229
Alignm E-value:	7.00005e-41
Alignm gaps (pig, cow):	79, 43
Conread position:	29-336
Cow position:	chr9:42445759-42446082 (view UCSC Genome Browser custom track)
Alignm length:	324
Alignm identity:	252
Alignm E-value:	0
Alignm gaps (pig, cow):	45, 0
Conread position:	31-238
Cow position:	chr9:30749364-30749587 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	159
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	42, 156
Conread position:	31-246
Cow position:	chr9:26390989-26390764 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	167
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	27, 153
Conread position:	31-280
Cow position:	chr9:48106899-48107156 (view UCSC Genome Browser custom track)
Alignm length:	262
Alignm identity:	186
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	40, 115
Conread position:	31-293
Cow position:	chr9:31077457-31077723 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	175
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	43, 91
Conread position:	31-296
Cow position:	chr9:20989233-20989514 (view UCSC Genome Browser custom track)
Alignm length:	291
Alignm identity:	202
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	40, 143