Cow genome map
| Conread name: | Pla1-C0000023_J16 |
| Conread position: | 145-405 |
| Cow position: | chr14:9046691-9046415 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 161-401 |
| Cow position: | chr14:2295364-2295131 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 95 |
| Conread position: | 181-393 |
| Cow position: | chr14:29775006-29775226 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 72, 29 |
| Conread position: | 182-405 |
| Cow position: | chr14:21745174-21744938 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 193-401 |
| Cow position: | chr14:15274775-15275008 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 193-405 |
| Cow position: | chr14:751630-751403 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chr14:1659519-1659293 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chr14:10147938-10147711 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chr14:12124119-12124346 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chr14:27978419-27978198 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 194-366 |
| Cow position: | chr14:28244613-28244795 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 14, 127 |
| Conread position: | 194-397 |
| Cow position: | chr14:12611474-12611276 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 194-397 |
| Cow position: | chr14:25365424-25365641 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 194-397 |
| Cow position: | chr14:43556036-43555822 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 17, 197 |
| Conread position: | 194-400 |
| Cow position: | chr14:37454867-37455070 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 194-400 |
| Cow position: | chr14:38148061-38147847 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 111 |
| Conread position: | 194-401 |
| Cow position: | chr14:35384764-35384972 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 79, 110 |
| Conread position: | 194-401 |
| Cow position: | chr14:44227439-44227217 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 104 |
| Conread position: | 194-401 |
| Cow position: | chr14:46391475-46391689 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 110 |
| Conread position: | 194-402 |
| Cow position: | chr14:40342123-40341898 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 14, 200 |
| Conread position: | 194-405 |
| Cow position: | chr14:13462584-13462357 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 194-405 |
| Cow position: | chr14:40168673-40168894 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 113 |
| Conread position: | 197-403 |
| Cow position: | chr14:44255699-44255918 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 112 |
| Conread position: | 202-396 |
| Cow position: | chr14:44774987-44775192 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 36, 120 |
| Conread position: | 202-396 |
| Cow position: | chr14:48826334-48826133 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 202-397 |
| Cow position: | chr14:13579437-13579239 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 55, 96 |
| Conread position: | 205-378 |
| Cow position: | chr14:17687547-17687361 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 205-388 |
| Cow position: | chr14:50139615-50139421 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 132 |
| Conread position: | 205-392 |
| Cow position: | chr14:32448013-32447813 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 101 |
| Conread position: | 205-395 |
| Cow position: | chr14:45086291-45086089 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 41, 111 |
| Conread position: | 205-397 |
| Cow position: | chr14:16272245-16272448 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 41, 122 |
| Conread position: | 205-400 |
| Cow position: | chr14:17759837-17760037 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 205-400 |
| Cow position: | chr14:45710678-45710881 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 45, 113 |
| Conread position: | 205-401 |
| Cow position: | chr14:191096-190886 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 205-401 |
| Cow position: | chr14:2951522-2951718 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 205-401 |
| Cow position: | chr14:5513981-5513779 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 101 |
| Conread position: | 205-401 |
| Cow position: | chr14:5530108-5529903 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 205-401 |
| Cow position: | chr14:7473402-7473192 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-401 |
| Cow position: | chr14:11153099-11153310 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 205-401 |
| Cow position: | chr14:13304003-13303800 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 99 |
| Conread position: | 205-401 |
| Cow position: | chr14:17000006-17000216 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-401 |
| Cow position: | chr14:19327212-19327420 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 41, 111 |
| Conread position: | 205-401 |
| Cow position: | chr14:20783518-20783297 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 205-401 |
| Cow position: | chr14:22030395-22030603 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 114 |
| Conread position: | 205-401 |
| Cow position: | chr14:30736221-30736013 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 205-401 |
| Cow position: | chr14:33678114-33677910 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 205-401 |
| Cow position: | chr14:43559286-43559077 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 205-401 |
| Cow position: | chr14:44690122-44689912 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 205-401 |
| Cow position: | chr14:45082106-45081896 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 205-401 |
| Cow position: | chr14:48253264-48253472 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 20 |
| Conread position: | 205-401 |
| Cow position: | chr14:50111852-50111636 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-403 |
| Cow position: | chr14:13274656-13274448 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 205-403 |
| Cow position: | chr14:13863046-13863257 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 39, 109 |
| Conread position: | 205-403 |
| Cow position: | chr14:46637598-46637390 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 205-405 |
| Cow position: | chr14:16918667-16918880 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 105 |
| Conread position: | 205-405 |
| Cow position: | chr14:17490407-17490621 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 205-405 |
| Cow position: | chr14:23256313-23256517 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 105 |
| Conread position: | 205-405 |
| Cow position: | chr14:46466718-46466521 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 51, 117 |
| Conread position: | 216-405 |
| Cow position: | chr14:13620102-13620303 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 221-401 |
| Cow position: | chr14:48601302-48601496 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 221-405 |
| Cow position: | chr14:29046658-29046847 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 226-401 |
| Cow position: | chr14:37225223-37225033 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 229-401 |
| Cow position: | chr14:12900114-12899938 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 47, 10 |
| Conread position: | 233-405 |
| Cow position: | chr14:12742049-12742230 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.