Cow genome map

Conread name: Pla1-C0000023_J16

Conread position: 106-401
Cow position: chr16:1432989-1432691 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 10

Conread position: 176-405
Cow position: chr16:5662572-5662331 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 16

Conread position: 191-375
Cow position: chr16:9931457-9931269 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 113

Conread position: 191-403
Cow position: chr16:27714098-27714314 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 126

Conread position: 193-366
Cow position: chr16:7465038-7464852 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 193-397
Cow position: chr16:19080689-19080470 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 193-397
Cow position: chr16:19778930-19779148 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 193-401
Cow position: chr16:838037-837817 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 124

Conread position: 193-401
Cow position: chr16:10438977-10438752 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 193-401
Cow position: chr16:47474974-47474758 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 112

Conread position: 193-404
Cow position: chr16:28196522-28196748 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr16:33250-33024 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr16:10374877-10375103 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr16:11284315-11284088 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr16:21186338-21186111 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr16:25189364-25189144 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 15, 35

Conread position: 193-405
Cow position: chr16:27594226-27594003 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr16:28169631-28169857 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 116

Conread position: 194-353
Cow position: chr16:16229038-16228872 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 194-391
Cow position: chr16:16520046-16520253 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 92

Conread position: 194-396
Cow position: chr16:23671424-23671202 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 194-396
Cow position: chr16:25456759-25456973 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 123

Conread position: 194-401
Cow position: chr16:2482416-2482639 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 50, 0

Conread position: 194-401
Cow position: chr16:7675731-7675958 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 115

Conread position: 194-401
Cow position: chr16:15185796-15185572 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 9, 0

Conread position: 194-401
Cow position: chr16:16270412-16270634 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 194-401
Cow position: chr16:25086335-25086117 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 59, 145

Conread position: 194-401
Cow position: chr16:25258540-25258325 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 14, 129

Conread position: 194-401
Cow position: chr16:49221182-49221383 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 137, 21

Conread position: 194-403
Cow position: chr16:3330657-3330435 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 14, 129

Conread position: 194-405
Cow position: chr16:23809041-23808824 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 117

Conread position: 194-405
Cow position: chr16:25001576-25001797 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 105

Conread position: 194-405
Cow position: chr16:26664474-26664248 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 194-405
Cow position: chr16:37455293-37455506 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 25

Conread position: 195-395
Cow position: chr16:26105331-26105554 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 203-397
Cow position: chr16:49233925-49234128 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 205-359
Cow position: chr16:32937228-32937068 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 117

Conread position: 205-397
Cow position: chr16:54324630-54324831 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 35, 100

Conread position: 205-400
Cow position: chr16:49255521-49255728 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 149

Conread position: 205-401
Cow position: chr16:2238058-2238251 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 72

Conread position: 205-401
Cow position: chr16:5485435-5485231 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 149

Conread position: 205-401
Cow position: chr16:8815395-8815604 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 41, 110

Conread position: 205-401
Cow position: chr16:14665103-14665309 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 167

Conread position: 205-401
Cow position: chr16:15477549-15477343 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 131

Conread position: 205-401
Cow position: chr16:15567966-15567756 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 112

Conread position: 205-401
Cow position: chr16:23251718-23251937 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 70

Conread position: 205-401
Cow position: chr16:23535184-23535390 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 205-401
Cow position: chr16:23984006-23983796 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr16:27732676-27732879 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 41, 100

Conread position: 205-401
Cow position: chr16:28470364-28470574 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr16:29047731-29047522 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 205-401
Cow position: chr16:31591208-31591416 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 205-401
Cow position: chr16:40295454-40295674 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 205-401
Cow position: chr16:43896554-43896774 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 205-402
Cow position: chr16:5890707-5890496 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 122

Conread position: 205-403
Cow position: chr16:3088494-3088708 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 205-403
Cow position: chr16:4478265-4478473 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 109

Conread position: 205-403
Cow position: chr16:17056268-17056473 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 120

Conread position: 205-403
Cow position: chr16:25442337-25442124 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 205-405
Cow position: chr16:406331-406544 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 41, 116

Conread position: 205-405
Cow position: chr16:3918775-3918561 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 205-405
Cow position: chr16:40557239-40557451 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 71, 34

Conread position: 206-401
Cow position: chr16:1566748-1566955 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 70, 0

Conread position: 206-405
Cow position: chr16:51084860-51084647 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 86

Conread position: 210-397
Cow position: chr16:26978824-26978632 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 47, 95

Conread position: 214-397
Cow position: chr16:42735707-42735888 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 35, 23

Conread position: 216-397
Cow position: chr16:16898147-16897961 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 109

Conread position: 216-397
Cow position: chr16:56916373-56916568 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 94

Conread position: 232-401
Cow position: chr16:41165975-41166146 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 45, 84

Conread position: 232-403
Cow position: chr16:29984749-29984576 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 21

Show alignments to all cow chromosomes.