Cow genome map

Conread name: Pla1-C0000023_J16

Conread position: 5-205
Cow position: chr17:1705645-1705450 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 197, 31

Conread position: 145-405
Cow position: chr17:14215685-14215960 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 17

Conread position: 168-405
Cow position: chr17:23323133-23323385 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 38

Conread position: 183-403
Cow position: chr17:1656544-1656781 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 96

Conread position: 191-400
Cow position: chr17:22559264-22559042 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 121

Conread position: 193-384
Cow position: chr17:15372517-15372309 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 193-392
Cow position: chr17:20403712-20403510 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 81

Conread position: 193-401
Cow position: chr17:150598-150813 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 9

Conread position: 193-401
Cow position: chr17:1786668-1786882 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 99

Conread position: 193-403
Cow position: chr17:6121003-6120784 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 78

Conread position: 193-405
Cow position: chr17:182869-182643 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr17:9080127-9080354 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr17:11784151-11783921 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr17:15437077-15436849 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr17:20389792-20390019 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr17:21769713-21769940 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr17:24783455-24783229 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr17:34157415-34157187 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr17:39049508-39049281 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 194-401
Cow position: chr17:4083310-4083094 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 60

Conread position: 194-401
Cow position: chr17:6069842-6069622 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 194-401
Cow position: chr17:8203231-8203026 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 54

Conread position: 194-405
Cow position: chr17:31766744-31766972 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 194-405
Cow position: chr17:33284553-33284766 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 14, 61

Conread position: 202-397
Cow position: chr17:21418846-21418648 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 73

Conread position: 203-405
Cow position: chr17:6611203-6611420 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 204-405
Cow position: chr17:3655011-3655226 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 205-397
Cow position: chr17:2077714-2077921 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 43, 14

Conread position: 205-399
Cow position: chr17:43989784-43989575 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 205-401
Cow position: chr17:4061385-4061169 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 205-401
Cow position: chr17:11086443-11086655 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr17:14039765-14039970 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 48, 7

Conread position: 205-401
Cow position: chr17:15851973-15851760 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr17:16121301-16121482 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 126, 45

Conread position: 205-401
Cow position: chr17:19267547-19267755 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 205-401
Cow position: chr17:20080600-20080800 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 100

Conread position: 205-401
Cow position: chr17:20086485-20086693 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 48, 192

Conread position: 205-401
Cow position: chr17:24028719-24028931 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 39, 109

Conread position: 205-401
Cow position: chr17:40806089-40805879 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 90

Conread position: 205-403
Cow position: chr17:6261141-6260929 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 116

Conread position: 205-405
Cow position: chr17:2580902-2580692 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 205-405
Cow position: chr17:14240785-14240566 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 205-405
Cow position: chr17:15142075-15142288 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 15

Conread position: 205-405
Cow position: chr17:27793497-27793711 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 206-403
Cow position: chr17:20099193-20099399 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 46, 118

Conread position: 211-401
Cow position: chr17:54171-54373 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 37, 98

Conread position: 211-401
Cow position: chr17:13675016-13675217 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 46

Conread position: 214-401
Cow position: chr17:19020847-19020650 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 123

Conread position: 217-401
Cow position: chr17:42266672-42266488 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 112, 15

Conread position: 221-403
Cow position: chr17:2149695-2149511 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 15

Conread position: 225-397
Cow position: chr17:15325095-15324905 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 226-397
Cow position: chr17:23038832-23038655 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 226-400
Cow position: chr17:16856258-16856446 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 20, 0

Show alignments to all cow chromosomes.