Cow genome map
Conread name: | Pla1-C0000023_J16 |
Conread position: | 5-205 |
Cow position: | chr17:1705645-1705450 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 148 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 197, 31 |
Conread position: | 145-405 |
Cow position: | chr17:14215685-14215960 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 189 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 49, 17 |
Conread position: | 168-405 |
Cow position: | chr17:23323133-23323385 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 175 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 26, 38 |
Conread position: | 183-403 |
Cow position: | chr17:1656544-1656781 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 169 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 22, 96 |
Conread position: | 191-400 |
Cow position: | chr17:22559264-22559042 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 161 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 20, 121 |
Conread position: | 193-384 |
Cow position: | chr17:15372517-15372309 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 151 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-392 |
Cow position: | chr17:20403712-20403510 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 149 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 15, 81 |
Conread position: | 193-401 |
Cow position: | chr17:150598-150813 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 154 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 53, 9 |
Conread position: | 193-401 |
Cow position: | chr17:1786668-1786882 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 166 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 15, 99 |
Conread position: | 193-403 |
Cow position: | chr17:6121003-6120784 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 159 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 15, 78 |
Conread position: | 193-405 |
Cow position: | chr17:182869-182643 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 158 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-405 |
Cow position: | chr17:9080127-9080354 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 163 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-405 |
Cow position: | chr17:11784151-11783921 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 162 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-405 |
Cow position: | chr17:15437077-15436849 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 169 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-405 |
Cow position: | chr17:20389792-20390019 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 166 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-405 |
Cow position: | chr17:21769713-21769940 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 163 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-405 |
Cow position: | chr17:24783455-24783229 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 165 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-405 |
Cow position: | chr17:34157415-34157187 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 163 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-405 |
Cow position: | chr17:39049508-39049281 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 163 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 194-401 |
Cow position: | chr17:4083310-4083094 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 160 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 14, 60 |
Conread position: | 194-401 |
Cow position: | chr17:6069842-6069622 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 169 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 194-401 |
Cow position: | chr17:8203231-8203026 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 146 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 14, 54 |
Conread position: | 194-405 |
Cow position: | chr17:31766744-31766972 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 160 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 194-405 |
Cow position: | chr17:33284553-33284766 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 161 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 14, 61 |
Conread position: | 202-397 |
Cow position: | chr17:21418846-21418648 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 144 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 48, 73 |
Conread position: | 203-405 |
Cow position: | chr17:6611203-6611420 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 157 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 204-405 |
Cow position: | chr17:3655011-3655226 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 154 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 205-397 |
Cow position: | chr17:2077714-2077921 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 163 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 43, 14 |
Conread position: | 205-399 |
Cow position: | chr17:43989784-43989575 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 155 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 205-401 |
Cow position: | chr17:4061385-4061169 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 163 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 205-401 |
Cow position: | chr17:11086443-11086655 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 163 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 205-401 |
Cow position: | chr17:14039765-14039970 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 159 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 48, 7 |
Conread position: | 205-401 |
Cow position: | chr17:15851973-15851760 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 161 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 205-401 |
Cow position: | chr17:16121301-16121482 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 152 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 126, 45 |
Conread position: | 205-401 |
Cow position: | chr17:19267547-19267755 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 156 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 205-401 |
Cow position: | chr17:20080600-20080800 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 154 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 45, 100 |
Conread position: | 205-401 |
Cow position: | chr17:20086485-20086693 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 165 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 48, 192 |
Conread position: | 205-401 |
Cow position: | chr17:24028719-24028931 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 168 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 39, 109 |
Conread position: | 205-401 |
Cow position: | chr17:40806089-40805879 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 154 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 41, 90 |
Conread position: | 205-403 |
Cow position: | chr17:6261141-6260929 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 161 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 30, 116 |
Conread position: | 205-405 |
Cow position: | chr17:2580902-2580692 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 155 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 205-405 |
Cow position: | chr17:14240785-14240566 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 170 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 205-405 |
Cow position: | chr17:15142075-15142288 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 151 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 50, 15 |
Conread position: | 205-405 |
Cow position: | chr17:27793497-27793711 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 158 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 206-403 |
Cow position: | chr17:20099193-20099399 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 164 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 46, 118 |
Conread position: | 211-401 |
Cow position: | chr17:54171-54373 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 151 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 37, 98 |
Conread position: | 211-401 |
Cow position: | chr17:13675016-13675217 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 148 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 63, 46 |
Conread position: | 214-401 |
Cow position: | chr17:19020847-19020650 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 142 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 38, 123 |
Conread position: | 217-401 |
Cow position: | chr17:42266672-42266488 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 139 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 112, 15 |
Conread position: | 221-403 |
Cow position: | chr17:2149695-2149511 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 138 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 43, 15 |
Conread position: | 225-397 |
Cow position: | chr17:15325095-15324905 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 143 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 226-397 |
Cow position: | chr17:23038832-23038655 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 133 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 226-400 |
Cow position: | chr17:16856258-16856446 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 140 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 20, 0 |
Show alignments to all cow chromosomes.