Cow genome map

Conread name: Pla1-C0000023_J16

Conread position: 116-368
Cow position: chr2:64768170-64768416 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 17

Conread position: 136-405
Cow position: chr2:5903334-5903598 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 10, 61

Conread position: 145-401
Cow position: chr2:281687-281964 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 42

Conread position: 145-401
Cow position: chr2:16901252-16900986 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 47

Conread position: 145-405
Cow position: chr2:10610648-10610923 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 10, 50

Conread position: 146-391
Cow position: chr2:72681127-72681372 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 20

Conread position: 193-399
Cow position: chr2:41048101-41048321 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 34

Conread position: 193-399
Cow position: chr2:49628726-49628506 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 116

Conread position: 193-401
Cow position: chr2:6962462-6962244 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 15, 120

Conread position: 193-401
Cow position: chr2:72187553-72187760 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 7, 56

Conread position: 193-403
Cow position: chr2:3323616-3323837 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 193-403
Cow position: chr2:54738438-54738212 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr2:9958124-9958344 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 61

Conread position: 193-405
Cow position: chr2:25028348-25028569 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 125

Conread position: 193-405
Cow position: chr2:26904807-26905031 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 125

Conread position: 193-405
Cow position: chr2:26922376-26922149 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr2:39422574-39422347 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr2:47037484-47037711 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 114

Conread position: 193-405
Cow position: chr2:57336495-57336268 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 194-379
Cow position: chr2:32458111-32458299 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 49

Conread position: 194-391
Cow position: chr2:24471683-24471889 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 165
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 194-391
Cow position: chr2:78743516-78743318 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 36

Conread position: 194-394
Cow position: chr2:51618208-51617985 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 194-397
Cow position: chr2:28619016-28619224 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 152

Conread position: 194-397
Cow position: chr2:55483201-55483420 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 194-400
Cow position: chr2:36052076-36052285 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 31

Conread position: 194-401
Cow position: chr2:1691915-1691696 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 194-401
Cow position: chr2:2087217-2087439 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 194-401
Cow position: chr2:16074587-16074805 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 20

Conread position: 194-401
Cow position: chr2:28613384-28613607 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 33

Conread position: 194-401
Cow position: chr2:28639895-28640117 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 194-401
Cow position: chr2:28794189-28793974 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 26

Conread position: 194-401
Cow position: chr2:42669758-42669978 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 154

Conread position: 194-401
Cow position: chr2:45938744-45938955 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 58

Conread position: 194-401
Cow position: chr2:47811798-47811575 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 194-402
Cow position: chr2:49605883-49605667 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 31

Conread position: 194-403
Cow position: chr2:19225822-19225604 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 14, 71

Conread position: 194-405
Cow position: chr2:6880302-6880080 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 195-401
Cow position: chr2:38374727-38374514 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 7

Conread position: 202-405
Cow position: chr2:52617415-52617198 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 204-395
Cow position: chr2:15575915-15576106 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 11

Conread position: 204-405
Cow position: chr2:32434384-32434594 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 105

Conread position: 205-369
Cow position: chr2:33794929-33795102 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 104

Conread position: 205-375
Cow position: chr2:78763570-78763390 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 205-377
Cow position: chr2:32065101-32065287 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 205-383
Cow position: chr2:44990369-44990549 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 123

Conread position: 205-391
Cow position: chr2:52063696-52063504 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 205-397
Cow position: chr2:19012299-19012085 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 205-398
Cow position: chr2:54693885-54693692 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 134

Conread position: 205-400
Cow position: chr2:10185290-10185500 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr2:174628-174832 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 111

Conread position: 205-401
Cow position: chr2:8119480-8119271 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 21

Conread position: 205-401
Cow position: chr2:10264470-10264677 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 126

Conread position: 205-401
Cow position: chr2:12223341-12223547 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 48

Conread position: 205-401
Cow position: chr2:13044776-13044986 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr2:24925505-24925292 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr2:25743479-25743266 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr2:28648668-28648875 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 112

Conread position: 205-401
Cow position: chr2:31298726-31298518 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 8

Conread position: 205-401
Cow position: chr2:32656581-32656373 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 104

Conread position: 205-401
Cow position: chr2:34563738-34563935 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 123

Conread position: 205-401
Cow position: chr2:43445884-43445678 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 0

Conread position: 205-401
Cow position: chr2:65937296-65937505 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 113

Conread position: 205-401
Cow position: chr2:80291827-80292026 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 165
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 73, 42

Conread position: 205-402
Cow position: chr2:34052094-34051883 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 205-402
Cow position: chr2:35356940-35356742 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 42

Conread position: 205-403
Cow position: chr2:364131-364344 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 205-403
Cow position: chr2:574526-574317 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 107

Conread position: 205-403
Cow position: chr2:6674166-6673960 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 63

Conread position: 205-403
Cow position: chr2:11158183-11158398 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 205-403
Cow position: chr2:25887613-25887823 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 108

Conread position: 205-403
Cow position: chr2:53330701-53330486 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 41, 112

Conread position: 205-405
Cow position: chr2:3834033-3834242 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 10

Conread position: 205-405
Cow position: chr2:9908850-9908637 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 104

Conread position: 205-405
Cow position: chr2:17424795-17424575 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 205-405
Cow position: chr2:42331954-42332168 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 205-405
Cow position: chr2:44934050-44934257 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 144

Conread position: 205-405
Cow position: chr2:47602328-47602543 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 205-405
Cow position: chr2:53540875-53540661 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 205-405
Cow position: chr2:59412756-59412970 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 207-380
Cow position: chr2:16291622-16291434 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 219-403
Cow position: chr2:22078691-22078512 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 79, 23

Conread position: 229-403
Cow position: chr2:24147769-24147587 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 85

Conread position: 231-405
Cow position: chr2:14209895-14210075 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 20

Conread position: 235-405
Cow position: chr2:2411895-2412073 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 237-401
Cow position: chr2:50982453-50982629 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 77

Show alignments to all cow chromosomes.