Cow genome map
| Conread name: | Pla1-C0000023_J16 |
| Conread position: | 145-401 |
| Cow position: | chr21:10851704-10851443 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 181-401 |
| Cow position: | chr21:37372827-37372596 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 191-397 |
| Cow position: | chr21:20743044-20743252 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 11 |
| Conread position: | 193-365 |
| Cow position: | chr21:6626112-6625929 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-392 |
| Cow position: | chr21:2417792-2417581 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 117 |
| Conread position: | 193-399 |
| Cow position: | chr21:42914944-42914725 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chr21:2512428-2512201 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chr21:4185498-4185279 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 16, 192 |
| Conread position: | 193-405 |
| Cow position: | chr21:12054438-12054663 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chr21:26635578-26635802 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 15, 113 |
| Conread position: | 193-405 |
| Cow position: | chr21:27035818-27036045 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chr21:34822631-34822858 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 194-393 |
| Cow position: | chr21:44639933-44640130 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 194-400 |
| Cow position: | chr21:27567324-27567128 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 15, 82 |
| Conread position: | 194-401 |
| Cow position: | chr21:361242-361032 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 101 |
| Conread position: | 194-401 |
| Cow position: | chr21:10568281-10568061 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 52, 123 |
| Conread position: | 194-401 |
| Cow position: | chr21:27285047-27284826 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 14, 117 |
| Conread position: | 194-401 |
| Cow position: | chr21:28736747-28736533 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 14, 169 |
| Conread position: | 194-401 |
| Cow position: | chr21:33253761-33253540 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 102 |
| Conread position: | 194-403 |
| Cow position: | chr21:40270094-40270317 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 168 |
| Conread position: | 202-405 |
| Cow position: | chr21:7064073-7063856 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 205-400 |
| Cow position: | chr21:3780340-3780129 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-400 |
| Cow position: | chr21:5018706-5018500 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 41, 154 |
| Conread position: | 205-401 |
| Cow position: | chr21:147490-147284 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 205-401 |
| Cow position: | chr21:27069394-27069606 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-401 |
| Cow position: | chr21:40682877-40683087 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 205-401 |
| Cow position: | chr21:45783042-45782841 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 205-401 |
| Cow position: | chr21:47646901-47646687 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 109 |
| Conread position: | 205-401 |
| Cow position: | chr21:47942515-47942305 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 205-402 |
| Cow position: | chr21:5012141-5012349 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 102 |
| Conread position: | 205-403 |
| Cow position: | chr21:2712484-2712291 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 48, 42 |
| Conread position: | 205-404 |
| Cow position: | chr21:11507180-11506967 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 205-405 |
| Cow position: | chr21:1286647-1286852 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 205-405 |
| Cow position: | chr21:31514748-31514962 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 206-405 |
| Cow position: | chr21:19612323-19612111 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 35, 102 |
| Conread position: | 212-405 |
| Cow position: | chr21:30597919-30598126 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 216-401 |
| Cow position: | chr21:5839706-5839905 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 233-401 |
| Cow position: | chr21:9893426-9893251 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 234-403 |
| Cow position: | chr21:30593-30428 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 237-400 |
| Cow position: | chr21:4588450-4588618 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 69 |
Show alignments to all cow chromosomes.