Cow genome map
| Conread name: | Pla1-C0000023_J16 |
| Conread position: | 136-402 |
| Cow position: | chr22:521927-522209 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 55 |
| Conread position: | 145-393 |
| Cow position: | chr22:35670210-35670470 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 145-401 |
| Cow position: | chr22:1880260-1879991 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 145-401 |
| Cow position: | chr22:18814909-18815178 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 23, 43 |
| Conread position: | 145-405 |
| Cow position: | chr22:538565-538287 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 145-405 |
| Cow position: | chr22:3276901-3277176 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 145-405 |
| Cow position: | chr22:37268623-37268349 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 50 |
| Conread position: | 181-405 |
| Cow position: | chr22:10908415-10908655 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 193-374 |
| Cow position: | chr22:13773928-13773738 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 193-397 |
| Cow position: | chr22:44348450-44348664 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 130 |
| Conread position: | 193-399 |
| Cow position: | chr22:6022072-6021854 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 15, 125 |
| Conread position: | 193-399 |
| Cow position: | chr22:7304246-7304466 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 193 |
| Conread position: | 193-399 |
| Cow position: | chr22:44492463-44492242 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-401 |
| Cow position: | chr22:12730288-12730500 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 193-401 |
| Cow position: | chr22:17327050-17327269 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 110 |
| Conread position: | 193-401 |
| Cow position: | chr22:21195089-21195304 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 16, 110 |
| Conread position: | 193-401 |
| Cow position: | chr22:35905982-35906203 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 14, 146 |
| Conread position: | 193-405 |
| Cow position: | chr22:695024-694805 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 193-405 |
| Cow position: | chr22:11803643-11803870 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chr22:18028696-18028469 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chr22:19536961-19536734 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chr22:24951965-24951738 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chr22:27308370-27308593 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 10, 132 |
| Conread position: | 194-379 |
| Cow position: | chr22:8736944-8737133 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 69, 8 |
| Conread position: | 194-381 |
| Cow position: | chr22:3305191-3305390 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 194-396 |
| Cow position: | chr22:33352079-33351872 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 14, 155 |
| Conread position: | 194-401 |
| Cow position: | chr22:1268346-1268573 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 194-401 |
| Cow position: | chr22:6501731-6501949 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 14, 135 |
| Conread position: | 194-401 |
| Cow position: | chr22:34169746-34169526 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 42, 116 |
| Conread position: | 194-401 |
| Cow position: | chr22:42992582-42992362 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 123 |
| Conread position: | 194-401 |
| Cow position: | chr22:44935375-44935157 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 194-405 |
| Cow position: | chr22:20239432-20239658 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 194-405 |
| Cow position: | chr22:23800810-23801020 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 194-405 |
| Cow position: | chr22:46580311-46580536 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 202-400 |
| Cow position: | chr22:44397829-44397621 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 205-333 |
| Cow position: | chr22:29011877-29012004 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 46 |
| Conread position: | 205-388 |
| Cow position: | chr22:16202308-16202111 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 205-388 |
| Cow position: | chr22:37292279-37292475 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 101 |
| Conread position: | 205-395 |
| Cow position: | chr22:46614698-46614496 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 205-396 |
| Cow position: | chr22:38550779-38550583 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 126, 93 |
| Conread position: | 205-397 |
| Cow position: | chr22:15852818-15852610 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 205-397 |
| Cow position: | chr22:45582310-45582107 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 205-400 |
| Cow position: | chr22:8120693-8120892 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 205-401 |
| Cow position: | chr22:1281339-1281532 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 44, 87 |
| Conread position: | 205-401 |
| Cow position: | chr22:3803576-3803370 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 205-401 |
| Cow position: | chr22:6333108-6332897 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-401 |
| Cow position: | chr22:6601850-6602046 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 205-401 |
| Cow position: | chr22:19142285-19142505 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-401 |
| Cow position: | chr22:19243792-19243589 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 44, 182 |
| Conread position: | 205-401 |
| Cow position: | chr22:31333649-31333860 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 205-401 |
| Cow position: | chr22:36185152-36184947 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 100 |
| Conread position: | 205-401 |
| Cow position: | chr22:36860153-36860352 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 41 |
| Conread position: | 205-401 |
| Cow position: | chr22:39468119-39468333 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-401 |
| Cow position: | chr22:46585169-46585378 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 116 |
| Conread position: | 205-405 |
| Cow position: | chr22:559310-559524 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-405 |
| Cow position: | chr22:1519625-1519836 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 167 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-405 |
| Cow position: | chr22:38960284-38960084 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 97 |
| Conread position: | 206-403 |
| Cow position: | chr22:21034996-21035205 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 207-401 |
| Cow position: | chr22:34600737-34600534 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 221-405 |
| Cow position: | chr22:325810-326006 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 248-401 |
| Cow position: | chr22:1323551-1323394 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 30, 5 |
Show alignments to all cow chromosomes.