Cow genome map

Conread name: Pla1-C0000023_J16

Conread position: 116-405
Cow position: chr29:32558262-32558562 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 17

Conread position: 187-402
Cow position: chr29:2747023-2747242 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 70

Conread position: 193-397
Cow position: chr29:35814553-35814772 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 193-401
Cow position: chr29:7845807-7845585 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 193-401
Cow position: chr29:34798394-34798610 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 193-401
Cow position: chr29:45461164-45460941 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr29:3176016-3176226 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 51

Conread position: 193-405
Cow position: chr29:3328756-3328529 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr29:8664930-8664703 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 193-405
Cow position: chr29:13622441-13622662 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 189

Conread position: 193-405
Cow position: chr29:18855528-18855755 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr29:27979503-27979730 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr29:31182825-31182599 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr29:42093182-42092955 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 194-372
Cow position: chr29:12793641-12793458 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 81

Conread position: 194-383
Cow position: chr29:40501582-40501785 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 161
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 14, 124

Conread position: 194-395
Cow position: chr29:30259122-30259327 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 81

Conread position: 194-400
Cow position: chr29:6264584-6264800 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 8, 163

Conread position: 194-401
Cow position: chr29:42803812-42803610 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 57

Conread position: 194-403
Cow position: chr29:609228-609447 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 172

Conread position: 194-403
Cow position: chr29:25931110-25931334 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 13, 116

Conread position: 195-400
Cow position: chr29:5981293-5981509 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 199

Conread position: 195-403
Cow position: chr29:14084715-14084933 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 17

Conread position: 202-401
Cow position: chr29:19655031-19654826 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 107

Conread position: 205-386
Cow position: chr29:16023968-16023774 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 188

Conread position: 205-396
Cow position: chr29:2101243-2101038 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 205-401
Cow position: chr29:2691567-2691364 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 104

Conread position: 205-401
Cow position: chr29:2839938-2840146 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 110

Conread position: 205-401
Cow position: chr29:5236425-5236216 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 185

Conread position: 205-401
Cow position: chr29:10646846-10647050 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 64

Conread position: 205-401
Cow position: chr29:14587323-14587117 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 105

Conread position: 205-401
Cow position: chr29:15997246-15997455 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 39, 116

Conread position: 205-401
Cow position: chr29:16345618-16345406 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr29:19621873-19622083 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr29:20252564-20252366 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 64

Conread position: 205-401
Cow position: chr29:21425614-21425817 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 205-401
Cow position: chr29:26163430-26163637 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 111

Conread position: 205-401
Cow position: chr29:32541505-32541294 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr29:38228382-38228177 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 151

Conread position: 205-401
Cow position: chr29:39078307-39078508 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 97

Conread position: 205-401
Cow position: chr29:45205915-45205698 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 20

Conread position: 205-403
Cow position: chr29:13583485-13583275 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 21

Conread position: 205-404
Cow position: chr29:42938788-42939000 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 206-333
Cow position: chr29:27262311-27262448 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 206-400
Cow position: chr29:9642384-9642592 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 210-400
Cow position: chr29:32804811-32804615 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 48

Conread position: 215-401
Cow position: chr29:10822593-10822783 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 14

Conread position: 222-401
Cow position: chr29:47043-47239 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 227-405
Cow position: chr29:7429835-7430023 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 26, 12

Conread position: 231-404
Cow position: chr29:36635009-36635193 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 301-401
Cow position: chr29:6009819-6009718 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.