Cow genome map
| Conread name: | Pla1-C0000023_J16 | 
| Conread position: | 138-392 | 
| Cow position: | chr3:50126006-50126267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 140-405 | 
| Cow position: | chr3:41209219-41209496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 23, 10 | 
| Conread position: | 145-401 | 
| Cow position: | chr3:59862753-59862491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 23, 49 | 
| Conread position: | 145-403 | 
| Cow position: | chr3:30617539-30617813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 10, 18 | 
| Conread position: | 145-405 | 
| Cow position: | chr3:23288953-23289224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 23, 49 | 
| Conread position: | 146-405 | 
| Cow position: | chr3:42448495-42448217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 16, 47 | 
| Conread position: | 149-405 | 
| Cow position: | chr3:3524390-3524130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 14, 44 | 
| Conread position: | 168-405 | 
| Cow position: | chr3:2367982-2368231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 40, 24 | 
| Conread position: | 179-403 | 
| Cow position: | chr3:7247881-7247646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 182-405 | 
| Cow position: | chr3:35964331-35964092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 193-397 | 
| Cow position: | chr3:2918802-2918581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-399 | 
| Cow position: | chr3:2870121-2869900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-399 | 
| Cow position: | chr3:7157387-7157608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-401 | 
| Cow position: | chr3:36877319-36877546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-401 | 
| Cow position: | chr3:56146636-56146426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 10, 124 | 
| Conread position: | 193-403 | 
| Cow position: | chr3:1742664-1742440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:4287422-4287195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:6783700-6783474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 15, 104 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:19799839-19800066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:19879977-19879752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 15, 111 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:20382361-20382134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:27919760-27919533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:29329957-29330183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 15, 116 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:32621709-32621933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 61, 155 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:34506011-34506237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:37970379-37970152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:40338815-40339041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:45034072-45033848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:46017385-46017152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:47080077-47080304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:51364453-51364680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:56295519-56295294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 13, 23 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:64026802-64027029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 18, 116 | 
| Conread position: | 193-405 | 
| Cow position: | chr3:68698640-68698867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 15, 125 | 
| Conread position: | 194-369 | 
| Cow position: | chr3:2854114-2854299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 194-395 | 
| Cow position: | chr3:38494573-38494358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 194-396 | 
| Cow position: | chr3:24588132-24588342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 14, 129 | 
| Conread position: | 194-396 | 
| Cow position: | chr3:63002227-63002429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 13, 44 | 
| Conread position: | 194-397 | 
| Cow position: | chr3:15054365-15054566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 14, 96 | 
| Conread position: | 194-397 | 
| Cow position: | chr3:29579961-29579742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 194-401 | 
| Cow position: | chr3:5993748-5993975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 194-401 | 
| Cow position: | chr3:18943359-18943144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 16, 27 | 
| Conread position: | 194-401 | 
| Cow position: | chr3:30315881-30315671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 17, 53 | 
| Conread position: | 194-401 | 
| Cow position: | chr3:31416352-31416130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 194-401 | 
| Cow position: | chr3:47087628-47087413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 14, 61 | 
| Conread position: | 194-401 | 
| Cow position: | chr3:48229143-48229362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 194-401 | 
| Cow position: | chr3:56100349-56100572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 194-401 | 
| Cow position: | chr3:67769155-67768942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 14, 80 | 
| Conread position: | 194-405 | 
| Cow position: | chr3:39879681-39879903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 14, 112 | 
| Conread position: | 194-405 | 
| Cow position: | chr3:48843588-48843360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 194-405 | 
| Cow position: | chr3:64651969-64651743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 194-405 | 
| Cow position: | chr3:67164612-67164396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 14, 62 | 
| Conread position: | 194-405 | 
| Cow position: | chr3:72671196-72671419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 11, 121 | 
| Conread position: | 202-401 | 
| Cow position: | chr3:2906446-2906661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 205-397 | 
| Cow position: | chr3:78026093-78026295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:595456-595247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 41, 100 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:6687110-6686921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 70, 46 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:7478597-7478809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 39, 103 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:10240973-10240773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 39, 47 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:18354689-18354894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 44, 99 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:18812818-18812611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 41, 110 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:21181373-21181584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:24444753-24444963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 41, 91 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:24644544-24644344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 45, 99 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:38867637-38867428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 41, 116 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:40824712-40824503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 41, 97 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:49136245-49136459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:49543884-49544095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:50916664-50916453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:53516924-53516714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:57483403-57483617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-401 | 
| Cow position: | chr3:72631386-72631175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-403 | 
| Cow position: | chr3:2709547-2709760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-403 | 
| Cow position: | chr3:19940215-19940000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 39, 60 | 
| Conread position: | 205-403 | 
| Cow position: | chr3:46859970-46860183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 205-404 | 
| Cow position: | chr3:48058041-48058254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-405 | 
| Cow position: | chr3:6876854-6877064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 205-405 | 
| Cow position: | chr3:30330800-30331015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 205-405 | 
| Cow position: | chr3:64016045-64016264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-405 | 
| Cow position: | chr3:66889647-66889861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 205-405 | 
| Cow position: | chr3:68872435-68872649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 39, 101 | 
| Conread position: | 206-405 | 
| Cow position: | chr3:36863139-36863352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 207-400 | 
| Cow position: | chr3:15181676-15181466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 35, 122 | 
| Conread position: | 208-383 | 
| Cow position: | chr3:58948854-58948668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 14, 117 | 
| Conread position: | 208-405 | 
| Cow position: | chr3:5884848-5884642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 48, 105 | 
| Conread position: | 209-405 | 
| Cow position: | chr3:57754116-57753906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 212-403 | 
| Cow position: | chr3:46503870-46503665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 38, 84 | 
| Conread position: | 214-401 | 
| Cow position: | chr3:3840202-3840399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 215-401 | 
| Cow position: | chr3:51938789-51938989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 216-405 | 
| Cow position: | chr3:56339108-56339310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 34, 105 | 
| Conread position: | 218-401 | 
| Cow position: | chr3:33634408-33634214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 33, 176 | 
| Conread position: | 219-401 | 
| Cow position: | chr3:42051862-42052049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 35, 28 | 
| Conread position: | 221-400 | 
| Cow position: | chr3:77424911-77424732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 56, 34 | 
| Conread position: | 225-402 | 
| Cow position: | chr3:64356503-64356689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 31, 5 | 
| Conread position: | 229-403 | 
| Cow position: | chr3:45975789-45975606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 48, 26 | 
| Conread position: | 234-401 | 
| Cow position: | chr3:19755649-19755822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 22, 67 | 
| Conread position: | 235-399 | 
| Cow position: | chr3:7170484-7170315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 253-405 | 
| Cow position: | chr3:56635858-56635704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 24, 77 | 
Show alignments to all cow chromosomes.
