Cow genome map

Conread name: Pla1-C0000023_J16

Conread position: 138-392
Cow position: chr3:50126006-50126267 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 156
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 140-405
Cow position: chr3:41209219-41209496 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 10

Conread position: 145-401
Cow position: chr3:59862753-59862491 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 23, 49

Conread position: 145-403
Cow position: chr3:30617539-30617813 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 10, 18

Conread position: 145-405
Cow position: chr3:23288953-23289224 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 49

Conread position: 146-405
Cow position: chr3:42448495-42448217 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 47

Conread position: 149-405
Cow position: chr3:3524390-3524130 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 174
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 44

Conread position: 168-405
Cow position: chr3:2367982-2368231 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 24

Conread position: 179-403
Cow position: chr3:7247881-7247646 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 182-405
Cow position: chr3:35964331-35964092 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 193-397
Cow position: chr3:2918802-2918581 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 193-399
Cow position: chr3:2870121-2869900 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 193-399
Cow position: chr3:7157387-7157608 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 193-401
Cow position: chr3:36877319-36877546 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 193-401
Cow position: chr3:56146636-56146426 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 10, 124

Conread position: 193-403
Cow position: chr3:1742664-1742440 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr3:4287422-4287195 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr3:6783700-6783474 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 104

Conread position: 193-405
Cow position: chr3:19799839-19800066 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr3:19879977-19879752 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 111

Conread position: 193-405
Cow position: chr3:20382361-20382134 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr3:27919760-27919533 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr3:29329957-29330183 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 116

Conread position: 193-405
Cow position: chr3:32621709-32621933 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 61, 155

Conread position: 193-405
Cow position: chr3:34506011-34506237 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr3:37970379-37970152 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr3:40338815-40339041 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr3:45034072-45033848 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr3:46017385-46017152 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 193-405
Cow position: chr3:47080077-47080304 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr3:51364453-51364680 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr3:56295519-56295294 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 23

Conread position: 193-405
Cow position: chr3:64026802-64027029 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 116

Conread position: 193-405
Cow position: chr3:68698640-68698867 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 125

Conread position: 194-369
Cow position: chr3:2854114-2854299 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 194-395
Cow position: chr3:38494573-38494358 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 194-396
Cow position: chr3:24588132-24588342 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 129

Conread position: 194-396
Cow position: chr3:63002227-63002429 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 44

Conread position: 194-397
Cow position: chr3:15054365-15054566 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 96

Conread position: 194-397
Cow position: chr3:29579961-29579742 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 194-401
Cow position: chr3:5993748-5993975 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 194-401
Cow position: chr3:18943359-18943144 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 16, 27

Conread position: 194-401
Cow position: chr3:30315881-30315671 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 53

Conread position: 194-401
Cow position: chr3:31416352-31416130 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 194-401
Cow position: chr3:47087628-47087413 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 14, 61

Conread position: 194-401
Cow position: chr3:48229143-48229362 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 14, 0

Conread position: 194-401
Cow position: chr3:56100349-56100572 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 194-401
Cow position: chr3:67769155-67768942 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 80

Conread position: 194-405
Cow position: chr3:39879681-39879903 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 112

Conread position: 194-405
Cow position: chr3:48843588-48843360 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 194-405
Cow position: chr3:64651969-64651743 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 194-405
Cow position: chr3:67164612-67164396 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 62

Conread position: 194-405
Cow position: chr3:72671196-72671419 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 121

Conread position: 202-401
Cow position: chr3:2906446-2906661 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 205-397
Cow position: chr3:78026093-78026295 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr3:595456-595247 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 41, 100

Conread position: 205-401
Cow position: chr3:6687110-6686921 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 70, 46

Conread position: 205-401
Cow position: chr3:7478597-7478809 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 103

Conread position: 205-401
Cow position: chr3:10240973-10240773 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 47

Conread position: 205-401
Cow position: chr3:18354689-18354894 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 99

Conread position: 205-401
Cow position: chr3:18812818-18812611 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 110

Conread position: 205-401
Cow position: chr3:21181373-21181584 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 205-401
Cow position: chr3:24444753-24444963 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 41, 91

Conread position: 205-401
Cow position: chr3:24644544-24644344 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 99

Conread position: 205-401
Cow position: chr3:38867637-38867428 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 166
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 41, 116

Conread position: 205-401
Cow position: chr3:40824712-40824503 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 97

Conread position: 205-401
Cow position: chr3:49136245-49136459 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr3:49543884-49544095 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr3:50916664-50916453 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 205-401
Cow position: chr3:53516924-53516714 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr3:57483403-57483617 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr3:72631386-72631175 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 205-403
Cow position: chr3:2709547-2709760 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 205-403
Cow position: chr3:19940215-19940000 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 60

Conread position: 205-403
Cow position: chr3:46859970-46860183 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 205-404
Cow position: chr3:48058041-48058254 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 205-405
Cow position: chr3:6876854-6877064 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 205-405
Cow position: chr3:30330800-30331015 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 205-405
Cow position: chr3:64016045-64016264 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 205-405
Cow position: chr3:66889647-66889861 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 205-405
Cow position: chr3:68872435-68872649 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 101

Conread position: 206-405
Cow position: chr3:36863139-36863352 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 207-400
Cow position: chr3:15181676-15181466 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 122

Conread position: 208-383
Cow position: chr3:58948854-58948668 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 117

Conread position: 208-405
Cow position: chr3:5884848-5884642 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 105

Conread position: 209-405
Cow position: chr3:57754116-57753906 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 212-403
Cow position: chr3:46503870-46503665 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 84

Conread position: 214-401
Cow position: chr3:3840202-3840399 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 215-401
Cow position: chr3:51938789-51938989 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 216-405
Cow position: chr3:56339108-56339310 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 105

Conread position: 218-401
Cow position: chr3:33634408-33634214 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 33, 176

Conread position: 219-401
Cow position: chr3:42051862-42052049 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 28

Conread position: 221-400
Cow position: chr3:77424911-77424732 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 34

Conread position: 225-402
Cow position: chr3:64356503-64356689 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 31, 5

Conread position: 229-403
Cow position: chr3:45975789-45975606 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 26

Conread position: 234-401
Cow position: chr3:19755649-19755822 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 67

Conread position: 235-399
Cow position: chr3:7170484-7170315 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 253-405
Cow position: chr3:56635858-56635704 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 77

Show alignments to all cow chromosomes.