Cow genome map
Conread name: | Pla1-C0000023_J16 |
Conread position: | 145-405 |
Cow position: | chr4:160341-160077 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 185 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 18, 48 |
Conread position: | 178-405 |
Cow position: | chr4:34183487-34183711 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 172 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 29, 68 |
Conread position: | 183-384 |
Cow position: | chr4:33071675-33071890 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 165 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 191-401 |
Cow position: | chr4:34178097-34178317 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 170 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 17, 85 |
Conread position: | 191-401 |
Cow position: | chr4:36897518-36897293 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 173 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 191-401 |
Cow position: | chr4:44726720-44726506 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 162 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 17, 64 |
Conread position: | 193-397 |
Cow position: | chr4:9355518-9355300 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 154 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-401 |
Cow position: | chr4:41955899-41955679 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 156 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 15, 160 |
Conread position: | 193-401 |
Cow position: | chr4:41960036-41959814 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 161 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-405 |
Cow position: | chr4:99082-99301 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 159 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 15, 113 |
Conread position: | 193-405 |
Cow position: | chr4:530541-530319 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 158 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 15, 113 |
Conread position: | 193-405 |
Cow position: | chr4:1929499-1929726 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 164 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-405 |
Cow position: | chr4:3126946-3126719 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 162 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-405 |
Cow position: | chr4:4417197-4416974 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 161 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 193-405 |
Cow position: | chr4:5443689-5443917 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 168 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 15, 117 |
Conread position: | 193-405 |
Cow position: | chr4:6567520-6567301 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 158 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 15, 164 |
Conread position: | 193-405 |
Cow position: | chr4:17092726-17092950 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 160 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 15, 117 |
Conread position: | 193-405 |
Cow position: | chr4:18337990-18337767 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 161 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-405 |
Cow position: | chr4:18423380-18423608 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 166 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 14, 116 |
Conread position: | 193-405 |
Cow position: | chr4:32213305-32213079 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 161 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 193-405 |
Cow position: | chr4:45106602-45106375 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 160 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 194-378 |
Cow position: | chr4:14139175-14138982 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 149 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 10, 28 |
Conread position: | 194-392 |
Cow position: | chr4:13958312-13958103 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 157 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 13, 116 |
Conread position: | 194-397 |
Cow position: | chr4:44924397-44924612 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 156 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 14, 87 |
Conread position: | 194-400 |
Cow position: | chr4:25598350-25598581 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 170 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 194-400 |
Cow position: | chr4:43882245-43882024 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 164 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 194-400 |
Cow position: | chr4:67682332-67682114 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 167 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 9, 113 |
Conread position: | 194-401 |
Cow position: | chr4:357044-356827 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 161 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 9, 112 |
Conread position: | 194-401 |
Cow position: | chr4:10882689-10882468 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 169 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 14, 124 |
Conread position: | 194-401 |
Cow position: | chr4:41428448-41428228 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 164 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 194-401 |
Cow position: | chr4:57985127-57984906 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 169 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 9, 211 |
Conread position: | 194-403 |
Cow position: | chr4:5925716-5925927 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 148 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 134, 57 |
Conread position: | 195-404 |
Cow position: | chr4:60263023-60263243 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 215 |
Conread position: | 202-401 |
Cow position: | chr4:19005187-19005390 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 161 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 50, 133 |
Conread position: | 202-401 |
Cow position: | chr4:68109901-68110112 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 156 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 205-394 |
Cow position: | chr4:12588455-12588257 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 154 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 41, 78 |
Conread position: | 205-396 |
Cow position: | chr4:9847085-9847290 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 156 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 45, 112 |
Conread position: | 205-396 |
Cow position: | chr4:46665661-46665450 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 161 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 205-400 |
Cow position: | chr4:13494453-13494250 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 152 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 41, 100 |
Conread position: | 205-400 |
Cow position: | chr4:28832670-28832480 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 162 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 71, 99 |
Conread position: | 205-400 |
Cow position: | chr4:43318512-43318720 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 163 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 205-401 |
Cow position: | chr4:1049134-1049341 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 159 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 40, 14 |
Conread position: | 205-401 |
Cow position: | chr4:4178375-4178175 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 147 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 32, 119 |
Conread position: | 205-401 |
Cow position: | chr4:12240097-12240299 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 159 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 72, 42 |
Conread position: | 205-401 |
Cow position: | chr4:16361032-16360834 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 154 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 95, 14 |
Conread position: | 205-401 |
Cow position: | chr4:16639733-16639531 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 154 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 72, 41 |
Conread position: | 205-401 |
Cow position: | chr4:17924838-17925047 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 162 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 205-401 |
Cow position: | chr4:26876654-26876861 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 160 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 205-401 |
Cow position: | chr4:41191475-41191684 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 158 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 205-401 |
Cow position: | chr4:42405735-42405526 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 152 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 205-401 |
Cow position: | chr4:51042162-51042375 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 152 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 205-401 |
Cow position: | chr4:69521648-69521455 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 150 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 124, 32 |
Conread position: | 205-405 |
Cow position: | chr4:5881286-5881071 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 158 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 34, 21 |
Conread position: | 205-405 |
Cow position: | chr4:44780097-44780310 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 156 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 206-405 |
Cow position: | chr4:11110155-11110365 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 168 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 207-405 |
Cow position: | chr4:39268033-39268236 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 149 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 43, 90 |
Conread position: | 208-401 |
Cow position: | chr4:6489232-6489444 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 159 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 238-405 |
Cow position: | chr4:27300402-27300569 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 128 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 40, 15 |
Conread position: | 253-401 |
Cow position: | chr4:41333756-41333604 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 81, 20 |
Conread position: | 287-401 |
Cow position: | chr4:30795365-30795479 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 49, 78 |
Show alignments to all cow chromosomes.