Cow genome map

Conread name: Pla1-C0000023_J16

Conread position: 145-405
Cow position: chr4:160341-160077 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 18, 48

Conread position: 178-405
Cow position: chr4:34183487-34183711 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 68

Conread position: 183-384
Cow position: chr4:33071675-33071890 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 191-401
Cow position: chr4:34178097-34178317 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 17, 85

Conread position: 191-401
Cow position: chr4:36897518-36897293 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 191-401
Cow position: chr4:44726720-44726506 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 17, 64

Conread position: 193-397
Cow position: chr4:9355518-9355300 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 193-401
Cow position: chr4:41955899-41955679 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 160

Conread position: 193-401
Cow position: chr4:41960036-41959814 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr4:99082-99301 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 113

Conread position: 193-405
Cow position: chr4:530541-530319 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 113

Conread position: 193-405
Cow position: chr4:1929499-1929726 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr4:3126946-3126719 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr4:4417197-4416974 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 193-405
Cow position: chr4:5443689-5443917 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 117

Conread position: 193-405
Cow position: chr4:6567520-6567301 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 164

Conread position: 193-405
Cow position: chr4:17092726-17092950 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 117

Conread position: 193-405
Cow position: chr4:18337990-18337767 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr4:18423380-18423608 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 116

Conread position: 193-405
Cow position: chr4:32213305-32213079 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr4:45106602-45106375 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 194-378
Cow position: chr4:14139175-14138982 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 28

Conread position: 194-392
Cow position: chr4:13958312-13958103 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 13, 116

Conread position: 194-397
Cow position: chr4:44924397-44924612 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 87

Conread position: 194-400
Cow position: chr4:25598350-25598581 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 194-400
Cow position: chr4:43882245-43882024 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 194-400
Cow position: chr4:67682332-67682114 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 113

Conread position: 194-401
Cow position: chr4:357044-356827 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 9, 112

Conread position: 194-401
Cow position: chr4:10882689-10882468 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 124

Conread position: 194-401
Cow position: chr4:41428448-41428228 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 194-401
Cow position: chr4:57985127-57984906 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 9, 211

Conread position: 194-403
Cow position: chr4:5925716-5925927 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 134, 57

Conread position: 195-404
Cow position: chr4:60263023-60263243 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 215

Conread position: 202-401
Cow position: chr4:19005187-19005390 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 50, 133

Conread position: 202-401
Cow position: chr4:68109901-68110112 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 205-394
Cow position: chr4:12588455-12588257 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 41, 78

Conread position: 205-396
Cow position: chr4:9847085-9847290 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 112

Conread position: 205-396
Cow position: chr4:46665661-46665450 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 205-400
Cow position: chr4:13494453-13494250 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 100

Conread position: 205-400
Cow position: chr4:28832670-28832480 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 162
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 71, 99

Conread position: 205-400
Cow position: chr4:43318512-43318720 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr4:1049134-1049341 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 14

Conread position: 205-401
Cow position: chr4:4178375-4178175 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 119

Conread position: 205-401
Cow position: chr4:12240097-12240299 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 72, 42

Conread position: 205-401
Cow position: chr4:16361032-16360834 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 95, 14

Conread position: 205-401
Cow position: chr4:16639733-16639531 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 41

Conread position: 205-401
Cow position: chr4:17924838-17925047 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 205-401
Cow position: chr4:26876654-26876861 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 205-401
Cow position: chr4:41191475-41191684 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 205-401
Cow position: chr4:42405735-42405526 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 205-401
Cow position: chr4:51042162-51042375 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 205-401
Cow position: chr4:69521648-69521455 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 32

Conread position: 205-405
Cow position: chr4:5881286-5881071 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 21

Conread position: 205-405
Cow position: chr4:44780097-44780310 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 206-405
Cow position: chr4:11110155-11110365 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 168
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 0

Conread position: 207-405
Cow position: chr4:39268033-39268236 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 90

Conread position: 208-401
Cow position: chr4:6489232-6489444 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 238-405
Cow position: chr4:27300402-27300569 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 40, 15

Conread position: 253-401
Cow position: chr4:41333756-41333604 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 20

Conread position: 287-401
Cow position: chr4:30795365-30795479 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 78

Show alignments to all cow chromosomes.