Cow genome map
| Conread name: | Pla1-C0000023_J16 | 
| Conread position: | 106-401 | 
| Cow position: | chr6:28104406-28104703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 140, 8 | 
| Conread position: | 106-401 | 
| Cow position: | chr6:43792111-43792415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 57, 8 | 
| Conread position: | 135-401 | 
| Cow position: | chr6:65843051-65842770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 11, 60 | 
| Conread position: | 145-401 | 
| Cow position: | chr6:915058-914790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 18, 47 | 
| Conread position: | 147-401 | 
| Cow position: | chr6:51087361-51087097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 16, 32 | 
| Conread position: | 176-405 | 
| Cow position: | chr6:330073-330312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 79, 25 | 
| Conread position: | 181-401 | 
| Cow position: | chr6:10339234-10339460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 26, 167 | 
| Conread position: | 181-401 | 
| Cow position: | chr6:27528614-27528841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 67, 27 | 
| Conread position: | 181-405 | 
| Cow position: | chr6:28490177-28490416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 193-377 | 
| Cow position: | chr6:28766663-28766862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-396 | 
| Cow position: | chr6:11273531-11273740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 16, 59 | 
| Conread position: | 193-397 | 
| Cow position: | chr6:41228818-41228605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 8, 115 | 
| Conread position: | 193-397 | 
| Cow position: | chr6:58066108-58065898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 15, 40 | 
| Conread position: | 193-399 | 
| Cow position: | chr6:13945289-13945068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-401 | 
| Cow position: | chr6:9264468-9264244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-404 | 
| Cow position: | chr6:12664943-12665165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 15, 112 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:2376061-2375840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 15, 165 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:2877307-2877534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:3785147-3784920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:13105440-13105213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:17596932-17597155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:26669485-26669712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:28134286-28134065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 15, 182 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:28187443-28187670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:39910715-39910487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:40276460-40276239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 15, 54 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:40379254-40379481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:45587328-45587101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:46574157-46573930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:46602866-46603093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:47047804-47048031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 193-405 | 
| Cow position: | chr6:50645804-50646031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 194-341 | 
| Cow position: | chr6:16591347-16591194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 194-391 | 
| Cow position: | chr6:18973039-18973253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 60, 8 | 
| Conread position: | 194-395 | 
| Cow position: | chr6:7177912-7178127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 194-396 | 
| Cow position: | chr6:66233182-66232970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 9, 108 | 
| Conread position: | 194-399 | 
| Cow position: | chr6:43619099-43618880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 14, 115 | 
| Conread position: | 194-401 | 
| Cow position: | chr6:3888137-3888349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 82, 48 | 
| Conread position: | 194-401 | 
| Cow position: | chr6:8759920-8760138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 194-401 | 
| Cow position: | chr6:10610237-10610030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 14, 36 | 
| Conread position: | 194-401 | 
| Cow position: | chr6:10645100-10644893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 13, 21 | 
| Conread position: | 194-401 | 
| Cow position: | chr6:17047437-17047210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 194-401 | 
| Cow position: | chr6:27471951-27471736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 15, 120 | 
| Conread position: | 194-401 | 
| Cow position: | chr6:34196754-34196534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 15, 119 | 
| Conread position: | 194-401 | 
| Cow position: | chr6:40316960-40316739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 14, 117 | 
| Conread position: | 194-401 | 
| Cow position: | chr6:48579613-48579831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 13, 137 | 
| Conread position: | 194-401 | 
| Cow position: | chr6:51715908-51715682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 9, 76 | 
| Conread position: | 194-401 | 
| Cow position: | chr6:59617489-59617267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 194-401 | 
| Cow position: | chr6:65897597-65897814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 194-403 | 
| Cow position: | chr6:52694402-52694175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 11, 150 | 
| Conread position: | 202-400 | 
| Cow position: | chr6:21974037-21973828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 44, 114 | 
| Conread position: | 202-405 | 
| Cow position: | chr6:10250238-10250453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 204-401 | 
| Cow position: | chr6:64717390-64717179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 205-394 | 
| Cow position: | chr6:15139810-15140011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 41, 140 | 
| Conread position: | 205-394 | 
| Cow position: | chr6:15278452-15278652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 41, 111 | 
| Conread position: | 205-395 | 
| Cow position: | chr6:13316102-13316309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 205-397 | 
| Cow position: | chr6:703577-703375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 41, 111 | 
| Conread position: | 205-400 | 
| Cow position: | chr6:1821259-1821455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 45, 120 | 
| Conread position: | 205-400 | 
| Cow position: | chr6:30273530-30273737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 41, 114 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:3276004-3276215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:3487061-3487271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:5948416-5948626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:20559737-20559946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 38, 20 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:21835820-21836017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 130, 41 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:25792393-25792602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 41, 20 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:34890759-34890966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 41, 105 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:35875341-35875555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:39333510-39333712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 68, 99 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:40553218-40553417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 64, 47 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:40865957-40866167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:41190662-41190468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 40, 157 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:47041845-47042060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 41, 121 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:51731448-51731237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:58028036-58027831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 59, 41 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:58601845-58601639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:60932052-60931843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 47, 103 | 
| Conread position: | 205-401 | 
| Cow position: | chr6:66546850-66546644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 50, 25 | 
| Conread position: | 205-402 | 
| Cow position: | chr6:1535209-1535420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 205-403 | 
| Cow position: | chr6:29312870-29312655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 205-403 | 
| Cow position: | chr6:65915669-65915467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 38, 99 | 
| Conread position: | 205-405 | 
| Cow position: | chr6:50240-50453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 41, 104 | 
| Conread position: | 205-405 | 
| Cow position: | chr6:16053473-16053260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 205-405 | 
| Cow position: | chr6:27170944-27170732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 205-405 | 
| Cow position: | chr6:44262110-44262317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 72, 37 | 
| Conread position: | 205-405 | 
| Cow position: | chr6:65820606-65820820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 217-401 | 
| Cow position: | chr6:1381977-1382163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 27, 19 | 
| Conread position: | 221-403 | 
| Cow position: | chr6:40973-41172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 221-405 | 
| Cow position: | chr6:184435-184625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 56, 18 | 
| Conread position: | 227-401 | 
| Cow position: | chr6:36527641-36527458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 37, 47 | 
| Conread position: | 237-405 | 
| Cow position: | chr6:28276337-28276162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 11, 69 | 
| Conread position: | 243-405 | 
| Cow position: | chr6:13310032-13310204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 13, 0 | 
Show alignments to all cow chromosomes.
