Cow genome map

Conread name: Pla1-C0000023_J16

Conread position: 106-401
Cow position: chr6:28104406-28104703 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 140, 8

Conread position: 106-401
Cow position: chr6:43792111-43792415 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 8

Conread position: 135-401
Cow position: chr6:65843051-65842770 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 11, 60

Conread position: 145-401
Cow position: chr6:915058-914790 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 18, 47

Conread position: 147-401
Cow position: chr6:51087361-51087097 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 16, 32

Conread position: 176-405
Cow position: chr6:330073-330312 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 79, 25

Conread position: 181-401
Cow position: chr6:10339234-10339460 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 167

Conread position: 181-401
Cow position: chr6:27528614-27528841 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 67, 27

Conread position: 181-405
Cow position: chr6:28490177-28490416 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 193-377
Cow position: chr6:28766663-28766862 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 193-396
Cow position: chr6:11273531-11273740 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 59

Conread position: 193-397
Cow position: chr6:41228818-41228605 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 8, 115

Conread position: 193-397
Cow position: chr6:58066108-58065898 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 40

Conread position: 193-399
Cow position: chr6:13945289-13945068 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 193-401
Cow position: chr6:9264468-9264244 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 193-404
Cow position: chr6:12664943-12665165 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 112

Conread position: 193-405
Cow position: chr6:2376061-2375840 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 165

Conread position: 193-405
Cow position: chr6:2877307-2877534 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr6:3785147-3784920 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr6:13105440-13105213 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr6:17596932-17597155 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr6:26669485-26669712 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr6:28134286-28134065 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 15, 182

Conread position: 193-405
Cow position: chr6:28187443-28187670 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr6:39910715-39910487 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 193-405
Cow position: chr6:40276460-40276239 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 54

Conread position: 193-405
Cow position: chr6:40379254-40379481 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr6:45587328-45587101 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr6:46574157-46573930 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr6:46602866-46603093 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr6:47047804-47048031 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr6:50645804-50646031 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 194-341
Cow position: chr6:16591347-16591194 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 194-391
Cow position: chr6:18973039-18973253 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 8

Conread position: 194-395
Cow position: chr6:7177912-7178127 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 194-396
Cow position: chr6:66233182-66232970 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 108

Conread position: 194-399
Cow position: chr6:43619099-43618880 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 115

Conread position: 194-401
Cow position: chr6:3888137-3888349 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 82, 48

Conread position: 194-401
Cow position: chr6:8759920-8760138 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 194-401
Cow position: chr6:10610237-10610030 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 36

Conread position: 194-401
Cow position: chr6:10645100-10644893 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 21

Conread position: 194-401
Cow position: chr6:17047437-17047210 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 194-401
Cow position: chr6:27471951-27471736 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 120

Conread position: 194-401
Cow position: chr6:34196754-34196534 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 15, 119

Conread position: 194-401
Cow position: chr6:40316960-40316739 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 117

Conread position: 194-401
Cow position: chr6:48579613-48579831 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 137

Conread position: 194-401
Cow position: chr6:51715908-51715682 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 76

Conread position: 194-401
Cow position: chr6:59617489-59617267 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 194-401
Cow position: chr6:65897597-65897814 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 194-403
Cow position: chr6:52694402-52694175 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 150

Conread position: 202-400
Cow position: chr6:21974037-21973828 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 44, 114

Conread position: 202-405
Cow position: chr6:10250238-10250453 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 204-401
Cow position: chr6:64717390-64717179 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 205-394
Cow position: chr6:15139810-15140011 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 140

Conread position: 205-394
Cow position: chr6:15278452-15278652 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 41, 111

Conread position: 205-395
Cow position: chr6:13316102-13316309 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 205-397
Cow position: chr6:703577-703375 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 111

Conread position: 205-400
Cow position: chr6:1821259-1821455 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 120

Conread position: 205-400
Cow position: chr6:30273530-30273737 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 41, 114

Conread position: 205-401
Cow position: chr6:3276004-3276215 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr6:3487061-3487271 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr6:5948416-5948626 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 168
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 205-401
Cow position: chr6:20559737-20559946 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 20

Conread position: 205-401
Cow position: chr6:21835820-21836017 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 130, 41

Conread position: 205-401
Cow position: chr6:25792393-25792602 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 20

Conread position: 205-401
Cow position: chr6:34890759-34890966 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 105

Conread position: 205-401
Cow position: chr6:35875341-35875555 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr6:39333510-39333712 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 68, 99

Conread position: 205-401
Cow position: chr6:40553218-40553417 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 47

Conread position: 205-401
Cow position: chr6:40865957-40866167 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr6:41190662-41190468 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 157

Conread position: 205-401
Cow position: chr6:47041845-47042060 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 121

Conread position: 205-401
Cow position: chr6:51731448-51731237 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr6:58028036-58027831 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 41

Conread position: 205-401
Cow position: chr6:58601845-58601639 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 205-401
Cow position: chr6:60932052-60931843 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 103

Conread position: 205-401
Cow position: chr6:66546850-66546644 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 25

Conread position: 205-402
Cow position: chr6:1535209-1535420 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 205-403
Cow position: chr6:29312870-29312655 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 205-403
Cow position: chr6:65915669-65915467 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 99

Conread position: 205-405
Cow position: chr6:50240-50453 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 41, 104

Conread position: 205-405
Cow position: chr6:16053473-16053260 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 205-405
Cow position: chr6:27170944-27170732 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 205-405
Cow position: chr6:44262110-44262317 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 72, 37

Conread position: 205-405
Cow position: chr6:65820606-65820820 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 217-401
Cow position: chr6:1381977-1382163 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 19

Conread position: 221-403
Cow position: chr6:40973-41172 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 221-405
Cow position: chr6:184435-184625 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 18

Conread position: 227-401
Cow position: chr6:36527641-36527458 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 47

Conread position: 237-405
Cow position: chr6:28276337-28276162 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 69

Conread position: 243-405
Cow position: chr6:13310032-13310204 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.