Cow genome map

Conread name: Pla1-C0000023_J16

Conread position: 106-401
Cow position: chr7:61579049-61578754 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 8

Conread position: 106-401
Cow position: chr7:66906275-66905970 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 8

Conread position: 136-401
Cow position: chr7:1453174-1452891 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 27

Conread position: 145-401
Cow position: chr7:55536412-55536678 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 49

Conread position: 145-403
Cow position: chr7:25441019-25440746 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 50

Conread position: 145-405
Cow position: chr7:6647159-6647421 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 17

Conread position: 145-405
Cow position: chr7:7260036-7259771 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 59

Conread position: 145-405
Cow position: chr7:55040971-55041246 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 48, 26

Conread position: 145-405
Cow position: chr7:65812337-65812065 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 12, 18

Conread position: 155-401
Cow position: chr7:14213855-14214120 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 23

Conread position: 162-351
Cow position: chr7:39793363-39793168 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 29

Conread position: 180-405
Cow position: chr7:34546849-34546605 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 181-393
Cow position: chr7:21126181-21126406 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 163

Conread position: 193-400
Cow position: chr7:40320648-40320441 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 15, 113

Conread position: 193-401
Cow position: chr7:5261449-5261670 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 131

Conread position: 193-401
Cow position: chr7:20773866-20774086 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 193-403
Cow position: chr7:67676545-67676336 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 68, 19

Conread position: 193-404
Cow position: chr7:20060954-20060728 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr7:6629832-6630057 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 15, 34

Conread position: 193-405
Cow position: chr7:11448037-11447809 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 193-405
Cow position: chr7:20797979-20798198 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 15, 106

Conread position: 193-405
Cow position: chr7:27100822-27101046 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr7:52763753-52763525 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 193-405
Cow position: chr7:62445685-62445903 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 79

Conread position: 193-405
Cow position: chr7:66036639-66036412 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 194-378
Cow position: chr7:1403022-1403205 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 60

Conread position: 194-378
Cow position: chr7:66573534-66573710 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 49

Conread position: 194-388
Cow position: chr7:39097079-39097280 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 133

Conread position: 194-388
Cow position: chr7:59680315-59680111 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 14, 98

Conread position: 194-395
Cow position: chr7:51015725-51015514 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 103

Conread position: 194-400
Cow position: chr7:29471940-29471718 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 13, 142

Conread position: 194-401
Cow position: chr7:444793-445017 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 9, 126

Conread position: 194-401
Cow position: chr7:546313-546092 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 194-401
Cow position: chr7:1371179-1371396 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 14, 53

Conread position: 194-401
Cow position: chr7:21311917-21311696 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 15, 131

Conread position: 194-401
Cow position: chr7:40268511-40268725 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 81

Conread position: 194-401
Cow position: chr7:42871612-42871391 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 181
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 13, 116

Conread position: 194-401
Cow position: chr7:45947683-45947891 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 73, 42

Conread position: 194-401
Cow position: chr7:49828867-49829080 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 13, 132

Conread position: 194-401
Cow position: chr7:57563636-57563850 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 8

Conread position: 194-403
Cow position: chr7:33333027-33332806 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 14, 60

Conread position: 194-405
Cow position: chr7:996212-996000 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 131

Conread position: 194-405
Cow position: chr7:20533414-20533193 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 194-405
Cow position: chr7:29368572-29368781 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 83, 31

Conread position: 195-401
Cow position: chr7:58995039-58994833 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 62

Conread position: 196-405
Cow position: chr7:19990482-19990261 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 195

Conread position: 202-397
Cow position: chr7:39554039-39554238 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 110

Conread position: 202-401
Cow position: chr7:526426-526219 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 165

Conread position: 202-401
Cow position: chr7:541515-541716 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 19

Conread position: 202-401
Cow position: chr7:24878425-24878633 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 106

Conread position: 202-403
Cow position: chr7:67495560-67495349 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 19

Conread position: 205-333
Cow position: chr7:34417024-34417161 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 205-369
Cow position: chr7:24934099-24934274 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 104

Conread position: 205-391
Cow position: chr7:27788407-27788206 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 108

Conread position: 205-391
Cow position: chr7:41874822-41875013 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 54

Conread position: 205-393
Cow position: chr7:18445299-18445491 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 91

Conread position: 205-401
Cow position: chr7:1609182-1609394 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 205-401
Cow position: chr7:3156926-3156716 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 205-401
Cow position: chr7:5308658-5308866 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr7:5664022-5663812 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr7:8143522-8143738 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr7:10429973-10430175 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 41

Conread position: 205-401
Cow position: chr7:13532459-13532658 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 130, 41

Conread position: 205-401
Cow position: chr7:14138140-14138347 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 205-401
Cow position: chr7:21233550-21233760 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr7:21986858-21986665 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 130, 41

Conread position: 205-401
Cow position: chr7:24807028-24807225 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 102

Conread position: 205-401
Cow position: chr7:34487367-34487162 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 105

Conread position: 205-401
Cow position: chr7:38398273-38398064 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr7:48635875-48635683 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 127

Conread position: 205-401
Cow position: chr7:64239538-64239756 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 205-401
Cow position: chr7:67430023-67429822 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 50, 112

Conread position: 205-401
Cow position: chr7:67490147-67489946 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 117

Conread position: 205-402
Cow position: chr7:57211607-57211397 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 46, 14

Conread position: 205-405
Cow position: chr7:48804983-48805197 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 212-397
Cow position: chr7:24058886-24058700 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 35

Conread position: 215-405
Cow position: chr7:64350937-64350729 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 216-394
Cow position: chr7:27605875-27606056 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 41

Conread position: 221-401
Cow position: chr7:46900629-46900823 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 227-401
Cow position: chr7:3124900-3124714 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Show alignments to all cow chromosomes.