Cow genome map
| Conread name: | Pla1-C0000023_J16 |
| Conread position: | 114-401 |
| Cow position: | chrX:14596134-14595836 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 114-405 |
| Cow position: | chrX:30365513-30365795 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 39 |
| Conread position: | 136-401 |
| Cow position: | chrX:30138306-30138585 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 10, 58 |
| Conread position: | 136-405 |
| Cow position: | chrX:35531126-35530841 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 60 |
| Conread position: | 145-401 |
| Cow position: | chrX:5356564-5356831 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 145-405 |
| Cow position: | chrX:673944-674214 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 145-405 |
| Cow position: | chrX:24771601-24771875 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 147-405 |
| Cow position: | chrX:27618874-27619145 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 16, 55 |
| Conread position: | 170-394 |
| Cow position: | chrX:12481230-12480994 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 176-400 |
| Cow position: | chrX:3419984-3420219 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 16 |
| Conread position: | 176-401 |
| Cow position: | chrX:29852343-29852576 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 70 |
| Conread position: | 181-372 |
| Cow position: | chrX:4797514-4797317 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 24, 94 |
| Conread position: | 181-401 |
| Cow position: | chrX:21830750-21830522 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 181-405 |
| Cow position: | chrX:3083911-3084149 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 181-405 |
| Cow position: | chrX:37015354-37015111 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 189-401 |
| Cow position: | chrX:13411924-13412141 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 21 |
| Conread position: | 193-394 |
| Cow position: | chrX:22128528-22128725 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 55 |
| Conread position: | 193-397 |
| Cow position: | chrX:15486566-15486775 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 15, 83 |
| Conread position: | 193-398 |
| Cow position: | chrX:16684622-16684842 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-399 |
| Cow position: | chrX:3467431-3467652 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-399 |
| Cow position: | chrX:16276863-16276641 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 193-399 |
| Cow position: | chrX:29172547-29172768 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-399 |
| Cow position: | chrX:29935812-29935591 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-401 |
| Cow position: | chrX:15126013-15126234 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 15, 124 |
| Conread position: | 193-401 |
| Cow position: | chrX:27316491-27316268 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-401 |
| Cow position: | chrX:28521387-28521603 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 114 |
| Conread position: | 193-403 |
| Cow position: | chrX:27084181-27083956 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:2577638-2577414 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 10, 113 |
| Conread position: | 193-405 |
| Cow position: | chrX:2815270-2815493 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 153 |
| Conread position: | 193-405 |
| Cow position: | chrX:2858164-2858387 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 153 |
| Conread position: | 193-405 |
| Cow position: | chrX:3374696-3374920 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 46, 129 |
| Conread position: | 193-405 |
| Cow position: | chrX:5335267-5335497 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:5864609-5864382 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:6871860-6872082 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 193-405 |
| Cow position: | chrX:7482847-7482620 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:8589376-8589150 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:11423084-11422859 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:12287188-12287415 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:12702490-12702715 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:15979744-15979970 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:16463103-16463330 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:17052758-17052531 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:18452194-18451967 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:20035187-20035414 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:26398913-26399140 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:27425109-27425337 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-405 |
| Cow position: | chrX:30201524-30201743 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 63 |
| Conread position: | 194-372 |
| Cow position: | chrX:39694860-39694672 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 163 |
| Conread position: | 194-396 |
| Cow position: | chrX:20695613-20695824 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 15, 175 |
| Conread position: | 194-397 |
| Cow position: | chrX:21643690-21643909 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 194-397 |
| Cow position: | chrX:23389307-23389522 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 52, 116 |
| Conread position: | 194-400 |
| Cow position: | chrX:30058264-30058044 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 194-401 |
| Cow position: | chrX:12184155-12183929 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 7 |
| Conread position: | 194-401 |
| Cow position: | chrX:17666581-17666792 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 14, 105 |
| Conread position: | 194-401 |
| Cow position: | chrX:29097411-29097188 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 194-401 |
| Cow position: | chrX:36136353-36136566 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 194-401 |
| Cow position: | chrX:46235958-46235735 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 14, 181 |
| Conread position: | 194-402 |
| Cow position: | chrX:21059977-21059770 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 58 |
| Conread position: | 194-402 |
| Cow position: | chrX:24134055-24134268 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 194-403 |
| Cow position: | chrX:20798523-20798310 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 194-405 |
| Cow position: | chrX:6013749-6013962 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 194-405 |
| Cow position: | chrX:30068637-30068858 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 171 |
| Conread position: | 194-405 |
| Cow position: | chrX:41850000-41850213 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 76 |
| Conread position: | 195-401 |
| Cow position: | chrX:2534859-2535077 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 13, 131 |
| Conread position: | 195-404 |
| Cow position: | chrX:28560684-28560901 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 153 |
| Conread position: | 195-405 |
| Cow position: | chrX:29886203-29885977 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 202-401 |
| Cow position: | chrX:971975-971772 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 54, 98 |
| Conread position: | 202-401 |
| Cow position: | chrX:35026249-35026038 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 107 |
| Conread position: | 202-405 |
| Cow position: | chrX:32065965-32066179 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 205-395 |
| Cow position: | chrX:21491364-21491152 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 205-395 |
| Cow position: | chrX:29792831-29793033 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 109 |
| Conread position: | 205-399 |
| Cow position: | chrX:7031665-7031457 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 205-399 |
| Cow position: | chrX:13075495-13075702 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 205-399 |
| Cow position: | chrX:13096058-13096265 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 205-399 |
| Cow position: | chrX:13447625-13447833 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 205-399 |
| Cow position: | chrX:15178234-15178442 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 205-399 |
| Cow position: | chrX:15623300-15623506 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 205-399 |
| Cow position: | chrX:28586181-28585974 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 205-400 |
| Cow position: | chrX:27962054-27961848 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 50, 102 |
| Conread position: | 205-400 |
| Cow position: | chrX:31199757-31199556 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 104 |
| Conread position: | 205-401 |
| Cow position: | chrX:2481430-2481639 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 184 |
| Conread position: | 205-401 |
| Cow position: | chrX:4752426-4752634 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 205-401 |
| Cow position: | chrX:8610503-8610709 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 105 |
| Conread position: | 205-401 |
| Cow position: | chrX:9093778-9093566 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-401 |
| Cow position: | chrX:12314558-12314759 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 162 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 205-401 |
| Cow position: | chrX:13054214-13054017 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 45, 142 |
| Conread position: | 205-401 |
| Cow position: | chrX:15600348-15600152 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 72, 94 |
| Conread position: | 205-401 |
| Cow position: | chrX:16780488-16780274 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 205-401 |
| Cow position: | chrX:18952477-18952688 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-401 |
| Cow position: | chrX:21590188-21589985 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 205-401 |
| Cow position: | chrX:22817038-22816840 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 139 |
| Conread position: | 205-401 |
| Cow position: | chrX:23039926-23040131 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 104 |
| Conread position: | 205-401 |
| Cow position: | chrX:23278221-23278016 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 112 |
| Conread position: | 205-401 |
| Cow position: | chrX:23454819-23455025 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 205-401 |
| Cow position: | chrX:26529168-26528967 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 70 |
| Conread position: | 205-401 |
| Cow position: | chrX:26757428-26757622 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 205-401 |
| Cow position: | chrX:28650349-28650561 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 205-401 |
| Cow position: | chrX:29949397-29949606 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 205-401 |
| Cow position: | chrX:30170644-30170843 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 104, 94 |
| Conread position: | 205-401 |
| Cow position: | chrX:30182728-30182947 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-401 |
| Cow position: | chrX:30230899-30231105 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 205-401 |
| Cow position: | chrX:35386009-35386203 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 123, 42 |
| Conread position: | 205-401 |
| Cow position: | chrX:38148798-38148588 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 47, 113 |
| Conread position: | 205-401 |
| Cow position: | chrX:39562749-39562941 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 86, 48 |
| Conread position: | 205-401 |
| Cow position: | chrX:44388960-44388754 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 205-403 |
| Cow position: | chrX:1548180-1547968 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 41, 112 |
| Conread position: | 205-403 |
| Cow position: | chrX:1835015-1834807 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 43, 164 |
| Conread position: | 205-403 |
| Cow position: | chrX:34219502-34219301 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 45, 113 |
| Conread position: | 205-405 |
| Cow position: | chrX:983866-983652 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 205-405 |
| Cow position: | chrX:5322527-5322739 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 205-405 |
| Cow position: | chrX:7753108-7752888 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 205-405 |
| Cow position: | chrX:11148134-11148348 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 205-405 |
| Cow position: | chrX:12354437-12354223 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 205-405 |
| Cow position: | chrX:13397017-13397231 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 205-405 |
| Cow position: | chrX:16811245-16811457 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 39, 126 |
| Conread position: | 205-405 |
| Cow position: | chrX:17477222-17477436 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 205-405 |
| Cow position: | chrX:18220628-18220411 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 205-405 |
| Cow position: | chrX:18658608-18658806 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 36 |
| Conread position: | 205-405 |
| Cow position: | chrX:27592786-27592998 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 41, 112 |
| Conread position: | 205-405 |
| Cow position: | chrX:27986628-27986835 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 41, 121 |
| Conread position: | 205-405 |
| Cow position: | chrX:29910228-29910441 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 205-405 |
| Cow position: | chrX:30012199-30011987 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-405 |
| Cow position: | chrX:37813352-37813140 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 117 |
| Conread position: | 206-397 |
| Cow position: | chrX:26766000-26766204 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 104 |
| Conread position: | 215-401 |
| Cow position: | chrX:29286621-29286426 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 103 |
| Conread position: | 216-405 |
| Cow position: | chrX:8480834-8480639 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 220-403 |
| Cow position: | chrX:321633-321455 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 221-401 |
| Cow position: | chrX:26999754-26999571 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 233-401 |
| Cow position: | chrX:28868082-28868253 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 41 |
| Conread position: | 235-405 |
| Cow position: | chrX:12653361-12653536 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 253-401 |
| Cow position: | chrX:22618160-22618317 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 275-401 |
| Cow position: | chrX:23133088-23132960 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 33 |
Show alignments to all cow chromosomes.