Cow genome map
| Conread name: | Pla1-C0000028_H02 |
| Conread position: | 1-173 |
| Cow position: | chr10:279375-279203 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 1-191 |
| Cow position: | chr10:10797853-10797670 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 175, 88 |
| Conread position: | 1-215 |
| Cow position: | chr10:11355748-11355537 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 72, 14 |
| Conread position: | 1-260 |
| Cow position: | chr10:1665299-1665039 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 249, 0 |
| Conread position: | 1-332 |
| Cow position: | chr10:28148967-28148658 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-333 |
| Cow position: | chr10:51782178-51781854 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 206, 28 |
| Conread position: | 1-335 |
| Cow position: | chr10:28793902-28793581 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 33, 57 |
| Conread position: | 1-337 |
| Cow position: | chr10:126520-126846 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 1-344 |
| Cow position: | chr10:11684399-11684059 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 230, 189 |
| Conread position: | 1-356 |
| Cow position: | chr10:23439898-23439552 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 74, 81 |
| Conread position: | 1-378 |
| Cow position: | chr10:34683513-34683882 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 31, 205 |
| Conread position: | 1-403 |
| Cow position: | chr10:29631566-29631177 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 190, 201 |
| Conread position: | 1-424 |
| Cow position: | chr10:36469218-36468821 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 280 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 345, 49 |
| Conread position: | 1-452 |
| Cow position: | chr10:58812519-58812087 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 295 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 100, 49 |
| Conread position: | 1-467 |
| Cow position: | chr10:16820047-16819561 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 311 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 1-486 |
| Cow position: | chr10:39181028-39181508 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 307 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 371, 245 |
| Conread position: | 1-491 |
| Cow position: | chr10:14334613-14334129 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 323 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 104, 255 |
| Conread position: | 1-491 |
| Cow position: | chr10:30684260-30683774 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 247 |
| Conread position: | 1-491 |
| Cow position: | chr10:57988762-57988279 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 314 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 359, 239 |
| Conread position: | 1-493 |
| Cow position: | chr10:17433589-17434083 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 315 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 88, 201 |
| Conread position: | 1-493 |
| Cow position: | chr10:24784872-24784403 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 164, 56 |
| Conread position: | 1-493 |
| Cow position: | chr10:32558580-32559065 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 237, 112 |
| Conread position: | 1-494 |
| Cow position: | chr10:14805078-14805566 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-494 |
| Cow position: | chr10:19840915-19841399 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 325 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 1-496 |
| Cow position: | chr10:21488198-21488678 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 156, 69 |
| Conread position: | 1-497 |
| Cow position: | chr10:1378738-1379219 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 397, 25 |
| Conread position: | 1-497 |
| Cow position: | chr10:7897250-7896758 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-497 |
| Cow position: | chr10:10583349-10583844 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 316 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 1-497 |
| Cow position: | chr10:22102469-22102956 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 246 |
| Conread position: | 1-497 |
| Cow position: | chr10:37771118-37771607 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 326 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 116, 203 |
| Conread position: | 1-497 |
| Cow position: | chr10:39815166-39814676 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-497 |
| Cow position: | chr10:39878198-39877701 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 331 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 63, 248 |
| Conread position: | 1-497 |
| Cow position: | chr10:41568333-41568824 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 192 |
| Conread position: | 1-497 |
| Cow position: | chr10:55094503-55094987 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 324 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 182, 26 |
| Conread position: | 2-260 |
| Cow position: | chr10:50132841-50132592 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 249, 105 |
| Conread position: | 2-349 |
| Cow position: | chr10:21399445-21399109 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 203, 63 |
| Conread position: | 2-372 |
| Cow position: | chr10:9945051-9944703 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 2-461 |
| Cow position: | chr10:53321161-53320717 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 2-491 |
| Cow position: | chr10:11821975-11822465 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 326 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 63, 253 |
| Conread position: | 2-493 |
| Cow position: | chr10:29011419-29010950 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 319 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 352, 110 |
| Conread position: | 2-494 |
| Cow position: | chr10:28256183-28255688 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 162 |
| Conread position: | 2-497 |
| Cow position: | chr10:44708378-44707893 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 322 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 191, 203 |
| Conread position: | 3-332 |
| Cow position: | chr10:20375598-20375285 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 110 |
| Conread position: | 3-492 |
| Cow position: | chr10:18342918-18342453 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 3-493 |
| Cow position: | chr10:17197144-17196680 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 82 |
| Conread position: | 3-497 |
| Cow position: | chr10:37307822-37308296 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 97 |
| Conread position: | 3-497 |
| Cow position: | chr10:41878157-41878647 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 202 |
| Conread position: | 5-498 |
| Cow position: | chr10:7478067-7477604 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 319 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 454, 42 |
| Conread position: | 6-198 |
| Cow position: | chr10:2725907-2726098 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 7-494 |
| Cow position: | chr10:62585429-62585897 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 314 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 145, 52 |
| Conread position: | 10-249 |
| Cow position: | chr10:58096784-58096551 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 181, 47 |
| Conread position: | 10-468 |
| Cow position: | chr10:10564321-10564758 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 79 |
| Conread position: | 12-394 |
| Cow position: | chr10:40398242-40398607 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 12-498 |
| Cow position: | chr10:20118373-20117911 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 330 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 21, 9 |
| Conread position: | 14-494 |
| Cow position: | chr10:44102385-44102855 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 321 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 48, 165 |
| Conread position: | 16-373 |
| Cow position: | chr10:24102289-24101950 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 103, 78 |
| Conread position: | 26-497 |
| Cow position: | chr10:55024849-55025300 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 305 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 7, 134 |
| Conread position: | 57-339 |
| Cow position: | chr10:14862958-14863219 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 57-494 |
| Cow position: | chr10:40462370-40462793 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 290 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 37, 193 |
| Conread position: | 59-499 |
| Cow position: | chr10:51211227-51211650 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 300 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 86-494 |
| Cow position: | chr10:53485910-53485517 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 258, 162 |
| Conread position: | 104-494 |
| Cow position: | chr10:53826977-53827357 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 55 |
| Conread position: | 105-497 |
| Cow position: | chr10:10172070-10172458 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 88, 142 |
| Conread position: | 106-446 |
| Cow position: | chr10:33572345-33572674 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 112-497 |
| Cow position: | chr10:8291390-8291767 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 113-494 |
| Cow position: | chr10:56967522-56967885 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 82, 54 |
| Conread position: | 116-491 |
| Cow position: | chr10:32317130-32317492 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 282, 120 |
| Conread position: | 140-394 |
| Cow position: | chr10:50614910-50615147 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 198, 17 |
| Conread position: | 169-497 |
| Cow position: | chr10:39439552-39439875 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 191, 79 |
| Conread position: | 281-499 |
| Cow position: | chr10:10242437-10242657 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 292-498 |
| Cow position: | chr10:68486684-68486890 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 80, 24 |
Show alignments to all cow chromosomes.