Cow genome map


           Conread name:
           Pla1-C0000028_H02
        

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               117, 102
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               196, 62
               

               Conread position:
               1-301
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               44, 50
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               1-332
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               84, 79
               

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               121, 102
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 111
               

               Conread position:
               1-389
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               209, 110
               

               Conread position:
               1-392
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               256
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               269
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               212, 46
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               265
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               223, 58
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 63
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               299
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               360, 74
               

               Conread position:
               1-446
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               292
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               261, 127
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               190, 39
               

               Conread position:
               1-457
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               289
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               1-461
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               307
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               218, 56
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 124
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               319
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               45, 101
               

               Conread position:
               1-487
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               156, 202
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               141, 71
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               314
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               122, 38
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               319
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               156, 127
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               319
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               343, 106
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               330
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               310
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 80
               

               Conread position:
               1-493
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               322
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               1-496
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 56
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               350, 245
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               335
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 71
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               359, 247
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 204
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               327
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               194, 204
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               317
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               413, 109
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               323
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               326
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               192, 170
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               328
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               102, 219
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               411, 245
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               230, 189
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 204
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 204
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               397, 98
               

               Conread position:
               1-499
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               341
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               392, 119
               

               Conread position:
               1-499
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               337
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               77, 17
               

               Conread position:
               1-499
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 56
               

               Conread position:
               2-260
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               189, 60
               

               Conread position:
               2-324
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               91, 204
               

               Conread position:
               2-394
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               143, 260
               

               Conread position:
               2-442
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               72, 68
               

               Conread position:
               2-476
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 51
               

               Conread position:
               2-497
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               2-499
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               3-491
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               318
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               154, 107
               

               Conread position:
               3-497
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               318
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               3-497
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 72
               

               Conread position:
               4-271
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               4-352
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 22
               

               Conread position:
               5-424
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               276
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               7-497
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 198
               

               Conread position:
               9-394
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               52, 7
               

               Conread position:
               10-448
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               301
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               165, 47
               

               Conread position:
               11-393
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 123
               

               Conread position:
               11-397
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               261
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               281, 183
               

               Conread position:
               18-394
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 39
               

               Conread position:
               18-499
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               327
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               22-491
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               306
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               57, 74
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               277, 22
               

               Conread position:
               27-242
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               28-497
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               303
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               332, 100
               

               Conread position:
               31-450
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               71, 127
               

               Conread position:
               44-288
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               17, 13
               

               Conread position:
               57-394
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               134, 145
               

               Conread position:
               58-394
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               314, 37
               

               Conread position:
               59-394
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               53, 21
               

               Conread position:
               59-493
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               293
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               292, 48
               

               Conread position:
               80-252
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               92-494
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               99, 110
               

               Conread position:
               105-499
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               337, 48
               

               Conread position:
               111-499
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               258
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               116-358
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               45, 136
               

               Conread position:
               145-497
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 103
               

               Conread position:
               145-499
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               35, 12
               

               Conread position:
               146-494
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               213-499
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               186, 31
               

               Conread position:
               254-499
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               136, 162
               
Show alignments to all cow chromosomes.