Cow genome map
| Conread name: | Pla1-C0000028_H02 |
| Conread position: | 1-259 |
| Cow position: | chr12:27513496-27513754 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 158, 45 |
| Conread position: | 1-285 |
| Cow position: | chr12:20604299-20604588 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 205, 179 |
| Conread position: | 1-390 |
| Cow position: | chr12:25099913-25099527 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 109 |
| Conread position: | 1-397 |
| Cow position: | chr12:46684210-46683839 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 171, 28 |
| Conread position: | 1-446 |
| Cow position: | chr12:11099382-11099824 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 303 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 1-493 |
| Cow position: | chr12:1403652-1404141 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 322 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 1-497 |
| Cow position: | chr12:3362099-3362584 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 322 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 71, 248 |
| Conread position: | 1-497 |
| Cow position: | chr12:7863713-7863223 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 45 |
| Conread position: | 1-497 |
| Cow position: | chr12:35345709-35346180 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 319 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 1-497 |
| Cow position: | chr12:37560168-37560663 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 325 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 14, 207 |
| Conread position: | 1-497 |
| Cow position: | chr12:42607106-42606601 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 322 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 245, 201 |
| Conread position: | 1-497 |
| Cow position: | chr12:42858377-42857884 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 171 |
| Conread position: | 2-497 |
| Cow position: | chr12:48471718-48471237 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 316 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 189, 68 |
| Conread position: | 3-451 |
| Cow position: | chr12:11510680-11511087 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 399, 45 |
| Conread position: | 4-497 |
| Cow position: | chr12:27931741-27931259 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 319 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 327, 106 |
| Conread position: | 21-368 |
| Cow position: | chr12:24929297-24928974 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 164, 16 |
| Conread position: | 23-476 |
| Cow position: | chr12:8554057-8554477 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 319 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 28-250 |
| Cow position: | chr12:6618310-6618519 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 44-394 |
| Cow position: | chr12:33704528-33704846 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 9 |
| Conread position: | 59-410 |
| Cow position: | chr12:20430536-20430879 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 145, 100 |
| Conread position: | 63-252 |
| Cow position: | chr12:6861270-6861448 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 63-497 |
| Cow position: | chr12:22204493-22204062 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 187 |
| Conread position: | 110-405 |
| Cow position: | chr12:5482302-5482026 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 114-337 |
| Cow position: | chr12:21290439-21290656 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 129-324 |
| Cow position: | chr12:32973885-32974079 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 68, 104 |
| Conread position: | 174-395 |
| Cow position: | chr12:32913182-32912972 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 7, 20 |
| Conread position: | 259-499 |
| Cow position: | chr12:27081876-27081644 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 141, 23 |
Show alignments to all cow chromosomes.