Cow genome map


           Conread name:
           Pla1-C0000028_H02
        

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               97, 63
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1-341
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               190, 51
               

               Conread position:
               1-349
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 102
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 42
               

               Conread position:
               1-376
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               36, 25
               

               Conread position:
               1-387
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-393
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               122, 177
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               194, 25
               

               Conread position:
               1-404
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               182, 204
               

               Conread position:
               1-445
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               293
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               32, 110
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               309
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               371, 75
               

               Conread position:
               1-461
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               302
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               290, 121
               

               Conread position:
               1-461
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               121, 55
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               321
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               73, 177
               

               Conread position:
               1-493
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               325
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               397, 25
               

               Conread position:
               1-494
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               327
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               190, 111
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               321
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               323
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               156, 5
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               325
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               122, 46
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 257
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 69
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               322
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               105, 100
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 258
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               317
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               291, 111
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               331
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               192, 255
               

               Conread position:
               1-499
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 56
               

               Conread position:
               2-376
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               266
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               57, 101
               

               Conread position:
               2-394
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               104, 37
               

               Conread position:
               2-497
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               318
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               82, 77
               

               Conread position:
               3-251
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               179, 119
               

               Conread position:
               3-262
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               167, 107
               

               Conread position:
               3-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               197, 131
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               297
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               30, 23
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 23
               

               Conread position:
               3-491
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               154, 162
               

               Conread position:
               3-499
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 54
               

               Conread position:
               4-497
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               320
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               41, 47
               

               Conread position:
               6-252
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               6-454
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               298
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               218, 47
               

               Conread position:
               10-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               69, 122
               

               Conread position:
               11-345
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               127, 18
               

               Conread position:
               16-493
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               307
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               305, 43
               

               Conread position:
               27-371
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               28-416
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               259
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               37-490
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               359, 10
               

               Conread position:
               44-332
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               22, 108
               

               Conread position:
               61-337
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               73-499
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               332, 39
               

               Conread position:
               77-497
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               288
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               45, 121
               

               Conread position:
               105-490
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 141
               

               Conread position:
               109-452
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               120-337
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 138
               

               Conread position:
               134-499
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               69, 13
               
Show alignments to all cow chromosomes.