Cow genome map


           Conread name:
           Pla1-C0000028_H02
        

               Conread position:
               1-143
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               60, 50
               

               Conread position:
               1-288
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               192, 28
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               188, 81
               

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               135, 179
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               370, 118
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               266
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               1-397
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               1-442
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               397, 127
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               84, 93
               

               Conread position:
               1-478
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               63, 181
               

               Conread position:
               1-479
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 51
               

               Conread position:
               1-481
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               321
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               61, 13
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               321
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               121, 235
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 13
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               322
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               150, 97
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               318
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               321
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               359, 15
               

               Conread position:
               1-494
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               322
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               210, 15
               

               Conread position:
               1-494
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               319
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               388, 69
               

               Conread position:
               1-496
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               362
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               64, 122
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               377, 69
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               324
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               122, 192
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               326
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               319
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               156, 137
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               319
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               44, 249
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               320
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               82, 252
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               323
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               111, 257
               

               Conread position:
               1-499
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               325
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               60, 51
               

               Conread position:
               1-499
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               327
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               171, 42
               

               Conread position:
               2-131
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               2-391
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               61, 37
               

               Conread position:
               2-455
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               363, 254
               

               Conread position:
               2-497
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               323
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               3-317
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 115
               

               Conread position:
               5-497
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               152, 75
               

               Conread position:
               6-312
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               91, 149
               

               Conread position:
               6-494
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               326
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               7-476
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               118, 75
               

               Conread position:
               8-498
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               319
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               217, 104
               

               Conread position:
               8-499
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               316
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               185, 197
               

               Conread position:
               10-497
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               147, 102
               

               Conread position:
               10-497
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               16-394
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               257
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               45, 41
               

               Conread position:
               20-234
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               211, 37
               

               Conread position:
               26-394
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               27-496
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               299
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               35, 174
               

               Conread position:
               55-330
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               55-389
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 77
               

               Conread position:
               73-499
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               363, 39
               

               Conread position:
               87-405
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               156, 201
               

               Conread position:
               100-497
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 44
               

               Conread position:
               105-494
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 137
               

               Conread position:
               140-496
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               227, 19
               

               Conread position:
               141-499
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               255, 97
               

               Conread position:
               145-497
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               251, 103
               

               Conread position:
               171-493
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               234, 83
               

               Conread position:
               182-499
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               268-498
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               185, 32
               

               Conread position:
               296-494
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               77, 68
               
Show alignments to all cow chromosomes.