Cow genome map

Conread name: Pla1-C0000028_H02

Conread position: 1-226
Cow position: chr17:54399-54175 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 150
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 216, 98

Conread position: 1-234
Cow position: chr17:31950993-31950769 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 1-238
Cow position: chr17:6611442-6611205 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-334
Cow position: chr17:32297084-32296759 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 102, 75

Conread position: 1-337
Cow position: chr17:2077950-2077621 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 24

Conread position: 1-351
Cow position: chr17:6120761-6121099 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 31, 25

Conread position: 1-394
Cow position: chr17:14215982-14215595 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 192, 204

Conread position: 1-485
Cow position: chr17:15436827-15437307 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 317
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 156, 246

Conread position: 1-487
Cow position: chr17:20086719-20086249 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 315
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 189, 45

Conread position: 1-491
Cow position: chr17:2580670-2581151 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 319
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 117, 69

Conread position: 1-491
Cow position: chr17:11086681-11086198 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 324
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 124, 249

Conread position: 1-494
Cow position: chr17:23038626-23039095 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 313
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 397, 15

Conread position: 1-496
Cow position: chr17:6260906-6261393 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 1-497
Cow position: chr17:2247042-2246552 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 304
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 112, 13

Conread position: 1-497
Cow position: chr17:6069596-6070078 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 319
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 397, 79

Conread position: 1-497
Cow position: chr17:19267781-19267310 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 321
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 132, 165

Conread position: 1-497
Cow position: chr17:23323407-23322913 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 248

Conread position: 1-497
Cow position: chr17:27793733-27793248 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 325
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 61, 75

Conread position: 1-497
Cow position: chr17:34157165-34157657 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 196

Conread position: 1-497
Cow position: chr17:40805853-40806342 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 330
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 85, 79

Conread position: 1-497
Cow position: chr17:43989547-43990037 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 319
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 173, 202

Conread position: 1-499
Cow position: chr17:4604911-4605396 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 318
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 304, 56

Conread position: 1-499
Cow position: chr17:33381524-33381048 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 328
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 196, 56

Conread position: 2-311
Cow position: chr17:14296223-14295925 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 198
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 2-484
Cow position: chr17:4168229-4168693 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 55

Conread position: 2-494
Cow position: chr17:11748784-11749259 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 319
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 73, 82

Conread position: 2-494
Cow position: chr17:22235576-22236071 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 333
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 170

Conread position: 2-497
Cow position: chr17:24028956-24028467 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 318
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 113

Conread position: 3-154
Cow position: chr17:31229346-31229194 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 3-199
Cow position: chr17:9243113-9243306 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 3-493
Cow position: chr17:7942020-7941547 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 49

Conread position: 3-497
Cow position: chr17:14240547-14241040 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 20

Conread position: 3-497
Cow position: chr17:15851736-15852228 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 319
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 125, 248

Conread position: 6-490
Cow position: chr17:14039991-14039509 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 303
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 93

Conread position: 6-497
Cow position: chr17:182626-183106 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 309
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 197, 92

Conread position: 11-226
Cow position: chr17:36186268-36186053 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 165, 117

Conread position: 12-499
Cow position: chr17:6913650-6913185 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 323
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 183

Conread position: 13-317
Cow position: chr17:13878522-13878228 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 189, 76

Conread position: 55-394
Cow position: chr17:9813813-9814153 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 108

Conread position: 66-499
Cow position: chr17:38946457-38946889 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 286
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 143

Conread position: 83-499
Cow position: chr17:19899152-19899561 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 277
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 315, 29

Conread position: 104-499
Cow position: chr17:1538585-1538213 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 275
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 292, 120

Conread position: 114-497
Cow position: chr17:28027345-28026969 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 242
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 183, 132

Conread position: 117-397
Cow position: chr17:18592765-18593032 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 66, 46

Conread position: 126-461
Cow position: chr17:733176-732844 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 214
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 9, 123

Conread position: 172-494
Cow position: chr17:39453313-39453626 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 211
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 73

Conread position: 189-474
Cow position: chr17:36001819-36001539 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 188
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 66

Show alignments to all cow chromosomes.