Cow genome map

Conread name: Pla1-C0000028_H02

Conread position: 1-150
Cow position: chr2:22340411-22340264 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 47

Conread position: 1-198
Cow position: chr2:73174406-73174205 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 56

Conread position: 1-199
Cow position: chr2:39933783-39933979 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 1-206
Cow position: chr2:50982655-50982446 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 1-240
Cow position: chr2:19077484-19077717 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 63, 39

Conread position: 1-260
Cow position: chr2:59412992-59412735 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 156, 163

Conread position: 1-332
Cow position: chr2:74494139-74493828 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 218
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 156

Conread position: 1-336
Cow position: chr2:47602564-47602234 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 222
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 322, 245

Conread position: 1-339
Cow position: chr2:46534396-46534071 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 221
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 32, 111

Conread position: 1-341
Cow position: chr2:63291269-63290948 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 224
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 85, 13

Conread position: 1-380
Cow position: chr2:77129803-77129440 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 145

Conread position: 1-394
Cow position: chr2:17424553-17424946 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 261
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 120, 210

Conread position: 1-394
Cow position: chr2:49628478-49628864 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 256
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 192, 110

Conread position: 1-396
Cow position: chr2:34051858-34052247 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 0

Conread position: 1-396
Cow position: chr2:64224039-64223643 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 260
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 25

Conread position: 1-491
Cow position: chr2:19012055-19012540 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 317
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 255

Conread position: 1-491
Cow position: chr2:42670004-42669516 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 317
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 343, 99

Conread position: 1-493
Cow position: chr2:82369423-82369880 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 334
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 60, 113

Conread position: 1-494
Cow position: chr2:9958366-9957885 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 310
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 411, 185

Conread position: 1-494
Cow position: chr2:20030126-20030605 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 110

Conread position: 1-494
Cow position: chr2:32656347-32656825 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 306
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 147, 126

Conread position: 1-494
Cow position: chr2:54738192-54738676 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 320
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 35, 16

Conread position: 1-496
Cow position: chr2:13045012-13044518 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 315
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 343, 247

Conread position: 1-496
Cow position: chr2:35356718-35357184 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 317
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 353, 20

Conread position: 1-497
Cow position: chr2:281990-281496 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 323
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 115, 185

Conread position: 1-497
Cow position: chr2:289081-288596 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 323
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 120, 52

Conread position: 1-497
Cow position: chr2:2087465-2086978 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 314
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 350, 229

Conread position: 1-497
Cow position: chr2:4402457-4401960 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 328
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 182, 46

Conread position: 1-497
Cow position: chr2:8119245-8119732 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 217

Conread position: 1-497
Cow position: chr2:10185527-10185037 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 322
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 134, 245

Conread position: 1-497
Cow position: chr2:10610945-10610454 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 313
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 192, 204

Conread position: 1-497
Cow position: chr2:24925266-24925756 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 326
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 122, 174

Conread position: 1-497
Cow position: chr2:25028591-25028114 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 318
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 192, 97

Conread position: 1-497
Cow position: chr2:25887846-25887358 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 324
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 79, 83

Conread position: 1-497
Cow position: chr2:45938981-45938510 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 309
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 331, 141

Conread position: 1-497
Cow position: chr2:52617176-52617666 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 314
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 411, 245

Conread position: 1-497
Cow position: chr2:55483450-55482967 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 317
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 109

Conread position: 1-497
Cow position: chr2:57336246-57336737 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 315
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 182, 204

Conread position: 1-497
Cow position: chr2:65937531-65937037 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 321
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 50

Conread position: 1-497
Cow position: chr2:80292052-80291572 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 324
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 171, 158

Conread position: 1-497
Cow position: chr2:81257869-81258368 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 323
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 122, 236

Conread position: 1-499
Cow position: chr2:38801096-38800621 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 334
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 31, 25

Conread position: 1-499
Cow position: chr2:41687471-41687960 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 111

Conread position: 2-217
Cow position: chr2:861807-861591 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 120, 208

Conread position: 2-227
Cow position: chr2:1645065-1645289 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 156

Conread position: 2-295
Cow position: chr2:72234259-72233974 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 248, 67

Conread position: 2-365
Cow position: chr2:26885482-26885831 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 299, 24

Conread position: 2-394
Cow position: chr2:16815661-16815277 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 259
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 24

Conread position: 2-397
Cow position: chr2:46512104-46512475 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 274, 109

Conread position: 2-491
Cow position: chr2:6962219-6962695 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 318
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 126

Conread position: 2-493
Cow position: chr2:26070263-26069793 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 55

Conread position: 2-493
Cow position: chr2:41779927-41780381 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 39

Conread position: 2-494
Cow position: chr2:28640142-28639662 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 302
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 189, 200

Conread position: 3-252
Cow position: chr2:1199020-1198779 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 195, 54

Conread position: 3-260
Cow position: chr2:65255517-65255258 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 176, 120

Conread position: 3-382
Cow position: chr2:25715881-25716253 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 116, 144

Conread position: 3-462
Cow position: chr2:31899401-31898955 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 300
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 392, 56

Conread position: 3-497
Cow position: chr2:36981082-36981580 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 310
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 125, 179

Conread position: 3-499
Cow position: chr2:25766718-25767191 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 320
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 375, 30

Conread position: 10-494
Cow position: chr2:44934269-44933801 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 306
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 181, 8

Conread position: 11-259
Cow position: chr2:79245995-79245739 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 91

Conread position: 11-392
Cow position: chr2:44966295-44966668 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 247
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 123, 92

Conread position: 11-492
Cow position: chr2:49625195-49624744 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 318
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 318, 80

Conread position: 16-373
Cow position: chr2:39624760-39625109 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 242
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 23

Conread position: 27-461
Cow position: chr2:25743266-25743692 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 281
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 135

Conread position: 29-394
Cow position: chr2:1209151-1208805 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 169, 73

Conread position: 32-382
Cow position: chr2:2042191-2042523 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 8

Conread position: 39-481
Cow position: chr2:2875108-2874706 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 301
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 207, 18

Conread position: 41-494
Cow position: chr2:15923468-15923890 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 296
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 355, 71

Conread position: 42-497
Cow position: chr2:52063509-52063950 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 299
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 318, 30

Conread position: 45-493
Cow position: chr2:58988503-58988935 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 302
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 123

Conread position: 55-394
Cow position: chr2:2481365-2481023 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 56, 15

Conread position: 60-333
Cow position: chr2:27085377-27085121 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 76-499
Cow position: chr2:43054651-43055054 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 296
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 213, 73

Conread position: 83-497
Cow position: chr2:50078351-50078753 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 278
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 269, 45

Conread position: 84-394
Cow position: chr2:36082592-36082890 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 35, 87

Conread position: 92-335
Cow position: chr2:44441317-44441088 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 46

Conread position: 96-499
Cow position: chr2:7326493-7326891 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 98

Conread position: 105-497
Cow position: chr2:54693756-54694128 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 257
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 88, 54

Conread position: 111-499
Cow position: chr2:23791743-23791358 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 247
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 30

Conread position: 124-499
Cow position: chr2:74112979-74112622 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 243
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 16

Conread position: 131-394
Cow position: chr2:31448673-31448925 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 117, 0

Conread position: 134-497
Cow position: chr2:24926252-24926605 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 231
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 226, 37

Conread position: 152-391
Cow position: chr2:53429797-53430036 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 94

Conread position: 290-499
Cow position: chr2:74623922-74623711 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 114, 31

Conread position: 292-493
Cow position: chr2:63518956-63519157 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 17

Show alignments to all cow chromosomes.