Cow genome map
| Conread name: | Pla1-C0000028_H02 |
| Conread position: | 1-319 |
| Cow position: | chr20:9127536-9127225 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 52 |
| Conread position: | 1-368 |
| Cow position: | chr20:14742012-14741653 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 44, 22 |
| Conread position: | 1-491 |
| Cow position: | chr20:29949737-29950228 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 121, 20 |
| Conread position: | 1-492 |
| Cow position: | chr20:12569741-12570212 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 327 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 83, 110 |
| Conread position: | 1-494 |
| Cow position: | chr20:18967718-18968186 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 326 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 1-494 |
| Cow position: | chr20:19439134-19439622 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 163 |
| Conread position: | 1-496 |
| Cow position: | chr20:15293209-15293688 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 320 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 359, 69 |
| Conread position: | 1-496 |
| Cow position: | chr20:23468443-23467960 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 1-497 |
| Cow position: | chr20:823990-824476 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 314 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 411, 203 |
| Conread position: | 1-497 |
| Cow position: | chr20:5536156-5536653 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 94 |
| Conread position: | 1-497 |
| Cow position: | chr20:10854119-10853643 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 97, 126 |
| Conread position: | 1-497 |
| Cow position: | chr20:13764121-13764604 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 326 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 351, 25 |
| Conread position: | 1-497 |
| Cow position: | chr20:17660523-17660036 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 1-497 |
| Cow position: | chr20:21915850-21916346 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 325 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 83, 166 |
| Conread position: | 1-497 |
| Cow position: | chr20:27870423-27870917 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 83 |
| Conread position: | 1-499 |
| Cow position: | chr20:30429489-30429983 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 323 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 333, 248 |
| Conread position: | 2-254 |
| Cow position: | chr20:38917577-38917824 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 192, 55 |
| Conread position: | 2-494 |
| Cow position: | chr20:42061292-42060815 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 313 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 171, 34 |
| Conread position: | 2-497 |
| Cow position: | chr20:30686793-30687294 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 316 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 119, 248 |
| Conread position: | 3-332 |
| Cow position: | chr20:871786-871466 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 3-497 |
| Cow position: | chr20:15096668-15096186 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 311 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 86, 54 |
| Conread position: | 4-397 |
| Cow position: | chr20:36702616-36702999 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 6-493 |
| Cow position: | chr20:40872896-40872409 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 171 |
| Conread position: | 10-382 |
| Cow position: | chr20:42325936-42326312 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 97 |
| Conread position: | 11-483 |
| Cow position: | chr20:5937913-5937461 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 314 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 166, 76 |
| Conread position: | 16-356 |
| Cow position: | chr20:22016900-22017218 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 16-497 |
| Cow position: | chr20:21395154-21395620 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 68 |
| Conread position: | 17-494 |
| Cow position: | chr20:20410324-20409870 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 68 |
| Conread position: | 18-242 |
| Cow position: | chr20:40357700-40357924 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 189, 151 |
| Conread position: | 20-205 |
| Cow position: | chr20:35157514-35157695 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 21-391 |
| Cow position: | chr20:6911032-6910677 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 23-332 |
| Cow position: | chr20:27338440-27338743 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 186, 167 |
| Conread position: | 43-497 |
| Cow position: | chr20:12437159-12436711 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 291 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 255, 5 |
| Conread position: | 59-461 |
| Cow position: | chr20:21151965-21152341 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 338, 98 |
| Conread position: | 70-498 |
| Cow position: | chr20:20390010-20389582 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 284, 25 |
| Conread position: | 74-499 |
| Cow position: | chr20:926115-925701 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 244, 113 |
| Conread position: | 99-493 |
| Cow position: | chr20:5691891-5691519 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 305, 10 |
| Conread position: | 180-497 |
| Cow position: | chr20:35126055-35126371 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 24, 71 |
Show alignments to all cow chromosomes.