Cow genome map
| Conread name: | Pla1-C0000028_H02 |
| Conread position: | 1-168 |
| Cow position: | chr22:9045292-9045456 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-221 |
| Cow position: | chr22:25335053-25334846 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 122, 52 |
| Conread position: | 1-334 |
| Cow position: | chr22:23801042-23800730 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 296, 34 |
| Conread position: | 1-337 |
| Cow position: | chr22:8120919-8120600 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-344 |
| Cow position: | chr22:44492214-44492551 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 61, 75 |
| Conread position: | 1-369 |
| Cow position: | chr22:32383545-32383194 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 1-388 |
| Cow position: | chr22:42503598-42503976 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 290, 133 |
| Conread position: | 1-413 |
| Cow position: | chr22:18028447-18028857 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-491 |
| Cow position: | chr22:34169500-34169979 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 137 |
| Conread position: | 1-494 |
| Cow position: | chr22:13547611-13547129 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 327 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 147, 79 |
| Conread position: | 1-494 |
| Cow position: | chr22:33351841-33352308 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 1-497 |
| Cow position: | chr22:538265-538758 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 329 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 123, 97 |
| Conread position: | 1-497 |
| Cow position: | chr22:3277198-3276707 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-497 |
| Cow position: | chr22:10908677-10908186 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-497 |
| Cow position: | chr22:17327295-17326808 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 127 |
| Conread position: | 1-497 |
| Cow position: | chr22:21195330-21194848 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 321 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 192, 79 |
| Conread position: | 1-497 |
| Cow position: | chr22:27308615-27308128 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 111 |
| Conread position: | 1-497 |
| Cow position: | chr22:31333886-31333399 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 325 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 134, 246 |
| Conread position: | 1-497 |
| Cow position: | chr22:36860378-36859899 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 317 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 397, 186 |
| Conread position: | 1-497 |
| Cow position: | chr22:39468357-39467868 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 327 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 117, 25 |
| Conread position: | 1-497 |
| Cow position: | chr22:42992336-42992825 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 326 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 1-497 |
| Cow position: | chr22:44368311-44367832 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 319 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 192, 91 |
| Conread position: | 1-497 |
| Cow position: | chr22:44397594-44398079 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 109 |
| Conread position: | 1-497 |
| Cow position: | chr22:44935131-44935612 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 367, 109 |
| Conread position: | 2-199 |
| Cow position: | chr22:40721645-40721849 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 2-227 |
| Cow position: | chr22:23945247-23945037 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 2-474 |
| Cow position: | chr22:31118080-31117626 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 309 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 116, 25 |
| Conread position: | 2-499 |
| Cow position: | chr22:16438604-16439077 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 100 |
| Conread position: | 3-499 |
| Cow position: | chr22:10304166-10303691 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 107, 11 |
| Conread position: | 4-446 |
| Cow position: | chr22:18815201-18814767 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 289 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 361, 106 |
| Conread position: | 6-497 |
| Cow position: | chr22:290536-290053 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 321 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 46, 202 |
| Conread position: | 6-497 |
| Cow position: | chr22:46580553-46580068 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 321 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 140, 95 |
| Conread position: | 10-339 |
| Cow position: | chr22:9116365-9116690 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 148, 53 |
| Conread position: | 10-497 |
| Cow position: | chr22:35906220-35905736 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 311 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 181, 91 |
| Conread position: | 11-499 |
| Cow position: | chr22:38318777-38318310 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 112 |
| Conread position: | 18-380 |
| Cow position: | chr22:20300271-20300622 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 26-497 |
| Cow position: | chr22:35670479-35670021 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 167, 143 |
| Conread position: | 27-467 |
| Cow position: | chr22:45510354-45509932 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 12, 86 |
| Conread position: | 28-393 |
| Cow position: | chr22:4066344-4065999 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 240, 89 |
| Conread position: | 29-393 |
| Cow position: | chr22:39629953-39630282 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 68, 28 |
| Conread position: | 33-339 |
| Cow position: | chr22:27300076-27299769 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 48-497 |
| Cow position: | chr22:21590626-21591072 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 87, 202 |
| Conread position: | 99-373 |
| Cow position: | chr22:43877055-43877324 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 28, 63 |
| Conread position: | 102-394 |
| Cow position: | chr22:44458207-44458493 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 16, 148 |
| Conread position: | 105-490 |
| Cow position: | chr22:44518370-44517999 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 75 |
| Conread position: | 148-446 |
| Cow position: | chr22:46035153-46035437 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 286, 23 |
Show alignments to all cow chromosomes.