Cow genome map
| Conread name: | Pla1-C0000028_H02 |
| Conread position: | 1-220 |
| Cow position: | chr24:40101649-40101437 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 40, 112 |
| Conread position: | 1-329 |
| Cow position: | chr24:29305068-29304746 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 239, 0 |
| Conread position: | 1-332 |
| Cow position: | chr24:17300656-17300351 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 134, 73 |
| Conread position: | 1-337 |
| Cow position: | chr24:14389288-14388965 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 145, 164 |
| Conread position: | 1-379 |
| Cow position: | chr24:36480709-36480352 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-394 |
| Cow position: | chr24:29408458-29408074 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 25 |
| Conread position: | 1-446 |
| Cow position: | chr24:11151992-11151553 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 288 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 202, 189 |
| Conread position: | 1-476 |
| Cow position: | chr24:25467383-25466930 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 321 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 1-490 |
| Cow position: | chr24:13179770-13179293 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 411, 45 |
| Conread position: | 1-491 |
| Cow position: | chr24:12087454-12087929 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 322 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 156, 127 |
| Conread position: | 1-493 |
| Cow position: | chr24:5888004-5887522 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 24 |
| Conread position: | 1-496 |
| Cow position: | chr24:147364-146877 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 319 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 73, 110 |
| Conread position: | 1-497 |
| Cow position: | chr24:6023860-6023352 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 100, 185 |
| Conread position: | 1-497 |
| Cow position: | chr24:9435694-9435214 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 1-497 |
| Cow position: | chr24:13233503-13233984 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 328 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-497 |
| Cow position: | chr24:14383388-14382893 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 304 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 134, 109 |
| Conread position: | 1-497 |
| Cow position: | chr24:19702743-19703222 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 321 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 182, 153 |
| Conread position: | 1-497 |
| Cow position: | chr24:19834642-19835142 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 323 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 109, 178 |
| Conread position: | 2-178 |
| Cow position: | chr24:17420651-17420828 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 2-212 |
| Cow position: | chr24:11938678-11938465 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 2-244 |
| Cow position: | chr24:36558519-36558291 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 2-366 |
| Cow position: | chr24:17425489-17425145 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 112 |
| Conread position: | 3-252 |
| Cow position: | chr24:16097774-16098022 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 3-275 |
| Cow position: | chr24:7341220-7341489 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 61, 110 |
| Conread position: | 3-486 |
| Cow position: | chr24:12238539-12239009 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 305 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 291, 63 |
| Conread position: | 16-249 |
| Cow position: | chr24:6344208-6344435 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 17-491 |
| Cow position: | chr24:9545316-9545784 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 105, 86 |
| Conread position: | 26-462 |
| Cow position: | chr24:21031911-21031507 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 286 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 28-493 |
| Cow position: | chr24:4044979-4044523 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 299 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 386, 218 |
| Conread position: | 31-323 |
| Cow position: | chr24:10222894-10222613 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 273, 118 |
| Conread position: | 36-354 |
| Cow position: | chr24:13112945-13113250 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 22, 28 |
| Conread position: | 38-499 |
| Cow position: | chr24:17203835-17203397 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 311 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 176, 88 |
| Conread position: | 51-468 |
| Cow position: | chr24:11589260-11588840 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 274 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 71, 59 |
| Conread position: | 57-382 |
| Cow position: | chr24:16875906-16875586 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 57-499 |
| Cow position: | chr24:12127812-12127373 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 274 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 64, 78 |
| Conread position: | 59-498 |
| Cow position: | chr24:17279081-17278651 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 114, 44 |
| Conread position: | 81-491 |
| Cow position: | chr24:8606142-8606550 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 98-499 |
| Cow position: | chr24:18868518-18868134 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 149 |
| Conread position: | 100-376 |
| Cow position: | chr24:14277868-14277604 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 101-394 |
| Cow position: | chr24:12334385-12334099 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 140-491 |
| Cow position: | chr24:22972449-22972794 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 212, 23 |
| Conread position: | 143-373 |
| Cow position: | chr24:6197796-6198021 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 150, 36 |
| Conread position: | 209-491 |
| Cow position: | chr24:6036442-6036718 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 203, 43 |
Show alignments to all cow chromosomes.