Cow genome map
| Conread name: | Pla1-C0000028_H02 |
| Conread position: | 1-155 |
| Cow position: | chr27:2075043-2075197 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-394 |
| Cow position: | chr27:16552030-16552432 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 245, 95 |
| Conread position: | 1-491 |
| Cow position: | chr27:5912079-5912561 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 117, 189 |
| Conread position: | 1-491 |
| Cow position: | chr27:13898484-13898956 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 317 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 105, 97 |
| Conread position: | 1-494 |
| Cow position: | chr27:3104896-3105384 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 324 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 1-496 |
| Cow position: | chr27:27664163-27664645 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 121, 56 |
| Conread position: | 1-497 |
| Cow position: | chr27:1210515-1211007 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 318 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 156, 121 |
| Conread position: | 1-497 |
| Cow position: | chr27:3234373-3233871 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 332 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 111, 178 |
| Conread position: | 1-497 |
| Cow position: | chr27:9330894-9331385 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 109 |
| Conread position: | 1-497 |
| Cow position: | chr27:15636184-15635692 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 326 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 156, 171 |
| Conread position: | 1-499 |
| Cow position: | chr27:28892759-28893261 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 208, 58 |
| Conread position: | 2-368 |
| Cow position: | chr27:7419893-7420238 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 2-497 |
| Cow position: | chr27:15274901-15274417 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 331 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 137, 78 |
| Conread position: | 2-498 |
| Cow position: | chr27:2622072-2622546 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 2-498 |
| Cow position: | chr27:16611802-16611320 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 47 |
| Conread position: | 3-391 |
| Cow position: | chr27:23904830-23904454 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 125 |
| Conread position: | 3-393 |
| Cow position: | chr27:6123851-6123478 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 195, 45 |
| Conread position: | 3-397 |
| Cow position: | chr27:1575762-1576148 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 19 |
| Conread position: | 3-499 |
| Cow position: | chr27:30911397-30911882 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 66 |
| Conread position: | 6-356 |
| Cow position: | chr27:7792672-7792344 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 11-494 |
| Cow position: | chr27:14660875-14661334 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 16-264 |
| Cow position: | chr27:27906257-27906500 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 102, 120 |
| Conread position: | 27-368 |
| Cow position: | chr27:28931016-28930689 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 27-494 |
| Cow position: | chr27:22150135-22150589 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 307 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 187, 45 |
| Conread position: | 27-499 |
| Cow position: | chr27:17818008-17818471 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 134 |
| Conread position: | 29-497 |
| Cow position: | chr27:26326257-26326712 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 302 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 331, 81 |
| Conread position: | 32-491 |
| Cow position: | chr27:28079607-28080052 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 44-391 |
| Cow position: | chr27:23741763-23741438 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 170, 38 |
| Conread position: | 57-497 |
| Cow position: | chr27:12748246-12748687 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 65, 198 |
| Conread position: | 99-389 |
| Cow position: | chr27:25629242-25629519 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 134-499 |
| Cow position: | chr27:16967227-16966882 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 276, 19 |
| Conread position: | 177-497 |
| Cow position: | chr27:8199144-8199459 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 221, 71 |
Show alignments to all cow chromosomes.