Cow genome map
| Conread name: | Pla1-C0000028_H02 | 
| Conread position: | 1-242 | 
| Cow position: | chr3:35964070-35964311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-243 | 
| Cow position: | chr3:63255226-63255467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 97, 55 | 
| Conread position: | 1-245 | 
| Cow position: | chr3:81532717-81532961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-252 | 
| Cow position: | chr3:24193183-24192943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 1-252 | 
| Cow position: | chr3:60081836-60081590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 62, 23 | 
| Conread position: | 1-260 | 
| Cow position: | chr3:79315015-79315264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 1-261 | 
| Cow position: | chr3:71230642-71230389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 239, 56 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:48229388-48229127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 194, 78 | 
| Conread position: | 1-301 | 
| Cow position: | chr3:33634188-33634487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 190, 47 | 
| Conread position: | 1-332 | 
| Cow position: | chr3:46017130-46017459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 149, 78 | 
| Conread position: | 1-337 | 
| Cow position: | chr3:59862465-59862785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 121, 153 | 
| Conread position: | 1-368 | 
| Cow position: | chr3:64849088-64848739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 228, 0 | 
| Conread position: | 1-377 | 
| Cow position: | chr3:68302536-68302181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 35, 25 | 
| Conread position: | 1-379 | 
| Cow position: | chr3:28676406-28676763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 213, 47 | 
| Conread position: | 1-391 | 
| Cow position: | chr3:45386944-45387332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 223, 91 | 
| Conread position: | 1-393 | 
| Cow position: | chr3:10240747-10241123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 343, 145 | 
| Conread position: | 1-394 | 
| Cow position: | chr3:6495571-6495959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 98, 22 | 
| Conread position: | 1-394 | 
| Cow position: | chr3:38867402-38867788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 156, 127 | 
| Conread position: | 1-394 | 
| Cow position: | chr3:48843338-48843727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 209, 195 | 
| Conread position: | 1-394 | 
| Cow position: | chr3:72631149-72631533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 134, 246 | 
| Conread position: | 1-397 | 
| Cow position: | chr3:35192637-35193009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 64, 99 | 
| Conread position: | 1-452 | 
| Cow position: | chr3:50916427-50916875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 120, 183 | 
| Conread position: | 1-486 | 
| Cow position: | chr3:74058615-74059090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 413, 99 | 
| Conread position: | 1-491 | 
| Cow position: | chr3:37970130-37970615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 192, 204 | 
| Conread position: | 1-491 | 
| Cow position: | chr3:48058277-48057792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 411, 247 | 
| Conread position: | 1-491 | 
| Cow position: | chr3:56146400-56146873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 501 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 44, 51 | 
| Conread position: | 1-494 | 
| Cow position: | chr3:30617836-30617352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 31, 25 | 
| Conread position: | 1-494 | 
| Cow position: | chr3:64027051-64026566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 498 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 192, 204 | 
| Conread position: | 1-494 | 
| Cow position: | chr3:71687167-71687650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 503 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 25, 189 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:595221-595701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 498 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 447, 186 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:5884619-5885103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 503 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 14, 51 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:5994001-5993513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 506 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 116, 176 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:6783452-6783943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 501 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 202, 148 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:7478835-7478340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 505 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 146 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:18812585-18813073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 48 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:18860501-18860992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 67, 76 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:19800088-19799604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 192, 204 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:19879730-19880219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 192, 121 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:20382112-20382611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 192, 204 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:23289246-23288760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 133, 31 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:34029841-34029346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 506 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 120, 252 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:36877572-36877086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 505 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 115, 251 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:40824477-40824966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 142 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:47080326-47079835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 121 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:49136485-49135991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 505 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 122, 251 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:53516688-53517184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 503 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 73, 68 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:57483643-57483151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 505 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 251 | 
| Conread position: | 1-497 | 
| Cow position: | chr3:66621267-66621771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 199, 121 | 
| Conread position: | 1-498 | 
| Cow position: | chr3:4667187-4667670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 89, 25 | 
| Conread position: | 1-498 | 
| Cow position: | chr3:41209518-41209026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 501 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 192, 204 | 
| Conread position: | 1-499 | 
| Cow position: | chr3:82638190-82638666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 56 | 
| Conread position: | 2-260 | 
| Cow position: | chr3:72783861-72783594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 61, 14 | 
| Conread position: | 2-379 | 
| Cow position: | chr3:82933875-82934236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 2-462 | 
| Cow position: | chr3:64823189-64823643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 168, 173 | 
| Conread position: | 2-493 | 
| Cow position: | chr3:51939014-51938533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 503 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 43, 67 | 
| Conread position: | 2-494 | 
| Cow position: | chr3:29579713-29580181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 103, 77 | 
| Conread position: | 2-497 | 
| Cow position: | chr3:27919512-27920002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 122, 182 | 
| Conread position: | 3-263 | 
| Cow position: | chr3:27979960-27980229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 9, 118 | 
| Conread position: | 3-309 | 
| Cow position: | chr3:74226327-74226030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 243, 54 | 
| Conread position: | 3-396 | 
| Cow position: | chr3:83946034-83946424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 24 | 
| Conread position: | 3-397 | 
| Cow position: | chr3:21650064-21650435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 154, 45 | 
| Conread position: | 3-401 | 
| Cow position: | chr3:46922662-46922287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 3-497 | 
| Cow position: | chr3:31416106-31416591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 190, 202 | 
| Conread position: | 3-499 | 
| Cow position: | chr3:19832830-19832336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 506 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 216, 54 | 
| Conread position: | 4-499 | 
| Cow position: | chr3:10095512-10095971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 48 | 
| Conread position: | 5-394 | 
| Cow position: | chr3:25783544-25783166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 179, 54 | 
| Conread position: | 6-318 | 
| Cow position: | chr3:27691772-27692058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 50, 40 | 
| Conread position: | 6-494 | 
| Cow position: | chr3:56100593-56100118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 498 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 81, 134 | 
| Conread position: | 8-221 | 
| Cow position: | chr3:41039589-41039796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 175, 75 | 
| Conread position: | 8-497 | 
| Cow position: | chr3:2918558-2919039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 242 | 
| Conread position: | 9-196 | 
| Cow position: | chr3:79318791-79318975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 15, 7 | 
| Conread position: | 9-452 | 
| Cow position: | chr3:35476220-35475794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 26, 15 | 
| Conread position: | 10-212 | 
| Cow position: | chr3:15181450-15181651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 181, 16 | 
| Conread position: | 11-260 | 
| Cow position: | chr3:2214648-2214889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 43, 35 | 
| Conread position: | 11-388 | 
| Cow position: | chr3:68358230-68357877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 69, 99 | 
| Conread position: | 11-393 | 
| Cow position: | chr3:79117250-79117613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 21, 12 | 
| Conread position: | 11-497 | 
| Cow position: | chr3:52653549-52653088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 382, 59 | 
| Conread position: | 11-499 | 
| Cow position: | chr3:60263924-60263443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 498 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 46 | 
| Conread position: | 16-499 | 
| Cow position: | chr3:23066369-23065912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 89, 116 | 
| Conread position: | 26-341 | 
| Cow position: | chr3:57979506-57979219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 10, 55 | 
| Conread position: | 28-493 | 
| Cow position: | chr3:63002433-63001991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 73, 63 | 
| Conread position: | 30-393 | 
| Cow position: | chr3:7313354-7313002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 64, 111 | 
| Conread position: | 32-382 | 
| Cow position: | chr3:12760095-12760433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 279, 164 | 
| Conread position: | 34-394 | 
| Cow position: | chr3:29338785-29338433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 23 | 
| Conread position: | 42-394 | 
| Cow position: | chr3:24588332-24588000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 115, 38 | 
| Conread position: | 62-462 | 
| Cow position: | chr3:62317870-62317483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 78, 11 | 
| Conread position: | 66-499 | 
| Cow position: | chr3:33706761-33706357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 79 | 
| Conread position: | 82-497 | 
| Cow position: | chr3:23206705-23206299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 102, 56 | 
| Conread position: | 89-499 | 
| Cow position: | chr3:56910962-56911382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 63, 135 | 
| Conread position: | 101-394 | 
| Cow position: | chr3:37626165-37626467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 57, 168 | 
| Conread position: | 101-494 | 
| Cow position: | chr3:19720470-19720088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 277, 8 | 
| Conread position: | 103-491 | 
| Cow position: | chr3:8239885-8240260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 295, 60 | 
| Conread position: | 107-397 | 
| Cow position: | chr3:64888558-64888826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 119-499 | 
| Cow position: | chr3:76380856-76380489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 38 | 
| Conread position: | 127-493 | 
| Cow position: | chr3:79122389-79122037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 23, 82 | 
| Conread position: | 140-496 | 
| Cow position: | chr3:57537734-57538084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 67, 5 | 
| Conread position: | 145-452 | 
| Cow position: | chr3:57658529-57658822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 254, 22 | 
| Conread position: | 164-393 | 
| Cow position: | chr3:84900940-84900717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 50, 88 | 
| Conread position: | 164-492 | 
| Cow position: | chr3:43481043-43481365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 172, 36 | 
| Conread position: | 197-397 | 
| Cow position: | chr3:71146113-71145917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 17, 49 | 
| Conread position: | 212-490 | 
| Cow position: | chr3:62503420-62503694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 97, 42 | 
Show alignments to all cow chromosomes.
