Cow genome map
| Conread name: | Pla1-C0000028_H02 |
| Conread position: | 1-221 |
| Cow position: | chr7:46900849-46900629 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-241 |
| Cow position: | chr7:3548472-3548239 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-252 |
| Cow position: | chr7:43871722-43871974 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 1-257 |
| Cow position: | chr7:34546583-34546839 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-323 |
| Cow position: | chr7:57211372-57211688 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 176, 97 |
| Conread position: | 1-349 |
| Cow position: | chr7:20798220-20797891 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 95, 111 |
| Conread position: | 1-373 |
| Cow position: | chr7:1822327-1821953 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 147, 73 |
| Conread position: | 1-376 |
| Cow position: | chr7:53275-53626 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 272 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 56, 91 |
| Conread position: | 1-393 |
| Cow position: | chr7:66905944-66906331 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 134, 174 |
| Conread position: | 1-394 |
| Cow position: | chr7:67495326-67495704 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 1-490 |
| Cow position: | chr7:21233786-21233303 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 247 |
| Conread position: | 1-493 |
| Cow position: | chr7:13532684-13532208 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 317 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 397, 186 |
| Conread position: | 1-493 |
| Cow position: | chr7:50660125-50659656 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 452, 81 |
| Conread position: | 1-494 |
| Cow position: | chr7:41875054-41874583 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 102 |
| Conread position: | 1-497 |
| Cow position: | chr7:10430201-10429716 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 325 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 297, 108 |
| Conread position: | 1-497 |
| Cow position: | chr7:14138373-14137884 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 322 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 359, 142 |
| Conread position: | 1-497 |
| Cow position: | chr7:20514564-20514078 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 411, 109 |
| Conread position: | 1-497 |
| Cow position: | chr7:21986639-21987112 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 316 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 359, 71 |
| Conread position: | 1-497 |
| Cow position: | chr7:45947917-45947444 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 319 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 364, 109 |
| Conread position: | 1-497 |
| Cow position: | chr7:52763503-52763994 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 205 |
| Conread position: | 1-497 |
| Cow position: | chr7:55041268-55040777 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-497 |
| Cow position: | chr7:55536704-55536218 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 320 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 356, 137 |
| Conread position: | 1-497 |
| Cow position: | chr7:61578728-61579210 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 109 |
| Conread position: | 1-497 |
| Cow position: | chr7:64239782-64239283 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 318 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 122, 255 |
| Conread position: | 1-497 |
| Cow position: | chr7:65812043-65812532 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 317 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 411, 111 |
| Conread position: | 1-499 |
| Cow position: | chr7:6647443-6646960 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 411, 85 |
| Conread position: | 1-499 |
| Cow position: | chr7:57084168-57084636 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 56 |
| Conread position: | 1-499 |
| Cow position: | chr7:67027338-67026825 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 28 |
| Conread position: | 2-394 |
| Cow position: | chr7:26852676-26853041 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 2-397 |
| Cow position: | chr7:45958275-45958655 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 40, 57 |
| Conread position: | 2-497 |
| Cow position: | chr7:21311671-21312154 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 308 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 462, 118 |
| Conread position: | 2-499 |
| Cow position: | chr7:24709581-24709082 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 12 |
| Conread position: | 3-334 |
| Cow position: | chr7:13575514-13575842 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 3-445 |
| Cow position: | chr7:68845483-68845048 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 231, 50 |
| Conread position: | 3-493 |
| Cow position: | chr7:40124583-40125070 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 79 |
| Conread position: | 3-495 |
| Cow position: | chr7:54146756-54146289 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 318 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 71 |
| Conread position: | 3-497 |
| Cow position: | chr7:20774110-20773632 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 204, 152 |
| Conread position: | 5-310 |
| Cow position: | chr7:4162329-4162035 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 36 |
| Conread position: | 5-348 |
| Cow position: | chr7:14695260-14695577 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 37 |
| Conread position: | 10-317 |
| Cow position: | chr7:21096978-21096660 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 137 |
| Conread position: | 10-349 |
| Cow position: | chr7:66036399-66036731 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 236, 0 |
| Conread position: | 12-374 |
| Cow position: | chr7:41845520-41845183 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 16-497 |
| Cow position: | chr7:445028-444550 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 320 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 58, 113 |
| Conread position: | 20-497 |
| Cow position: | chr7:25419956-25420411 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 307 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 25-228 |
| Cow position: | chr7:3518399-3518600 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 27-452 |
| Cow position: | chr7:1609394-1608974 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 122, 223 |
| Conread position: | 27-497 |
| Cow position: | chr7:8143738-8143268 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 301 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 90, 227 |
| Conread position: | 53-358 |
| Cow position: | chr7:50910980-50910690 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 59-494 |
| Cow position: | chr7:24934275-24933853 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 5, 54 |
| Conread position: | 66-494 |
| Cow position: | chr7:54291476-54291887 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 150, 46 |
| Conread position: | 94-494 |
| Cow position: | chr7:1403170-1402786 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 269 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 190, 28 |
| Conread position: | 105-394 |
| Cow position: | chr7:60856732-60856458 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 108-370 |
| Cow position: | chr7:9941856-9942112 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 184, 52 |
| Conread position: | 150-491 |
| Cow position: | chr7:61809376-61809711 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 210, 21 |
| Conread position: | 204-497 |
| Cow position: | chr7:3126110-3126398 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 194, 44 |
| Conread position: | 247-499 |
| Cow position: | chr7:4154236-4153993 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 152, 35 |
Show alignments to all cow chromosomes.