Cow genome map
| Conread name: | Pla1-C0000028_H02 |
| Conread position: | 1-202 |
| Cow position: | chr8:22229263-22229063 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 122, 110 |
| Conread position: | 1-221 |
| Cow position: | chr8:34525809-34525592 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 65, 98 |
| Conread position: | 1-264 |
| Cow position: | chr8:22128981-22129239 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 144, 100 |
| Conread position: | 1-346 |
| Cow position: | chr8:28878422-28878757 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 1-352 |
| Cow position: | chr8:58185181-58184839 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 290, 72 |
| Conread position: | 1-390 |
| Cow position: | chr8:45184825-45185191 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 210, 147 |
| Conread position: | 1-394 |
| Cow position: | chr8:1320448-1320841 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 181, 204 |
| Conread position: | 1-397 |
| Cow position: | chr8:45112567-45112935 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 100, 46 |
| Conread position: | 1-452 |
| Cow position: | chr8:31984537-31984983 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 303 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 1-452 |
| Cow position: | chr8:32318143-32317699 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 1-476 |
| Cow position: | chr8:14583569-14583115 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 62, 40 |
| Conread position: | 1-490 |
| Cow position: | chr8:50995179-50995675 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 312 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 94, 151 |
| Conread position: | 1-491 |
| Cow position: | chr8:8911889-8912370 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 1-491 |
| Cow position: | chr8:14927474-14926995 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 340, 225 |
| Conread position: | 1-491 |
| Cow position: | chr8:17312438-17312943 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 325 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 199, 35 |
| Conread position: | 1-493 |
| Cow position: | chr8:12450433-12450933 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 322 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 73, 69 |
| Conread position: | 1-494 |
| Cow position: | chr8:14631261-14630771 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 191 |
| Conread position: | 1-494 |
| Cow position: | chr8:41644264-41643794 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 1-496 |
| Cow position: | chr8:8400705-8400210 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 326 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 50 |
| Conread position: | 1-496 |
| Cow position: | chr8:33589787-33590277 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 326 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 109, 176 |
| Conread position: | 1-497 |
| Cow position: | chr8:3855617-3855129 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 321 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 1-497 |
| Cow position: | chr8:5017589-5018073 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 326 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 104, 130 |
| Conread position: | 1-497 |
| Cow position: | chr8:10742259-10741750 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 334 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 65, 261 |
| Conread position: | 1-497 |
| Cow position: | chr8:21157383-21156894 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 325 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 206, 128 |
| Conread position: | 1-497 |
| Cow position: | chr8:22570900-22570409 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 318 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-497 |
| Cow position: | chr8:24914927-24914426 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 152 |
| Conread position: | 1-497 |
| Cow position: | chr8:25377391-25377872 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 326 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 280, 90 |
| Conread position: | 1-497 |
| Cow position: | chr8:25523808-25524287 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 307, 158 |
| Conread position: | 1-497 |
| Cow position: | chr8:25775263-25774753 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 338 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 111, 220 |
| Conread position: | 1-497 |
| Cow position: | chr8:32041354-32040867 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 319 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 156, 97 |
| Conread position: | 1-497 |
| Cow position: | chr8:32436676-32436184 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 316 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 192, 71 |
| Conread position: | 1-497 |
| Cow position: | chr8:33325456-33325946 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 315 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 73, 219 |
| Conread position: | 1-497 |
| Cow position: | chr8:39194809-39194318 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 1-497 |
| Cow position: | chr8:47660911-47660426 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 364, 126 |
| Conread position: | 1-497 |
| Cow position: | chr8:50358889-50358402 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 24 |
| Conread position: | 1-497 |
| Cow position: | chr8:60061808-60062304 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 314 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 63, 109 |
| Conread position: | 1-499 |
| Cow position: | chr8:47947467-47947983 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 342 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 178, 26 |
| Conread position: | 1-499 |
| Cow position: | chr8:55085945-55086424 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 311 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 357, 25 |
| Conread position: | 2-233 |
| Cow position: | chr8:8106438-8106200 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 145, 55 |
| Conread position: | 2-332 |
| Cow position: | chr8:46051589-46051915 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 133, 171 |
| Conread position: | 2-453 |
| Cow position: | chr8:45178244-45178658 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 314 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 368, 52 |
| Conread position: | 2-497 |
| Cow position: | chr8:3786047-3786525 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 155, 170 |
| Conread position: | 2-497 |
| Cow position: | chr8:50929706-50929210 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 319 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 3-211 |
| Cow position: | chr8:42429128-42429330 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 3-497 |
| Cow position: | chr8:19051859-19052347 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 107 |
| Conread position: | 3-497 |
| Cow position: | chr8:47068389-47067921 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 319 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 143, 20 |
| Conread position: | 4-497 |
| Cow position: | chr8:7162308-7162792 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 340, 106 |
| Conread position: | 6-260 |
| Cow position: | chr8:56487335-56487089 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 137, 58 |
| Conread position: | 7-497 |
| Cow position: | chr8:50960187-50959718 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 305 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 10-462 |
| Cow position: | chr8:42747367-42746934 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 286 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 344, 66 |
| Conread position: | 11-238 |
| Cow position: | chr8:11747768-11747996 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 11-396 |
| Cow position: | chr8:30032872-30032513 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 137, 92 |
| Conread position: | 31-491 |
| Cow position: | chr8:4687836-4688290 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 295 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 108, 79 |
| Conread position: | 33-341 |
| Cow position: | chr8:47427332-47427034 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 42-497 |
| Cow position: | chr8:46218300-46217859 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 290 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 264, 69 |
| Conread position: | 54-396 |
| Cow position: | chr8:40386436-40386108 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 172, 86 |
| Conread position: | 57-491 |
| Cow position: | chr8:6764827-6764400 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 61, 191 |
| Conread position: | 57-494 |
| Cow position: | chr8:6726518-6726094 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 283 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 83-328 |
| Cow position: | chr8:46322928-46322693 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 60 |
| Conread position: | 85-329 |
| Cow position: | chr8:20355588-20355826 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 95, 14 |
| Conread position: | 101-496 |
| Cow position: | chr8:38392132-38392521 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 5, 88 |
| Conread position: | 107-499 |
| Cow position: | chr8:21584699-21585086 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 169, 98 |
| Conread position: | 111-492 |
| Cow position: | chr8:34269277-34269655 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 138 |
| Conread position: | 112-497 |
| Cow position: | chr8:11834036-11834421 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 114-499 |
| Cow position: | chr8:12069782-12070150 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 122-497 |
| Cow position: | chr8:45794227-45793859 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 134-497 |
| Cow position: | chr8:35470839-35471197 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 142-436 |
| Cow position: | chr8:6378804-6378514 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 91, 11 |
| Conread position: | 163-394 |
| Cow position: | chr8:4941143-4941361 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 284-499 |
| Cow position: | chr8:42475595-42475808 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 178, 131 |
Show alignments to all cow chromosomes.