Cow genome map


           Conread name:
           Pla1-C0000028_H02
        

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 128
               

               Conread position:
               1-229
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               203, 0
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 124
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               156, 41
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               209, 140
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               103, 196
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               134, 248
               

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               136, 56
               

               Conread position:
               1-344
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               245, 0
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               42, 50
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               44, 50
               

               Conread position:
               1-397
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 22
               

               Conread position:
               1-446
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               130, 109
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               257
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               300
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               350, 39
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               361, 247
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               319
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               122, 65
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               320
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               156, 109
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               147, 56
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               134, 109
               

               Conread position:
               1-494
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               324
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               192, 201
               

               Conread position:
               1-494
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 52
               

               Conread position:
               1-494
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               319
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               96, 25
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               308
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               148, 129
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               317
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               192, 73
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               319
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               397, 109
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               336
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               156, 109
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               319
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               156, 164
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               325
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               192, 204
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               192, 204
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               317
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               71, 113
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               312
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               401, 153
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 204
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               320
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               312
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               280, 9
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 121
               

               Conread position:
               1-499
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 204
               

               Conread position:
               1-499
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               323
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               1-499
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               317
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               209, 195
               

               Conread position:
               1-499
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 56
               

               Conread position:
               1-499
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               325
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               195, 62
               

               Conread position:
               2-155
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               2-337
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               123, 55
               

               Conread position:
               2-446
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               296
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               81, 68
               

               Conread position:
               2-494
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               315
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               289, 221
               

               Conread position:
               3-243
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               132, 100
               

               Conread position:
               3-332
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               69, 125
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               73, 119
               

               Conread position:
               3-394
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               3-494
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               321
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               51, 89
               

               Conread position:
               3-497
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               323
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               119, 239
               

               Conread position:
               3-497
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               307
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               114, 271
               

               Conread position:
               4-499
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               311
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               136, 99
               

               Conread position:
               6-491
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               310
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               129, 63
               

               Conread position:
               6-497
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               325
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               151, 116
               

               Conread position:
               6-499
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               332, 90
               

               Conread position:
               7-252
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               8-394
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 247
               

               Conread position:
               9-264
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               54, 48
               

               Conread position:
               11-494
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               317
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               102, 169
               

               Conread position:
               11-494
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               423, 35
               

               Conread position:
               31-494
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 140
               

               Conread position:
               55-252
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               9, 100
               

               Conread position:
               57-497
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 86
               

               Conread position:
               63-414
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               335, 49
               

               Conread position:
               74-491
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               133, 92
               

               Conread position:
               80-452
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               318, 79
               

               Conread position:
               87-491
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 23
               

               Conread position:
               88-494
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               119, 102
               

               Conread position:
               92-485
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 49
               

               Conread position:
               96-335
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 153
               

               Conread position:
               116-494
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               164, 17
               
Show alignments to all cow chromosomes.