Cow genome map

Conread name: Pla1-C0000028_H02

Conread position: 1-173
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 1-240
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 82

Conread position: 1-249
Cow position:
Alignm length: 249
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 163
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-296
Cow position:
Alignm length: 302
Alignm identity: 172
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 191, 0

Conread position: 1-298
Cow position:
Alignm length: 298
Alignm identity: 194
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 131, 0

Conread position: 1-330
Cow position:
Alignm length: 331
Alignm identity: 217
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 25

Conread position: 1-332
Cow position:
Alignm length: 333
Alignm identity: 220
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 192, 204

Conread position: 1-390
Cow position:
Alignm length: 395
Alignm identity: 250
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 104

Conread position: 1-394
Cow position:
Alignm length: 396
Alignm identity: 259
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 139, 111

Conread position: 1-394
Cow position:
Alignm length: 399
Alignm identity: 264
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 67, 74

Conread position: 1-397
Cow position:
Alignm length: 399
Alignm identity: 260
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 343, 109

Conread position: 1-410
Cow position:
Alignm length: 414
Alignm identity: 281
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 366, 25

Conread position: 1-450
Cow position:
Alignm length: 457
Alignm identity: 295
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 162, 13

Conread position: 1-451
Cow position:
Alignm length: 458
Alignm identity: 301
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 280, 145

Conread position: 1-452
Cow position:
Alignm length: 458
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 69

Conread position: 1-487
Cow position:
Alignm length: 490
Alignm identity: 310
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 192, 204

Conread position: 1-490
Cow position:
Alignm length: 497
Alignm identity: 316
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 100, 204

Conread position: 1-491
Cow position:
Alignm length: 506
Alignm identity: 322
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 32, 25

Conread position: 1-491
Cow position:
Alignm length: 496
Alignm identity: 296
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 97

Conread position: 1-491
Cow position:
Alignm length: 495
Alignm identity: 311
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 111, 46

Conread position: 1-491
Cow position:
Alignm length: 495
Alignm identity: 302
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 39

Conread position: 1-491
Cow position:
Alignm length: 499
Alignm identity: 317
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 32, 21

Conread position: 1-491
Cow position:
Alignm length: 497
Alignm identity: 320
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 73, 69

Conread position: 1-493
Cow position:
Alignm length: 498
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 204

Conread position: 1-494
Cow position:
Alignm length: 501
Alignm identity: 320
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 165, 121

Conread position: 1-494
Cow position:
Alignm length: 500
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 204

Conread position: 1-494
Cow position:
Alignm length: 495
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 452, 102

Conread position: 1-494
Cow position:
Alignm length: 495
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 452, 102

Conread position: 1-494
Cow position:
Alignm length: 508
Alignm identity: 333
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 74, 58

Conread position: 1-494
Cow position:
Alignm length: 501
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 25

Conread position: 1-497
Cow position:
Alignm length: 509
Alignm identity: 321
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 156, 71

Conread position: 1-497
Cow position:
Alignm length: 505
Alignm identity: 325
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 343, 109

Conread position: 1-497
Cow position:
Alignm length: 502
Alignm identity: 321
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 359, 137

Conread position: 1-497
Cow position:
Alignm length: 499
Alignm identity: 314
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 192, 111

Conread position: 1-497
Cow position:
Alignm length: 499
Alignm identity: 318
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 35, 25

Conread position: 1-497
Cow position:
Alignm length: 500
Alignm identity: 313
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 299, 126

Conread position: 1-497
Cow position:
Alignm length: 505
Alignm identity: 318
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 35, 25

Conread position: 1-497
Cow position:
Alignm length: 510
Alignm identity: 323
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 57, 128

Conread position: 1-497
Cow position:
Alignm length: 511
Alignm identity: 332
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 134, 109

Conread position: 1-497
Cow position:
Alignm length: 499
Alignm identity: 313
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 25

Conread position: 1-497
Cow position:
Alignm length: 502
Alignm identity: 322
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 156, 121

Conread position: 1-497
Cow position:
Alignm length: 499
Alignm identity: 322
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 411, 97

Conread position: 1-497
Cow position:
Alignm length: 507
Alignm identity: 328
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 23, 174

Conread position: 1-497
Cow position:
Alignm length: 505
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 25

Conread position: 1-497
Cow position:
Alignm length: 514
Alignm identity: 333
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 94, 200

Conread position: 1-497
Cow position:
Alignm length: 518
Alignm identity: 327
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 79, 188

Conread position: 1-497
Cow position:
Alignm length: 502
Alignm identity: 326
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 32, 25

Conread position: 1-497
Cow position:
Alignm length: 505
Alignm identity: 321
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 156, 78

Conread position: 1-497
Cow position:
Alignm length: 500
Alignm identity: 324
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 156, 109

Conread position: 1-497
Cow position:
Alignm length: 500
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 109

Conread position: 1-497
Cow position:
Alignm length: 500
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 204

Conread position: 1-497
Cow position:
Alignm length: 503
Alignm identity: 325
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 351, 109

Conread position: 1-497
Cow position:
Alignm length: 502
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 74

Conread position: 1-497
Cow position:
Alignm length: 499
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 204

Conread position: 1-497
Cow position:
Alignm length: 504
Alignm identity: 321
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 84

Conread position: 1-497
Cow position:
Alignm length: 499
Alignm identity: 313
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 411, 245

Conread position: 1-497
Cow position:
Alignm length: 510
Alignm identity: 326
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 79, 83

Conread position: 1-497
Cow position:
Alignm length: 499
Alignm identity: 310
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 397, 109

Conread position: 1-497
Cow position:
Alignm length: 501
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 121

Conread position: 1-497
Cow position:
Alignm length: 501
Alignm identity: 318
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 202, 127

Conread position: 1-497
Cow position:
Alignm length: 500
Alignm identity: 323
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 411, 55

Conread position: 2-191
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 131, 0

Conread position: 2-370
Cow position:
Alignm length: 371
Alignm identity: 243
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 62, 44

Conread position: 2-377
Cow position:
Alignm length: 376
Alignm identity: 247
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 2-494
Cow position:
Alignm length: 496
Alignm identity: 309
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 411, 73

Conread position: 2-497
Cow position:
Alignm length: 503
Alignm identity: 325
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 341, 108

Conread position: 2-497
Cow position:
Alignm length: 501
Alignm identity: 317
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 83, 78

Conread position: 2-499
Cow position:
Alignm length: 501
Alignm identity: 324
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 383, 125

Conread position: 3-192
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 89, 147

Conread position: 3-205
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 155, 175

Conread position: 3-330
Cow position:
Alignm length: 340
Alignm identity: 237
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 118, 38

Conread position: 3-334
Cow position:
Alignm length: 332
Alignm identity: 216
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 119, 0

Conread position: 3-339
Cow position:
Alignm length: 338
Alignm identity: 229
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 197, 11

Conread position: 3-339
Cow position:
Alignm length: 341
Alignm identity: 225
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 49, 40

Conread position: 3-368
Cow position:
Alignm length: 371
Alignm identity: 242
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 89

Conread position: 3-378
Cow position:
Alignm length: 379
Alignm identity: 264
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 144, 11

Conread position: 3-414
Cow position:
Alignm length: 415
Alignm identity: 275
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 123, 71

Conread position: 3-482
Cow position:
Alignm length: 499
Alignm identity: 313
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 56

Conread position: 3-493
Cow position:
Alignm length: 500
Alignm identity: 326
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 134

Conread position: 3-497
Cow position:
Alignm length: 497
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 199

Conread position: 4-351
Cow position:
Alignm length: 351
Alignm identity: 238
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 152, 43

Conread position: 5-252
Cow position:
Alignm length: 249
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 85

Conread position: 6-394
Cow position:
Alignm length: 389
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 6-492
Cow position:
Alignm length: 492
Alignm identity: 306
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 212, 64

Conread position: 7-476
Cow position:
Alignm length: 471
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 41

Conread position: 8-394
Cow position:
Alignm length: 389
Alignm identity: 249
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 19

Conread position: 8-491
Cow position:
Alignm length: 489
Alignm identity: 310
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 202, 185

Conread position: 9-497
Cow position:
Alignm length: 497
Alignm identity: 319
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 24, 11

Conread position: 10-373
Cow position:
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 14

Conread position: 11-228
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 77

Conread position: 11-351
Cow position:
Alignm length: 351
Alignm identity: 230
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 5, 38

Conread position: 12-467
Cow position:
Alignm length: 460
Alignm identity: 291
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 24, 121

Conread position: 13-461
Cow position:
Alignm length: 450
Alignm identity: 286
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 400, 67

Conread position: 16-393
Cow position:
Alignm length: 381
Alignm identity: 260
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 63, 42

Conread position: 16-499
Cow position:
Alignm length: 492
Alignm identity: 313
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 20, 10

Conread position: 17-401
Cow position:
Alignm length: 387
Alignm identity: 256
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 174, 9

Conread position: 18-497
Cow position:
Alignm length: 483
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 175

Conread position: 19-496
Cow position:
Alignm length: 482
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 7

Conread position: 27-394
Cow position:
Alignm length: 370
Alignm identity: 246
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 187, 85

Conread position: 27-492
Cow position:
Alignm length: 468
Alignm identity: 301
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 377, 130

Conread position: 32-497
Cow position:
Alignm length: 469
Alignm identity: 298
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 366, 216

Conread position: 34-197
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 136, 0

Conread position: 36-499
Cow position:
Alignm length: 474
Alignm identity: 315
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 279, 23

Conread position: 41-491
Cow position:
Alignm length: 463
Alignm identity: 302
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 38, 68

Conread position: 43-476
Cow position:
Alignm length: 439
Alignm identity: 288
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 154, 166

Conread position: 50-499
Cow position:
Alignm length: 458
Alignm identity: 299
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 40, 187

Conread position: 58-384
Cow position:
Alignm length: 331
Alignm identity: 216
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 273, 59

Conread position: 59-351
Cow position:
Alignm length: 295
Alignm identity: 201
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 161, 79

Conread position: 78-312
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 5, 116

Conread position: 82-491
Cow position:
Alignm length: 416
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 77

Conread position: 88-494
Cow position:
Alignm length: 417
Alignm identity: 260
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 116, 14

Conread position: 93-499
Cow position:
Alignm length: 415
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 9

Conread position: 96-495
Cow position:
Alignm length: 411
Alignm identity: 256
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 100

Conread position: 103-499
Cow position:
Alignm length: 406
Alignm identity: 272
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 23, 129

Conread position: 104-499
Cow position:
Alignm length: 403
Alignm identity: 266
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 59, 130

Conread position: 105-491
Cow position:
Alignm length: 396
Alignm identity: 271
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 62, 27

Conread position: 105-491
Cow position:
Alignm length: 392
Alignm identity: 249
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 97

Conread position: 114-344
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 67, 12

Conread position: 133-394
Cow position:
Alignm length: 264
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 35

Conread position: 145-393
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 110

Conread position: 148-394
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 171-499
Cow position:
Alignm length: 332
Alignm identity: 227
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 219, 74

Conread position: 172-499
Cow position:
Alignm length: 333
Alignm identity: 226
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 18, 33

Conread position: 173-397
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 144, 42

Conread position: 191-493
Cow position:
Alignm length: 308
Alignm identity: 215
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 14

Show alignments to all cow chromosomes.