Cow genome map
| Conread name: | Pla1-C0000028_H02 |
| Conread position: | 1-173 |
| Cow position: | chrX:5854497-5854324 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1-240 |
| Cow position: | chrX:23418052-23417814 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 82 |
| Conread position: | 1-249 |
| Cow position: | chrX:7482598-7482846 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chrX:5864360-5864611 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-296 |
| Cow position: | chrX:8480617-8480918 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 1-298 |
| Cow position: | chrX:8610735-8610448 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 1-330 |
| Cow position: | chrX:15486802-15486492 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 25 |
| Conread position: | 1-332 |
| Cow position: | chrX:29885956-29886278 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-390 |
| Cow position: | chrX:23958015-23958394 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 104 |
| Conread position: | 1-394 |
| Cow position: | chrX:29286400-29286781 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 139, 111 |
| Conread position: | 1-394 |
| Cow position: | chrX:29910463-29910076 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 67, 74 |
| Conread position: | 1-397 |
| Cow position: | chrX:5356857-5356471 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 343, 109 |
| Conread position: | 1-410 |
| Cow position: | chrX:9971849-9972232 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 366, 25 |
| Conread position: | 1-450 |
| Cow position: | chrX:15308968-15308531 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 295 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 162, 13 |
| Conread position: | 1-451 |
| Cow position: | chrX:21059745-21060174 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 301 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 280, 145 |
| Conread position: | 1-452 |
| Cow position: | chrX:46235709-46236152 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 69 |
| Conread position: | 1-487 |
| Cow position: | chrX:3467680-3467203 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 310 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-490 |
| Cow position: | chrX:29949632-29949163 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 204 |
| Conread position: | 1-491 |
| Cow position: | chrX:10385268-10385748 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 322 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 1-491 |
| Cow position: | chrX:12480960-12481445 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 1-491 |
| Cow position: | chrX:16362156-16361671 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 311 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 111, 46 |
| Conread position: | 1-491 |
| Cow position: | chrX:19875482-19875954 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 1-491 |
| Cow position: | chrX:26766234-26765749 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 317 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 1-491 |
| Cow position: | chrX:27316242-27316727 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 320 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 73, 69 |
| Conread position: | 1-493 |
| Cow position: | chrX:17052509-17052994 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-494 |
| Cow position: | chrX:3374942-3374457 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 320 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 165, 121 |
| Conread position: | 1-494 |
| Cow position: | chrX:11148370-11147882 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-494 |
| Cow position: | chrX:13075730-13075251 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 452, 102 |
| Conread position: | 1-494 |
| Cow position: | chrX:13096293-13095812 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 452, 102 |
| Conread position: | 1-494 |
| Cow position: | chrX:19726031-19725544 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 333 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 1-494 |
| Cow position: | chrX:27083933-27084424 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 1-497 |
| Cow position: | chrX:321432-321920 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 321 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 1-497 |
| Cow position: | chrX:971746-972229 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 325 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 343, 109 |
| Conread position: | 1-497 |
| Cow position: | chrX:1547945-1548435 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 321 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 359, 137 |
| Conread position: | 1-497 |
| Cow position: | chrX:2577392-2577878 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 314 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 192, 111 |
| Conread position: | 1-497 |
| Cow position: | chrX:6872104-6871621 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 318 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 1-497 |
| Cow position: | chrX:9009305-9009794 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 313 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 299, 126 |
| Conread position: | 1-497 |
| Cow position: | chrX:12343902-12344396 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 318 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 1-497 |
| Cow position: | chrX:12668784-12668290 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 323 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 57, 128 |
| Conread position: | 1-497 |
| Cow position: | chrX:13412167-13411673 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 332 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 134, 109 |
| Conread position: | 1-497 |
| Cow position: | chrX:14460490-14460963 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 1-497 |
| Cow position: | chrX:15126260-15125775 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 322 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 156, 121 |
| Conread position: | 1-497 |
| Cow position: | chrX:18658828-18658353 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 322 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 411, 97 |
| Conread position: | 1-497 |
| Cow position: | chrX:18952716-18952223 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 328 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 23, 174 |
| Conread position: | 1-497 |
| Cow position: | chrX:21341358-21341857 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 1-497 |
| Cow position: | chrX:21491120-21491614 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 333 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 94, 200 |
| Conread position: | 1-497 |
| Cow position: | chrX:21580432-21580940 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 327 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 79, 188 |
| Conread position: | 1-497 |
| Cow position: | chrX:21643939-21643456 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 326 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 1-497 |
| Cow position: | chrX:23277990-23278478 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 321 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 156, 78 |
| Conread position: | 1-497 |
| Cow position: | chrX:23389552-23389080 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 324 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 156, 109 |
| Conread position: | 1-497 |
| Cow position: | chrX:23455051-23454564 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 109 |
| Conread position: | 1-497 |
| Cow position: | chrX:24771897-24771407 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-497 |
| Cow position: | chrX:26528941-26529419 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 325 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 351, 109 |
| Conread position: | 1-497 |
| Cow position: | chrX:27593020-27592535 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 74 |
| Conread position: | 1-497 |
| Cow position: | chrX:27619167-27618677 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 204 |
| Conread position: | 1-497 |
| Cow position: | chrX:29097162-29097651 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 79, 84 |
| Conread position: | 1-497 |
| Cow position: | chrX:29172796-29172311 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 411, 245 |
| Conread position: | 1-497 |
| Cow position: | chrX:30182973-30182473 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 326 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 79, 83 |
| Conread position: | 1-497 |
| Cow position: | chrX:30231131-30230650 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 310 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 397, 109 |
| Conread position: | 1-497 |
| Cow position: | chrX:32066201-32065713 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 121 |
| Conread position: | 1-497 |
| Cow position: | chrX:38148562-38149046 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 318 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 202, 127 |
| Conread position: | 1-497 |
| Cow position: | chrX:39562967-39562497 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 323 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 411, 55 |
| Conread position: | 2-191 |
| Cow position: | chrX:30730143-30729957 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 2-370 |
| Cow position: | chrX:20177534-20177180 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 44 |
| Conread position: | 2-377 |
| Cow position: | chrX:5308778-5308425 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 2-494 |
| Cow position: | chrX:30365816-30365354 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 411, 73 |
| Conread position: | 2-497 |
| Cow position: | chrX:21589960-21590435 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 325 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 341, 108 |
| Conread position: | 2-497 |
| Cow position: | chrX:31199530-31200011 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 317 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 83, 78 |
| Conread position: | 2-499 |
| Cow position: | chrX:28521628-28521148 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 324 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 383, 125 |
| Conread position: | 3-192 |
| Cow position: | chrX:6198159-6197974 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 89, 147 |
| Conread position: | 3-205 |
| Cow position: | chrX:13911381-13911585 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 155, 175 |
| Conread position: | 3-330 |
| Cow position: | chrX:24523716-24524047 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 3-334 |
| Cow position: | chrX:29793063-29792738 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 3-339 |
| Cow position: | chrX:12639004-12639312 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 197, 11 |
| Conread position: | 3-339 |
| Cow position: | chrX:24808637-24808302 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 3-368 |
| Cow position: | chrX:3621271-3621634 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 89 |
| Conread position: | 3-378 |
| Cow position: | chrX:15118103-15117747 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 264 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 144, 11 |
| Conread position: | 3-414 |
| Cow position: | chrX:17609354-17608953 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 123, 71 |
| Conread position: | 3-482 |
| Cow position: | chrX:3015355-3015838 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 56 |
| Conread position: | 3-493 |
| Cow position: | chrX:24230666-24230195 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 326 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 134 |
| Conread position: | 3-497 |
| Cow position: | chrX:674234-673752 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 199 |
| Conread position: | 4-351 |
| Cow position: | chrX:26578641-26578974 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 152, 43 |
| Conread position: | 5-252 |
| Cow position: | chrX:25430318-25430084 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 85 |
| Conread position: | 6-394 |
| Cow position: | chrX:27390229-27389850 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 6-492 |
| Cow position: | chrX:20695850-20695378 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 306 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 212, 64 |
| Conread position: | 7-476 |
| Cow position: | chrX:44752239-44751791 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 403, 41 |
| Conread position: | 8-394 |
| Cow position: | chrX:8962599-8962222 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 8-491 |
| Cow position: | chrX:15178463-15177985 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 310 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 202, 185 |
| Conread position: | 9-497 |
| Cow position: | chrX:27986848-27986376 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 319 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 10-373 |
| Cow position: | chrX:2766343-2766692 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 11-228 |
| Cow position: | chrX:27589766-27589557 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 77 |
| Conread position: | 11-351 |
| Cow position: | chrX:30273254-30273592 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 5, 38 |
| Conread position: | 12-467 |
| Cow position: | chrX:11492676-11493104 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 291 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 24, 121 |
| Conread position: | 13-461 |
| Cow position: | chrX:36136580-36136146 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 400, 67 |
| Conread position: | 16-393 |
| Cow position: | chrX:38236587-38236226 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 63, 42 |
| Conread position: | 16-499 |
| Cow position: | chrX:36237311-36237788 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 313 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 17-401 |
| Cow position: | chrX:36837071-36836705 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 174, 9 |
| Conread position: | 18-497 |
| Cow position: | chrX:20035419-20034946 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 175 |
| Conread position: | 19-496 |
| Cow position: | chrX:13913420-13913880 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 27-394 |
| Cow position: | chrX:23072163-23072512 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 187, 85 |
| Conread position: | 27-492 |
| Cow position: | chrX:7306713-7307152 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 301 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 377, 130 |
| Conread position: | 32-497 |
| Cow position: | chrX:16684840-16684381 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 298 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 366, 216 |
| Conread position: | 34-197 |
| Cow position: | chrX:27660872-27661032 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 36-499 |
| Cow position: | chrX:32330397-32330837 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 315 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 279, 23 |
| Conread position: | 41-491 |
| Cow position: | chrX:18841991-18841551 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 302 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 38, 68 |
| Conread position: | 43-476 |
| Cow position: | chrX:25464932-25465347 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 154, 166 |
| Conread position: | 50-499 |
| Cow position: | chrX:25613068-25613504 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 40, 187 |
| Conread position: | 58-384 |
| Cow position: | chrX:12294829-12295146 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 273, 59 |
| Conread position: | 59-351 |
| Cow position: | chrX:39763606-39763876 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 161, 79 |
| Conread position: | 78-312 |
| Cow position: | chrX:7549671-7549449 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 5, 116 |
| Conread position: | 82-491 |
| Cow position: | chrX:20927229-20927632 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 77 |
| Conread position: | 88-494 |
| Cow position: | chrX:22618159-22617753 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 116, 14 |
| Conread position: | 93-499 |
| Cow position: | chrX:23328742-23328347 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 9 |
| Conread position: | 96-495 |
| Cow position: | chrX:40021608-40021204 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 100 |
| Conread position: | 103-499 |
| Cow position: | chrX:17525652-17525271 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 129 |
| Conread position: | 104-499 |
| Cow position: | chrX:27716867-27717251 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 59, 130 |
| Conread position: | 105-491 |
| Cow position: | chrX:8938691-8938309 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 271 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 62, 27 |
| Conread position: | 105-491 |
| Cow position: | chrX:39694716-39695093 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 78, 97 |
| Conread position: | 114-344 |
| Cow position: | chrX:17068355-17068134 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 133-394 |
| Cow position: | chrX:25071384-25071130 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 145-393 |
| Cow position: | chrX:11740955-11740712 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 62, 110 |
| Conread position: | 148-394 |
| Cow position: | chrX:5854254-5854024 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 171-499 |
| Cow position: | chrX:30729157-30728859 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 219, 74 |
| Conread position: | 172-499 |
| Cow position: | chrX:24168910-24168598 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 173-397 |
| Cow position: | chrX:36179258-36179482 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 144, 42 |
| Conread position: | 191-493 |
| Cow position: | chrX:6198044-6197758 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 14 |
Show alignments to all cow chromosomes.