Cow genome map

Conread name: Pla1-C0000038_D23

Conread position: 1-269
Cow position: chr1:81180270-81179997 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 65, 49

Conread position: 1-270
Cow position: chr1:74822165-74822425 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 71, 30

Conread position: 1-278
Cow position: chr1:76851015-76850744 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 21, 52

Conread position: 1-296
Cow position: chr1:41056399-41056684 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 25

Conread position: 1-329
Cow position: chr1:99808013-99807685 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 51

Conread position: 1-348
Cow position: chr1:97422582-97422248 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 24

Conread position: 1-387
Cow position: chr1:90868723-90868347 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 269
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 69, 26

Conread position: 1-411
Cow position: chr1:10719775-10719362 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 32

Conread position: 1-412
Cow position: chr1:85652048-85651662 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 284
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 45, 29

Conread position: 1-414
Cow position: chr1:31190389-31189993 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 25

Conread position: 1-415
Cow position: chr1:80973908-80973487 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 123

Conread position: 1-450
Cow position: chr1:43352934-43352499 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 300
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 174, 25

Conread position: 1-460
Cow position: chr1:56228967-56229406 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 308
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 72, 15

Conread position: 1-473
Cow position: chr1:21934465-21933997 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 55

Conread position: 1-475
Cow position: chr1:25183838-25184299 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 26

Conread position: 1-475
Cow position: chr1:26688763-26688284 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 18

Conread position: 1-477
Cow position: chr1:21787038-21787533 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 1-477
Cow position: chr1:77132319-77132786 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 334
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 44

Conread position: 4-282
Cow position: chr1:92963108-92963383 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 70, 23

Conread position: 4-417
Cow position: chr1:13056812-13056409 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 23

Conread position: 4-445
Cow position: chr1:5162345-5161904 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 330

Conread position: 4-461
Cow position: chr1:37309790-37309357 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 314
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 192, 21

Conread position: 5-397
Cow position: chr1:15037044-15037429 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 48, 14

Conread position: 5-477
Cow position: chr1:35170056-35170517 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 21

Conread position: 10-476
Cow position: chr1:31871137-31871617 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 42

Conread position: 12-282
Cow position: chr1:61564513-61564783 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 60, 18

Conread position: 12-354
Cow position: chr1:7731446-7731787 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 38

Conread position: 12-476
Cow position: chr1:82378515-82378980 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 38

Conread position: 13-332
Cow position: chr1:79278716-79278412 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 198, 33

Conread position: 14-323
Cow position: chr1:56748309-56748626 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 111, 121

Conread position: 16-347
Cow position: chr1:28567718-28567382 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 57

Conread position: 18-270
Cow position: chr1:20521961-20521715 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 25, 107

Conread position: 19-303
Cow position: chr1:13455871-13456148 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 31

Conread position: 19-315
Cow position: chr1:16973114-16972821 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 31

Conread position: 19-317
Cow position: chr1:6165975-6166266 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 107

Conread position: 19-333
Cow position: chr1:45535426-45535742 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 48, 59

Conread position: 19-378
Cow position: chr1:59910074-59910438 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 80

Conread position: 19-396
Cow position: chr1:11323764-11323381 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 259
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 104, 32

Conread position: 19-477
Cow position: chr1:22777829-22777353 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 108

Conread position: 20-306
Cow position: chr1:56408342-56408627 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 30

Conread position: 20-414
Cow position: chr1:16572903-16572501 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 281
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 19, 178

Conread position: 21-325
Cow position: chr1:100761815-100762104 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 88

Conread position: 21-342
Cow position: chr1:32244669-32244351 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 29

Conread position: 21-344
Cow position: chr1:57264256-57263946 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 29

Conread position: 21-462
Cow position: chr1:70534204-70533763 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 29

Conread position: 21-463
Cow position: chr1:95765359-95764917 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 30

Conread position: 21-473
Cow position: chr1:71135877-71136336 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 104

Conread position: 21-474
Cow position: chr1:56643866-56643416 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 108

Conread position: 21-476
Cow position: chr1:61736827-61737285 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 53

Conread position: 22-462
Cow position: chr1:2765148-2765576 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 26

Conread position: 22-464
Cow position: chr1:23099628-23100078 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 31

Conread position: 22-480
Cow position: chr1:74947390-74946926 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 19

Conread position: 23-477
Cow position: chr1:77118798-77118344 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 79

Conread position: 25-468
Cow position: chr1:49131394-49130950 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 101

Conread position: 26-413
Cow position: chr1:11020770-11021135 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 24

Conread position: 27-282
Cow position: chr1:20422471-20422217 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 28-352
Cow position: chr1:57247167-57247493 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 99

Conread position: 28-412
Cow position: chr1:98594305-98594684 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 256
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 176, 18

Conread position: 29-282
Cow position: chr1:30882577-30882342 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 237, 21

Conread position: 29-302
Cow position: chr1:97620108-97619827 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 29-415
Cow position: chr1:94526232-94526618 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 21

Conread position: 29-475
Cow position: chr1:7657576-7657131 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 29-485
Cow position: chr1:54478060-54478534 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 22

Conread position: 30-268
Cow position: chr1:52506805-52506581 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 38, 20

Conread position: 30-271
Cow position: chr1:79590839-79591083 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 20

Conread position: 30-271
Cow position: chr1:85361594-85361836 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 21

Conread position: 30-282
Cow position: chr1:666099-666350 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 20

Conread position: 30-329
Cow position: chr1:60907100-60907408 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 20

Conread position: 30-329
Cow position: chr1:63391033-63390736 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 161, 20

Conread position: 30-329
Cow position: chr1:91817034-91816740 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 37, 7

Conread position: 30-332
Cow position: chr1:63435064-63434772 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 103, 20

Conread position: 30-449
Cow position: chr1:25383398-25383822 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 284
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 37, 21

Conread position: 30-473
Cow position: chr1:32341468-32341010 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 20

Conread position: 30-474
Cow position: chr1:77462103-77462545 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 291
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 189, 21

Conread position: 30-478
Cow position: chr1:41735886-41735439 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 31-245
Cow position: chr1:31414221-31414010 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 180, 18

Conread position: 31-259
Cow position: chr1:90864560-90864328 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 20

Conread position: 31-313
Cow position: chr1:82370491-82370759 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 19

Conread position: 31-415
Cow position: chr1:30413325-30413710 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 31-477
Cow position: chr1:30066379-30066811 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 313
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 288, 20

Conread position: 32-412
Cow position: chr1:73196503-73196110 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 268
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 19, 9

Conread position: 33-258
Cow position: chr1:20799610-20799849 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 94

Conread position: 33-282
Cow position: chr1:3456614-3456854 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 17

Conread position: 33-332
Cow position: chr1:61724283-61723985 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 17

Conread position: 33-412
Cow position: chr1:4441367-4441003 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 10

Conread position: 33-449
Cow position: chr1:24133313-24132910 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 274
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 160, 15

Conread position: 33-461
Cow position: chr1:80764793-80764361 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 17

Conread position: 34-406
Cow position: chr1:6795193-6794813 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 16

Conread position: 34-437
Cow position: chr1:29975860-29975456 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 91

Conread position: 35-275
Cow position: chr1:24558655-24558889 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 89, 15

Conread position: 37-273
Cow position: chr1:100421589-100421811 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 35, 13

Conread position: 37-327
Cow position: chr1:91800862-91800570 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 108, 38

Conread position: 38-269
Cow position: chr1:3776867-3776643 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 35, 12

Conread position: 39-332
Cow position: chr1:47008775-47009067 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 28, 12

Conread position: 39-388
Cow position: chr1:67994873-67995211 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 89

Conread position: 41-486
Cow position: chr1:42138615-42139057 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 293
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 117, 21

Conread position: 42-275
Cow position: chr1:61661559-61661315 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 11, 43

Conread position: 42-326
Cow position: chr1:1403724-1403453 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 43

Conread position: 43-474
Cow position: chr1:62732324-62732752 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 11

Conread position: 46-305
Cow position: chr1:4293815-4294064 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 159, 25

Conread position: 46-332
Cow position: chr1:44164829-44165120 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 80

Conread position: 47-478
Cow position: chr1:97622446-97622029 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 76

Conread position: 52-278
Cow position: chr1:71119268-71119499 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 81

Conread position: 52-283
Cow position: chr1:77657823-77658056 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 85, 74

Conread position: 52-296
Cow position: chr1:14528443-14528194 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 72

Conread position: 52-301
Cow position: chr1:51836328-51836577 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 72

Conread position: 52-308
Cow position: chr1:21954461-21954219 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 73

Conread position: 52-315
Cow position: chr1:84255511-84255784 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 19, 73

Conread position: 52-327
Cow position: chr1:81563490-81563774 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 49

Conread position: 52-328
Cow position: chr1:84239350-84239079 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 20, 73

Conread position: 52-333
Cow position: chr1:37707212-37706935 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 73

Conread position: 52-333
Cow position: chr1:75443660-75443395 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 72

Conread position: 52-338
Cow position: chr1:72803482-72803201 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 150

Conread position: 52-412
Cow position: chr1:93528447-93528820 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 74

Conread position: 52-417
Cow position: chr1:4239294-4239630 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 72

Conread position: 52-444
Cow position: chr1:81319047-81319443 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 105, 71

Conread position: 52-470
Cow position: chr1:71045512-71045937 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 72

Conread position: 52-474
Cow position: chr1:8919800-8919377 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 291
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 199, 71

Conread position: 52-474
Cow position: chr1:46839351-46839795 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 72

Conread position: 52-475
Cow position: chr1:63504096-63504521 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 48

Conread position: 52-475
Cow position: chr1:93110868-93110425 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 75

Conread position: 52-476
Cow position: chr1:33986760-33986333 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 71

Conread position: 52-476
Cow position: chr1:52415202-52414775 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 69

Conread position: 52-476
Cow position: chr1:95176692-95177126 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 291
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 17, 73

Conread position: 52-477
Cow position: chr1:10064221-10063795 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 74

Conread position: 52-477
Cow position: chr1:39418361-39417922 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 300
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 73

Conread position: 52-477
Cow position: chr1:78791550-78791118 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 73

Conread position: 52-478
Cow position: chr1:90423329-90422891 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 72

Conread position: 52-479
Cow position: chr1:59650023-59650462 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 64

Conread position: 52-488
Cow position: chr1:25793683-25793237 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 73

Conread position: 53-281
Cow position: chr1:41696815-41697046 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 94, 19

Conread position: 53-282
Cow position: chr1:19482316-19482097 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 73

Conread position: 53-405
Cow position: chr1:29648646-29648294 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 241
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 69

Conread position: 53-473
Cow position: chr1:7143091-7142675 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 71

Conread position: 53-475
Cow position: chr1:28678295-28678711 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 19

Conread position: 53-475
Cow position: chr1:51256794-51257202 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 42

Conread position: 54-415
Cow position: chr1:64189261-64189622 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 71

Conread position: 54-475
Cow position: chr1:35844171-35843734 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 58

Conread position: 55-250
Cow position: chr1:29671764-29671566 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 70

Conread position: 55-312
Cow position: chr1:11914117-11913865 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 137, 69

Conread position: 55-332
Cow position: chr1:52994784-52995058 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 92, 69

Conread position: 55-335
Cow position: chr1:71079193-71078923 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 22

Conread position: 55-344
Cow position: chr1:31235174-31234885 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 73

Conread position: 55-390
Cow position: chr1:9870096-9869761 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 71

Conread position: 55-485
Cow position: chr1:8869904-8869482 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 22

Conread position: 56-258
Cow position: chr1:70236532-70236324 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 59

Conread position: 57-476
Cow position: chr1:76096201-76096625 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 70

Conread position: 58-329
Cow position: chr1:4290919-4291197 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 9, 69

Conread position: 58-469
Cow position: chr1:85411342-85411752 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 66

Conread position: 60-280
Cow position: chr1:10655243-10655470 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 64, 220

Conread position: 60-312
Cow position: chr1:73522379-73522133 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 12, 133

Conread position: 60-401
Cow position: chr1:25886310-25885969 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 64

Conread position: 60-415
Cow position: chr1:29916179-29916533 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 47

Conread position: 62-449
Cow position: chr1:10942325-10941945 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 254
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 5, 55

Conread position: 62-449
Cow position: chr1:10964061-10964441 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 253
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 55

Conread position: 63-432
Cow position: chr1:15333650-15334031 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 260
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 12

Conread position: 63-470
Cow position: chr1:69415948-69415527 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 13

Conread position: 64-311
Cow position: chr1:7800378-7800630 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 59

Conread position: 64-477
Cow position: chr1:20099133-20099556 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 59

Conread position: 65-423
Cow position: chr1:92010084-92010441 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 58

Conread position: 66-304
Cow position: chr1:62919948-62920174 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 142, 44

Conread position: 66-315
Cow position: chr1:101812503-101812257 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 34

Conread position: 66-321
Cow position: chr1:55705482-55705223 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 66-329
Cow position: chr1:73761580-73761324 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 146, 58

Conread position: 66-332
Cow position: chr1:9444078-9443815 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 158

Conread position: 66-396
Cow position: chr1:56634870-56635201 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 141, 58

Conread position: 66-410
Cow position: chr1:54163038-54162688 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 89, 57

Conread position: 66-415
Cow position: chr1:78750921-78750578 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 38, 59

Conread position: 66-475
Cow position: chr1:65664835-65665240 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 285
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 80, 45

Conread position: 66-477
Cow position: chr1:27976381-27976782 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 57

Conread position: 69-272
Cow position: chr1:97785958-97786158 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 133, 54

Conread position: 70-293
Cow position: chr1:5061797-5062025 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 52

Conread position: 70-413
Cow position: chr1:15691113-15691451 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 53

Conread position: 70-477
Cow position: chr1:96472205-96472625 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 293
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 168

Conread position: 72-332
Cow position: chr1:34771726-34771469 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 87, 52

Conread position: 73-387
Cow position: chr1:26702429-26702113 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 211
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 100, 51

Conread position: 74-272
Cow position: chr1:7971210-7971393 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 75-283
Cow position: chr1:45673492-45673698 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 112, 33

Conread position: 76-269
Cow position: chr1:64939161-64938967 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 158
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 69, 47

Conread position: 76-448
Cow position: chr1:49433483-49433109 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 250
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 87

Conread position: 79-415
Cow position: chr1:84015656-84015992 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 54, 44

Conread position: 82-476
Cow position: chr1:74956236-74955824 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 271
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 42

Conread position: 85-265
Cow position: chr1:95654925-95654743 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 39

Conread position: 94-479
Cow position: chr1:4414408-4414019 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 257
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 111, 30

Conread position: 94-481
Cow position: chr1:58825348-58825731 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 29

Conread position: 99-346
Cow position: chr1:765768-765516 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 33, 24

Conread position: 99-352
Cow position: chr1:51654215-51654482 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 25

Conread position: 100-327
Cow position: chr1:96277249-96277023 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 8

Conread position: 101-437
Cow position: chr1:89443670-89443329 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 23

Conread position: 103-439
Cow position: chr1:69004201-69004543 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 105-478
Cow position: chr1:89548000-89548378 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 20

Conread position: 107-477
Cow position: chr1:20581761-20582131 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 16

Conread position: 113-414
Cow position: chr1:84235512-84235211 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 109, 7

Conread position: 120-365
Cow position: chr1:63363028-63362786 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 118, 11

Conread position: 121-476
Cow position: chr1:45638308-45638668 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 154

Conread position: 121-477
Cow position: chr1:5278592-5278229 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 130

Conread position: 121-485
Cow position: chr1:13195600-13195236 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 162

Conread position: 122-236
Cow position: chr1:102642703-102642824 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 122-328
Cow position: chr1:42398371-42398161 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 69, 144

Conread position: 122-329
Cow position: chr1:24445803-24445596 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 55

Conread position: 122-414
Cow position: chr1:8192904-8192615 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 31

Conread position: 123-475
Cow position: chr1:79115162-79115534 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 249
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 40

Conread position: 125-414
Cow position: chr1:50345371-50345666 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 99

Conread position: 126-476
Cow position: chr1:2997773-2998140 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 156

Conread position: 127-341
Cow position: chr1:20544127-20544344 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 75, 5

Conread position: 127-393
Cow position: chr1:57782840-57783104 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 89

Conread position: 132-332
Cow position: chr1:38525426-38525624 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 73

Conread position: 132-415
Cow position: chr1:75347456-75347746 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 140-352
Cow position: chr1:70026500-70026287 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 171

Conread position: 140-415
Cow position: chr1:52449764-52449500 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 137

Conread position: 140-478
Cow position: chr1:39025882-39026216 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 132, 54

Conread position: 141-415
Cow position: chr1:101771753-101772021 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 84, 22

Conread position: 142-477
Cow position: chr1:51904479-51904151 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 16

Conread position: 145-412
Cow position: chr1:63314677-63314949 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 77, 0

Conread position: 145-414
Cow position: chr1:67407343-67407083 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 87

Conread position: 145-476
Cow position: chr1:18414602-18414281 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 183, 15

Conread position: 145-477
Cow position: chr1:46205666-46205999 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 135

Conread position: 146-350
Cow position: chr1:7609464-7609676 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 15, 122

Conread position: 146-480
Cow position: chr1:96339602-96339927 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 18

Conread position: 147-333
Cow position: chr1:85596200-85596008 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 116

Conread position: 149-449
Cow position: chr1:91023615-91023313 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 195
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 113

Conread position: 150-382
Cow position: chr1:29657681-29657909 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 65, 35

Conread position: 150-443
Cow position: chr1:38692517-38692811 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 127

Conread position: 154-412
Cow position: chr1:6734322-6734570 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 71, 37

Conread position: 154-444
Cow position: chr1:50045657-50045958 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 128

Conread position: 155-477
Cow position: chr1:75998599-75998281 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 37

Conread position: 157-314
Cow position: chr1:25610615-25610458 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 62, 120

Conread position: 157-480
Cow position: chr1:39225064-39224727 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 65

Conread position: 158-463
Cow position: chr1:24407025-24406719 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 170, 27

Conread position: 159-414
Cow position: chr1:26531715-26531461 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 158, 11

Conread position: 160-359
Cow position: chr1:70389299-70389488 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 160-473
Cow position: chr1:72731902-72732222 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 59, 235

Conread position: 164-293
Cow position: chr1:22388072-22387946 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 55, 7

Conread position: 164-476
Cow position: chr1:101786642-101786336 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 11

Conread position: 165-478
Cow position: chr1:44746734-44747051 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 110

Conread position: 171-407
Cow position: chr1:63038116-63038358 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 134, 43

Conread position: 178-417
Cow position: chr1:96025361-96025595 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 97

Conread position: 179-434
Cow position: chr1:73653756-73653502 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 23, 38

Conread position: 180-395
Cow position: chr1:28944400-28944613 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 116

Conread position: 185-475
Cow position: chr1:50634371-50634072 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 186-413
Cow position: chr1:5229073-5228846 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 49

Conread position: 191-476
Cow position: chr1:4788429-4788723 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 76

Conread position: 194-329
Cow position: chr1:87148761-87148896 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 33

Conread position: 206-413
Cow position: chr1:48083638-48083847 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 123, 68

Conread position: 224-479
Cow position: chr1:45479658-45479397 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 193, 65

Conread position: 227-477
Cow position: chr1:5102548-5102304 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 190, 57

Conread position: 228-475
Cow position: chr1:54216949-54217204 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 97, 45

Conread position: 236-478
Cow position: chr1:39121898-39121657 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 183

Conread position: 244-470
Cow position: chr1:36614138-36613909 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 173, 33

Conread position: 244-473
Cow position: chr1:64218479-64218243 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 112, 32

Conread position: 258-477
Cow position: chr1:54289231-54289001 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 26

Conread position: 258-478
Cow position: chr1:97603671-97603448 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 98, 18

Conread position: 259-475
Cow position: chr1:70236298-70236080 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 118, 18

Conread position: 265-416
Cow position: chr1:76170173-76170324 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 270-480
Cow position: chr1:75193046-75192846 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 274-487
Cow position: chr1:75183770-75183551 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 143, 30

Conread position: 283-476
Cow position: chr1:71782677-71782481 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 24

Conread position: 285-477
Cow position: chr1:70416117-70416318 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 96

Conread position: 289-476
Cow position: chr1:53920582-53920776 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 76

Conread position: 289-477
Cow position: chr1:45310280-45310085 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 127, 0

Conread position: 292-475
Cow position: chr1:6130738-6130552 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 65

Conread position: 292-479
Cow position: chr1:9355112-9354929 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 304-473
Cow position: chr1:80897888-80897720 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 94, 34

Show alignments to all cow chromosomes.