• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Pla1-C0000038_D23
        

               
Conread position:
               
1-271
               

               
Cow position:
               
chr13:30651452-30651194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:18835463-18835199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr13:37516857-37517129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr13:6616471-6616787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr13:56686708-56686395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr13:6498870-6498494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr13:6945650-6945254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr13:37981475-37981872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr13:46284336-46284794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chr13:32167025-32167503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr13:9125950-9125474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr13:9803334-9802870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 30
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr13:32717594-32718063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
4-386
               

               
Cow position:
               
chr13:311706-311336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
4-449
               

               
Cow position:
               
chr13:17158590-17159043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
4-456
               

               
Cow position:
               
chr13:54969539-54969984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
5-309
               

               
Cow position:
               
chr13:1767042-1766756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr13:24238197-24238366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chr13:21176050-21176480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
12-409
               

               
Cow position:
               
chr13:18351111-18350711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 41
               

               
Conread position:
               
13-329
               

               
Cow position:
               
chr13:60330021-60329718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
14-271
               

               
Cow position:
               
chr13:52922357-52922107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
54, 37
               

               
Conread position:
               
18-329
               

               
Cow position:
               
chr13:58324664-58324354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
18-474
               

               
Cow position:
               
chr13:62169275-62169738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 32
               

               
Conread position:
               
20-475
               

               
Cow position:
               
chr13:33282280-33281808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
21-258
               

               
Cow position:
               
chr13:48251726-48251958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
51, 104
               

               
Conread position:
               
21-294
               

               
Cow position:
               
chr13:7262655-7262384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
21-323
               

               
Cow position:
               
chr13:24822504-24822799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr13:43594850-43595149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
101, 84
               

               
Conread position:
               
21-344
               

               
Cow position:
               
chr13:33631382-33631070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
21-388
               

               
Cow position:
               
chr13:4604557-4604186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
126, 52
               

               
Conread position:
               
21-413
               

               
Cow position:
               
chr13:24280514-24280128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 205
               

               
Conread position:
               
21-414
               

               
Cow position:
               
chr13:4664599-4664986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
151, 42
               

               
Conread position:
               
21-473
               

               
Cow position:
               
chr13:29631114-29630679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
21-477
               

               
Cow position:
               
chr13:9665337-9664865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
21-477
               

               
Cow position:
               
chr13:15945762-15945276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
21-478
               

               
Cow position:
               
chr13:6621332-6621791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 103
               

               
Conread position:
               
23-468
               

               
Cow position:
               
chr13:1959273-1958817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
25-281
               

               
Cow position:
               
chr13:25261547-25261804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
28-474
               

               
Cow position:
               
chr13:46501561-46501125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
29-258
               

               
Cow position:
               
chr13:60429825-60430047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
157, 21
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr13:14227187-14226909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
29-360
               

               
Cow position:
               
chr13:41253871-41253545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
176, 14
               

               
Conread position:
               
29-418
               

               
Cow position:
               
chr13:60650662-60651039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
30-247
               

               
Cow position:
               
chr13:38485083-38484870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
160, 20
               

               
Conread position:
               
30-271
               

               
Cow position:
               
chr13:33875915-33875681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
30-280
               

               
Cow position:
               
chr13:55295373-55295617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
180, 20
               

               
Conread position:
               
30-282
               

               
Cow position:
               
chr13:41807028-41806779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
30-282
               

               
Cow position:
               
chr13:54381682-54381935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
159, 18
               

               
Conread position:
               
30-313
               

               
Cow position:
               
chr13:5752170-5752452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
30-321
               

               
Cow position:
               
chr13:971645-971930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
30-321
               

               
Cow position:
               
chr13:25817766-25817494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
30-327
               

               
Cow position:
               
chr13:12682288-12682584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
30-329
               

               
Cow position:
               
chr13:17855627-17855332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
30-332
               

               
Cow position:
               
chr13:2414282-2413986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
165, 94
               

               
Conread position:
               
30-332
               

               
Cow position:
               
chr13:42114274-42113976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
30-415
               

               
Cow position:
               
chr13:38898000-38898370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
30-416
               

               
Cow position:
               
chr13:54080551-54080946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
30-432
               

               
Cow position:
               
chr13:20784841-20784443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
30-450
               

               
Cow position:
               
chr13:45353295-45352865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
159, 20
               

               
Conread position:
               
30-461
               

               
Cow position:
               
chr13:23265982-23265548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
30-481
               

               
Cow position:
               
chr13:25434876-25435326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
30-483
               

               
Cow position:
               
chr13:14717084-14717546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
31-332
               

               
Cow position:
               
chr13:19178528-19178229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
31-411
               

               
Cow position:
               
chr13:4208565-4208941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
31-418
               

               
Cow position:
               
chr13:16343942-16343560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
31-477
               

               
Cow position:
               
chr13:34995074-34995529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
31-482
               

               
Cow position:
               
chr13:17886753-17886312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
33-474
               

               
Cow position:
               
chr13:6759540-6759982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
33-477
               

               
Cow position:
               
chr13:12521534-12521978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
33-484
               

               
Cow position:
               
chr13:12233206-12233663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
34-254
               

               
Cow position:
               
chr13:17439324-17439529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
34-375
               

               
Cow position:
               
chr13:47863450-47863793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
35-242
               

               
Cow position:
               
chr13:11460877-11460669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
8, 38
               

               
Conread position:
               
37-439
               

               
Cow position:
               
chr13:14220720-14220335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
42-416
               

               
Cow position:
               
chr13:55843730-55843354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
43-474
               

               
Cow position:
               
chr13:32773607-32773167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
45-354
               

               
Cow position:
               
chr13:38691296-38691600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
5, 81
               

               
Conread position:
               
45-387
               

               
Cow position:
               
chr13:1846127-1845800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
47-477
               

               
Cow position:
               
chr13:11767800-11768244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
49-439
               

               
Cow position:
               
chr13:11834247-11834639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 48
               

               
Conread position:
               
52-269
               

               
Cow position:
               
chr13:15288691-15288906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
52-270
               

               
Cow position:
               
chr13:44323138-44322921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
52-282
               

               
Cow position:
               
chr13:21235450-21235682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
52-304
               

               
Cow position:
               
chr13:13501387-13501633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
52-310
               

               
Cow position:
               
chr13:14378221-14377954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 71
               

               
Conread position:
               
52-315
               

               
Cow position:
               
chr13:23586376-23586090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
52-321
               

               
Cow position:
               
chr13:24586282-24586011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
52-329
               

               
Cow position:
               
chr13:1042721-1043009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
52-329
               

               
Cow position:
               
chr13:24376725-24376453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
52-347
               

               
Cow position:
               
chr13:8607284-8607580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
52-352
               

               
Cow position:
               
chr13:15622042-15621743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
52-354
               

               
Cow position:
               
chr13:60487221-60487529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
52-396
               

               
Cow position:
               
chr13:15884779-15885134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
82, 71
               

               
Conread position:
               
52-412
               

               
Cow position:
               
chr13:38872737-38873072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
52-413
               

               
Cow position:
               
chr13:24539730-24539381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
52-414
               

               
Cow position:
               
chr13:3015933-3016303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
52-449
               

               
Cow position:
               
chr13:21276090-21275694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
52-461
               

               
Cow position:
               
chr13:49848152-49847743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 65
               

               
Conread position:
               
52-472
               

               
Cow position:
               
chr13:52251551-52251994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
20, 229
               

               
Conread position:
               
52-475
               

               
Cow position:
               
chr13:10932787-10932358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
52-475
               

               
Cow position:
               
chr13:30510296-30509868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
52-477
               

               
Cow position:
               
chr13:661400-661836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
52-477
               

               
Cow position:
               
chr13:16327874-16327475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
52-477
               

               
Cow position:
               
chr13:22886757-22887189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
52-485
               

               
Cow position:
               
chr13:20466060-20466495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 20
               

               
Conread position:
               
53-255
               

               
Cow position:
               
chr13:46298404-46298612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
53-327
               

               
Cow position:
               
chr13:43184638-43184913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
53-475
               

               
Cow position:
               
chr13:29814775-29814355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
54-266
               

               
Cow position:
               
chr13:46985246-46985036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
55-327
               

               
Cow position:
               
chr13:24369817-24369543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
55-352
               

               
Cow position:
               
chr13:47963969-47964248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
56-270
               

               
Cow position:
               
chr13:9884999-9884782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
56-276
               

               
Cow position:
               
chr13:21210093-21209869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
56-351
               

               
Cow position:
               
chr13:53536075-53536374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
56-415
               

               
Cow position:
               
chr13:32657575-32657931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
57-250
               

               
Cow position:
               
chr13:23444580-23444779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
58-387
               

               
Cow position:
               
chr13:20649754-20650090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
8, 67
               

               
Conread position:
               
59-249
               

               
Cow position:
               
chr13:12990075-12989880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
59-271
               

               
Cow position:
               
chr13:23816523-23816736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
60-299
               

               
Cow position:
               
chr13:548750-548495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 182
               

               
Conread position:
               
60-351
               

               
Cow position:
               
chr13:25531561-25531856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
60-416
               

               
Cow position:
               
chr13:35718907-35719269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
62-426
               

               
Cow position:
               
chr13:15192669-15193027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
66-278
               

               
Cow position:
               
chr13:562918-563135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 61
               

               
Conread position:
               
66-352
               

               
Cow position:
               
chr13:21039378-21039666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
66-412
               

               
Cow position:
               
chr13:35653873-35654218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
66-476
               

               
Cow position:
               
chr13:10845813-10845402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
127, 59
               

               
Conread position:
               
66-479
               

               
Cow position:
               
chr13:17745459-17745038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
205, 58
               

               
Conread position:
               
67-282
               

               
Cow position:
               
chr13:18172559-18172343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr13:17347026-17346626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
67-476
               

               
Cow position:
               
chr13:20839786-20839364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
70-478
               

               
Cow position:
               
chr13:8245116-8245532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 53
               

               
Conread position:
               
85-314
               

               
Cow position:
               
chr13:4423279-4423514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
86-266
               

               
Cow position:
               
chr13:2302638-2302821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
86-449
               

               
Cow position:
               
chr13:24230413-24230048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
89-414
               

               
Cow position:
               
chr13:13577833-13578164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
94-479
               

               
Cow position:
               
chr13:34761863-34761481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
99-470
               

               
Cow position:
               
chr13:21627697-21628073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
120, 26
               

               
Conread position:
               
103-315
               

               
Cow position:
               
chr13:62474616-62474825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
107-300
               

               
Cow position:
               
chr13:39699982-39699794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
114, 19
               

               
Conread position:
               
107-479
               

               
Cow position:
               
chr13:46430122-46430495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
109-375
               

               
Cow position:
               
chr13:56842716-56842980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
166, 14
               

               
Conread position:
               
121-477
               

               
Cow position:
               
chr13:56673796-56674165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 186
               

               
Conread position:
               
125-412
               

               
Cow position:
               
chr13:3796308-3796015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 170
               

               
Conread position:
               
126-283
               

               
Cow position:
               
chr13:20510198-20510350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 99
               

               
Conread position:
               
128-476
               

               
Cow position:
               
chr13:47188602-47188245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
136-375
               

               
Cow position:
               
chr13:54388869-54389112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
137-310
               

               
Cow position:
               
chr13:14085332-14085169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
137-475
               

               
Cow position:
               
chr13:37558430-37558085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
137-477
               

               
Cow position:
               
chr13:50739317-50738971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 136
               

               
Conread position:
               
141-449
               

               
Cow position:
               
chr13:26698350-26698658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
64, 154
               

               
Conread position:
               
141-477
               

               
Cow position:
               
chr13:20180564-20180216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 141
               

               
Conread position:
               
146-354
               

               
Cow position:
               
chr13:20057314-20057514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
146-477
               

               
Cow position:
               
chr13:33975559-33975233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 119
               

               
Conread position:
               
150-440
               

               
Cow position:
               
chr13:26508602-26508321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 69
               

               
Conread position:
               
151-478
               

               
Cow position:
               
chr13:49200765-49200440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
177, 21
               

               
Conread position:
               
154-476
               

               
Cow position:
               
chr13:12745805-12745474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
156-474
               

               
Cow position:
               
chr13:40464349-40464033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 106
               

               
Conread position:
               
157-338
               

               
Cow position:
               
chr13:34191311-34191491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr13:57325971-57326198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
158-477
               

               
Cow position:
               
chr13:2803598-2803269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
158-477
               

               
Cow position:
               
chr13:33160862-33161194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
24, 131
               

               
Conread position:
               
161-449
               

               
Cow position:
               
chr13:18995256-18994961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
162-478
               

               
Cow position:
               
chr13:21563868-21563527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
163-415
               

               
Cow position:
               
chr13:16952573-16952340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 96
               

               
Conread position:
               
174-477
               

               
Cow position:
               
chr13:22075787-22075471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 103
               

               
Conread position:
               
177-388
               

               
Cow position:
               
chr13:13446053-13446259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
179-477
               

               
Cow position:
               
chr13:43166923-43167231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 100
               

               
Conread position:
               
181-477
               

               
Cow position:
               
chr13:9082907-9083198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
154, 16
               

               
Conread position:
               
194-472
               

               
Cow position:
               
chr13:18551086-18550810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr13:54695824-54696095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 104
               

               
Conread position:
               
199-465
               

               
Cow position:
               
chr13:52748710-52748981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
212, 29
               

               
Conread position:
               
201-415
               

               
Cow position:
               
chr13:33954944-33955156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
206-479
               

               
Cow position:
               
chr13:26522870-26523139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
207-415
               

               
Cow position:
               
chr13:54471091-54470886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
218-401
               

               
Cow position:
               
chr13:6894104-6893921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
219-476
               

               
Cow position:
               
chr13:34665196-34664932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 5
               

               
Conread position:
               
226-484
               

               
Cow position:
               
chr13:15090848-15091114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
103, 139
               

               
Conread position:
               
228-476
               

               
Cow position:
               
chr13:18761674-18761927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
184, 125
               

               
Conread position:
               
236-380
               

               
Cow position:
               
chr13:52966923-52966779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 126
               

               
Conread position:
               
236-461
               

               
Cow position:
               
chr13:58348128-58347902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
177, 16
               

               
Conread position:
               
236-477
               

               
Cow position:
               
chr13:30271374-30271124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
243-479
               

               
Cow position:
               
chr13:33347169-33346937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
178, 5
               

               
Conread position:
               
275-470
               

               
Cow position:
               
chr13:32904792-32904587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
277-490
               

               
Cow position:
               
chr13:54814902-54815126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
286-476
               

               
Cow position:
               
chr13:8822865-8822671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
287-475
               

               
Cow position:
               
chr13:20156483-20156289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 32
               

               
Conread position:
               
299-475
               

               
Cow position:
               
chr13:11463367-11463548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
118, 78
               

               
Conread position:
               
299-477
               

               
Cow position:
               
chr13:17991644-17991459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
300-439
               

               
Cow position:
               
chr13:22082374-22082228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 0
               
Show alignments to all cow chromosomes.