Cow genome map

Conread name: Pla1-C0000038_D23

Conread position: 1-261
Cow position: chr16:9846004-9845747 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 66, 31

Conread position: 1-266
Cow position: chr16:28816401-28816129 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-271
Cow position: chr16:23482996-23483262 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 25

Conread position: 1-274
Cow position: chr16:56832032-56831762 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 72, 25

Conread position: 1-301
Cow position: chr16:7639701-7639991 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 71, 25

Conread position: 1-327
Cow position: chr16:4857386-4857075 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 66, 26

Conread position: 1-329
Cow position: chr16:42970223-42969900 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 66, 25

Conread position: 1-332
Cow position: chr16:35187962-35188282 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 187, 20

Conread position: 1-370
Cow position: chr16:17605997-17606369 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 35, 73

Conread position: 1-375
Cow position: chr16:41752874-41752500 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 66, 124

Conread position: 1-449
Cow position: chr16:33645722-33646163 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 300
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 69, 22

Conread position: 1-477
Cow position: chr16:34210705-34210224 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 25

Conread position: 1-479
Cow position: chr16:53267435-53267910 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 32

Conread position: 4-352
Cow position: chr16:46223260-46222918 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 22, 40

Conread position: 4-474
Cow position: chr16:23066379-23066837 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 21

Conread position: 12-473
Cow position: chr16:44096-44545 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 36

Conread position: 13-336
Cow position: chr16:27004914-27005236 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 38

Conread position: 16-413
Cow position: chr16:20634152-20633761 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 32

Conread position: 18-477
Cow position: chr16:18426905-18427365 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 32

Conread position: 19-315
Cow position: chr16:5363610-5363912 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 30

Conread position: 19-416
Cow position: chr16:48385680-48385285 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 31

Conread position: 19-444
Cow position: chr16:4499156-4499576 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 55

Conread position: 19-474
Cow position: chr16:16545790-16546250 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 33

Conread position: 19-477
Cow position: chr16:44899010-44898576 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 307
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 402, 31

Conread position: 20-444
Cow position: chr16:55586883-55586458 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 105

Conread position: 21-315
Cow position: chr16:53613022-53613322 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 112, 29

Conread position: 21-378
Cow position: chr16:36911308-36910966 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 27

Conread position: 21-403
Cow position: chr16:4979535-4979907 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 51

Conread position: 21-410
Cow position: chr16:30572888-30572503 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 268
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 51, 33

Conread position: 21-414
Cow position: chr16:13181459-13181854 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 90

Conread position: 21-415
Cow position: chr16:50014253-50014637 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 34

Conread position: 21-448
Cow position: chr16:23681095-23681508 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 284
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 51, 29

Conread position: 21-468
Cow position: chr16:3628535-3628971 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 67

Conread position: 22-315
Cow position: chr16:15656084-15656359 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 26-344
Cow position: chr16:11643085-11643395 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 25

Conread position: 26-379
Cow position: chr16:4987677-4988006 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 242, 13

Conread position: 27-270
Cow position: chr16:30209492-30209725 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 171, 23

Conread position: 27-375
Cow position: chr16:16402604-16402250 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 253

Conread position: 29-325
Cow position: chr16:25170122-25170415 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 130, 22

Conread position: 29-366
Cow position: chr16:23673896-23674217 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 124, 24

Conread position: 30-229
Cow position: chr16:5293395-5293588 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 117, 20

Conread position: 30-268
Cow position: chr16:30939466-30939702 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 166, 20

Conread position: 30-281
Cow position: chr16:23730204-23729945 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 117, 20

Conread position: 30-281
Cow position: chr16:31558624-31558873 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 37, 23

Conread position: 30-282
Cow position: chr16:16177548-16177797 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 175, 23

Conread position: 30-332
Cow position: chr16:7542023-7542315 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 158, 21

Conread position: 30-415
Cow position: chr16:51880274-51879887 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 282
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 42, 20

Conread position: 30-442
Cow position: chr16:28267278-28266882 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 20

Conread position: 30-469
Cow position: chr16:8704029-8704433 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 20

Conread position: 31-295
Cow position: chr16:5243696-5243963 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 19

Conread position: 31-412
Cow position: chr16:28112183-28111827 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 19

Conread position: 32-247
Cow position: chr16:35937070-35937284 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 18

Conread position: 33-283
Cow position: chr16:50417953-50417703 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 18

Conread position: 33-412
Cow position: chr16:8933690-8933314 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 263
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 10, 84

Conread position: 34-271
Cow position: chr16:18051826-18052067 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 90, 17

Conread position: 34-302
Cow position: chr16:4762867-4763133 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 18, 93

Conread position: 34-444
Cow position: chr16:3614484-3614890 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 276
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 17

Conread position: 34-470
Cow position: chr16:27013636-27014079 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 16

Conread position: 34-473
Cow position: chr16:16265363-16264917 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 306
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 38, 14

Conread position: 38-386
Cow position: chr16:5416013-5415673 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 12

Conread position: 41-413
Cow position: chr16:13195595-13195226 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 85

Conread position: 41-460
Cow position: chr16:36930581-36930150 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 83

Conread position: 42-283
Cow position: chr16:18496429-18496181 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 227

Conread position: 42-420
Cow position: chr16:4699230-4698866 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 260
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 83

Conread position: 42-477
Cow position: chr16:10857885-10857438 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 31

Conread position: 45-477
Cow position: chr16:52577202-52577643 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 156

Conread position: 46-329
Cow position: chr16:21904910-21905188 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 24, 35

Conread position: 46-412
Cow position: chr16:18402439-18402800 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 262
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 7, 81

Conread position: 50-415
Cow position: chr16:49579826-49580188 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 223

Conread position: 52-225
Cow position: chr16:11449519-11449689 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 20, 73

Conread position: 52-244
Cow position: chr16:9728954-9729144 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 15, 73

Conread position: 52-262
Cow position: chr16:3288783-3288981 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 52-272
Cow position: chr16:16424854-16424629 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 73

Conread position: 52-272
Cow position: chr16:53553967-53553743 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 19, 73

Conread position: 52-282
Cow position: chr16:39385151-39385389 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 15, 73

Conread position: 52-283
Cow position: chr16:3918279-3918514 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 83

Conread position: 52-304
Cow position: chr16:25287940-25287690 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 71

Conread position: 52-327
Cow position: chr16:24147905-24148185 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 83

Conread position: 52-327
Cow position: chr16:48340942-48340670 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 17, 75

Conread position: 52-329
Cow position: chr16:238011-238294 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 76

Conread position: 52-332
Cow position: chr16:23990737-23990450 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 69

Conread position: 52-333
Cow position: chr16:46253939-46253656 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 48

Conread position: 52-352
Cow position: chr16:9932906-9933211 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 19, 77

Conread position: 52-352
Cow position: chr16:48494806-48494501 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 15, 72

Conread position: 52-352
Cow position: chr16:54564799-54564508 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 20, 47

Conread position: 52-386
Cow position: chr16:13611695-13611366 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 159, 20

Conread position: 52-390
Cow position: chr16:47728773-47729117 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 46

Conread position: 52-396
Cow position: chr16:11153438-11153094 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 44

Conread position: 52-412
Cow position: chr16:20685682-20685346 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 62

Conread position: 52-413
Cow position: chr16:42339952-42340311 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 25, 76

Conread position: 52-414
Cow position: chr16:5256753-5257112 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 245
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 20, 42

Conread position: 52-415
Cow position: chr16:2308434-2308799 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 52-415
Cow position: chr16:12169941-12169588 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 72

Conread position: 52-415
Cow position: chr16:42257205-42257564 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 20

Conread position: 52-416
Cow position: chr16:20025194-20025559 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 252
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 86

Conread position: 52-449
Cow position: chr16:4910781-4910374 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 275
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 15, 73

Conread position: 52-475
Cow position: chr16:19976715-19977138 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 76

Conread position: 52-477
Cow position: chr16:13660473-13660049 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 290
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 61

Conread position: 52-477
Cow position: chr16:56445652-56445237 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 72

Conread position: 52-480
Cow position: chr16:18557516-18557073 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 74

Conread position: 53-352
Cow position: chr16:8280038-8279739 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 72

Conread position: 53-395
Cow position: chr16:37924415-37924081 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 21

Conread position: 54-475
Cow position: chr16:47368535-47368933 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 47

Conread position: 55-396
Cow position: chr16:23737937-23738279 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 69

Conread position: 55-477
Cow position: chr16:31419198-31419636 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 68

Conread position: 56-324
Cow position: chr16:50113724-50113985 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 38

Conread position: 56-470
Cow position: chr16:51070175-51069737 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 80

Conread position: 56-470
Cow position: chr16:54515481-54515897 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 69

Conread position: 56-479
Cow position: chr16:37452862-37452433 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 288
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 40

Conread position: 58-443
Cow position: chr16:32837789-32837397 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 66

Conread position: 59-279
Cow position: chr16:55042807-55042578 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 21

Conread position: 60-283
Cow position: chr16:25043484-25043702 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 9, 58

Conread position: 60-304
Cow position: chr16:11568351-11568117 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 128, 21

Conread position: 60-332
Cow position: chr16:4372737-4372464 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 83, 94

Conread position: 60-386
Cow position: chr16:40333567-40333238 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 224
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 65

Conread position: 65-332
Cow position: chr16:53048315-53048581 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 70

Conread position: 65-352
Cow position: chr16:32781126-32781416 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 59

Conread position: 65-360
Cow position: chr16:10040074-10039783 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 144, 59

Conread position: 65-464
Cow position: chr16:10148045-10148458 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 270
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 144, 59

Conread position: 66-232
Cow position: chr16:49171645-49171480 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 152, 57

Conread position: 66-279
Cow position: chr16:8812322-8812104 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 33

Conread position: 66-305
Cow position: chr16:4875763-4875995 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 58

Conread position: 66-396
Cow position: chr16:41608373-41608705 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 66

Conread position: 67-474
Cow position: chr16:19003305-19002909 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 56

Conread position: 69-329
Cow position: chr16:13973514-13973260 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 42

Conread position: 73-277
Cow position: chr16:18758072-18757862 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 51

Conread position: 73-385
Cow position: chr16:50288929-50289239 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 93, 51

Conread position: 79-464
Cow position: chr16:26156357-26155970 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 44

Conread position: 81-387
Cow position: chr16:8323206-8322893 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 43, 54

Conread position: 82-315
Cow position: chr16:25463554-25463789 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 102, 44

Conread position: 84-281
Cow position: chr16:45677069-45676870 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 126, 40

Conread position: 99-346
Cow position: chr16:7784937-7785179 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 58, 25

Conread position: 101-305
Cow position: chr16:39237743-39237948 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 176

Conread position: 101-386
Cow position: chr16:52275330-52275041 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 109, 23

Conread position: 101-476
Cow position: chr16:11085579-11085197 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 268
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 22

Conread position: 102-457
Cow position: chr16:14685588-14685232 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 246
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 22

Conread position: 103-450
Cow position: chr16:44723217-44722877 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 34, 20

Conread position: 104-442
Cow position: chr16:10303949-10303600 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 31

Conread position: 106-413
Cow position: chr16:40732023-40732317 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 111, 17

Conread position: 120-461
Cow position: chr16:8236501-8236171 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 234, 100

Conread position: 121-273
Cow position: chr16:56905725-56905571 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 94

Conread position: 121-300
Cow position: chr16:25803587-25803404 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 32, 158

Conread position: 122-366
Cow position: chr16:43815732-43815985 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 98

Conread position: 122-473
Cow position: chr16:45692960-45693324 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 249

Conread position: 125-281
Cow position: chr16:53037801-53037644 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 80, 137

Conread position: 125-327
Cow position: chr16:5836404-5836603 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 84

Conread position: 127-451
Cow position: chr16:7549792-7550117 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 212
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 148

Conread position: 131-432
Cow position: chr16:42734185-42733880 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 74, 53

Conread position: 132-320
Cow position: chr16:43765138-43765320 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 132-325
Cow position: chr16:10592264-10592455 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 134

Conread position: 132-477
Cow position: chr16:16524529-16524185 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 17, 207

Conread position: 132-477
Cow position: chr16:38620791-38621140 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 59

Conread position: 133-412
Cow position: chr16:52683227-52683499 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 134

Conread position: 140-303
Cow position: chr16:9136013-9136181 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 86

Conread position: 140-364
Cow position: chr16:25386818-25387038 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 127, 73

Conread position: 141-333
Cow position: chr16:13792818-13792628 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 135, 18

Conread position: 141-482
Cow position: chr16:8674033-8674368 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 221
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 92, 64

Conread position: 145-443
Cow position: chr16:22872525-22872229 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 119, 49

Conread position: 146-470
Cow position: chr16:41689540-41689869 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 217
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 12

Conread position: 149-461
Cow position: chr16:689557-689872 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 182, 52

Conread position: 153-412
Cow position: chr16:52222478-52222216 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 155-477
Cow position: chr16:228633-228312 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 46, 54

Conread position: 158-477
Cow position: chr16:26134513-26134188 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 61, 77

Conread position: 170-477
Cow position: chr16:5020194-5019896 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 46, 22

Conread position: 171-459
Cow position: chr16:12072508-12072802 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 51, 106

Conread position: 174-477
Cow position: chr16:46680702-46680997 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 160

Conread position: 177-477
Cow position: chr16:37719031-37719339 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 63

Conread position: 179-354
Cow position: chr16:5789871-5789694 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 116

Conread position: 181-477
Cow position: chr16:16946659-16946347 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 29

Conread position: 184-323
Cow position: chr16:28829962-28829824 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 102

Conread position: 189-470
Cow position: chr16:2619081-2618809 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 176, 41

Conread position: 190-462
Cow position: chr16:42312275-42312554 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 140, 88

Conread position: 190-480
Cow position: chr16:44581183-44580890 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 144, 40

Conread position: 192-477
Cow position: chr16:1440328-1440612 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 15, 26

Conread position: 198-472
Cow position: chr16:54226699-54226415 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 136, 22

Conread position: 200-333
Cow position: chr16:13027573-13027703 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 23

Conread position: 218-414
Cow position: chr16:41711599-41711787 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 51

Conread position: 224-339
Cow position: chr16:4709100-4708986 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 231-477
Cow position: chr16:11661965-11662218 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 0

Conread position: 233-461
Cow position: chr16:43082302-43082072 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 156

Conread position: 237-479
Cow position: chr16:28454354-28454113 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 194, 0

Conread position: 247-415
Cow position: chr16:56104967-56104798 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 82, 146

Conread position: 298-476
Cow position: chr16:31490315-31490499 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 119, 89

Conread position: 327-477
Cow position: chr16:10611596-10611448 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 97, 91

Show alignments to all cow chromosomes.