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Cow genome map

           
Conread name:
           
Pla1-C0000038_D23
        

               
Conread position:
               
1-270
               

               
Cow position:
               
chr17:1295822-1295559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr17:5041929-5041670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr17:18109341-18109073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr17:25900948-25901219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
146, 21
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr17:12059347-12059024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr17:28539776-28540099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr17:32989242-32989569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
294, 25
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr17:32993864-32993531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
328, 25
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr17:21959930-21959559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
188, 20
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr17:30204404-30204790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr17:8926479-8926060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr17:9748519-9748935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr17:144424-143957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr17:19891364-19891851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
2-477
               

               
Cow position:
               
chr17:30539503-30539055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr17:9117395-9117652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
4-305
               

               
Cow position:
               
chr17:5896160-5895868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
146, 21
               

               
Conread position:
               
4-386
               

               
Cow position:
               
chr17:11304786-11305158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr17:23205780-23206170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
7-477
               

               
Cow position:
               
chr17:23803221-23803680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
10-239
               

               
Cow position:
               
chr17:1359048-1358822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
195, 78
               

               
Conread position:
               
10-301
               

               
Cow position:
               
chr17:8861431-8861142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
7, 43
               

               
Conread position:
               
13-416
               

               
Cow position:
               
chr17:13672320-13671927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
18-332
               

               
Cow position:
               
chr17:13922235-13922552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
19-259
               

               
Cow position:
               
chr17:9697945-9697699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
19-278
               

               
Cow position:
               
chr17:8214685-8214934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
19-354
               

               
Cow position:
               
chr17:16307141-16307464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
19-413
               

               
Cow position:
               
chr17:9746283-9746667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 31
               

               
Conread position:
               
19-470
               

               
Cow position:
               
chr17:8279950-8279497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
19-475
               

               
Cow position:
               
chr17:20215934-20216390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 31
               

               
Conread position:
               
21-321
               

               
Cow position:
               
chr17:24587382-24587682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
21-327
               

               
Cow position:
               
chr17:20157381-20157671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
274, 30
               

               
Conread position:
               
21-332
               

               
Cow position:
               
chr17:24761459-24761159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
189, 29
               

               
Conread position:
               
21-388
               

               
Cow position:
               
chr17:19236962-19237320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
21-396
               

               
Cow position:
               
chr17:20209045-20208689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
314, 29
               

               
Conread position:
               
21-413
               

               
Cow position:
               
chr17:8690676-8690298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
21-415
               

               
Cow position:
               
chr17:17452838-17452468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
21-439
               

               
Cow position:
               
chr17:28359613-28360022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 51
               

               
Conread position:
               
21-449
               

               
Cow position:
               
chr17:36790912-36791315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
179, 29
               

               
Conread position:
               
23-354
               

               
Cow position:
               
chr17:38276458-38276773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 27
               

               
Conread position:
               
25-415
               

               
Cow position:
               
chr17:25707725-25708112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
28-477
               

               
Cow position:
               
chr17:3042250-3042702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
29-329
               

               
Cow position:
               
chr17:38614728-38615026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
164, 22
               

               
Conread position:
               
29-366
               

               
Cow position:
               
chr17:25145538-25145221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
28, 24
               

               
Conread position:
               
29-396
               

               
Cow position:
               
chr17:27697920-27697565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 22
               

               
Conread position:
               
29-443
               

               
Cow position:
               
chr17:17410066-17410478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
29-477
               

               
Cow position:
               
chr17:27819068-27819516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
30-219
               

               
Cow position:
               
chr17:16463341-16463151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
30-329
               

               
Cow position:
               
chr17:23880055-23879755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
30-332
               

               
Cow position:
               
chr17:30665047-30665341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
165, 20
               

               
Conread position:
               
30-352
               

               
Cow position:
               
chr17:18860946-18860628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
30-415
               

               
Cow position:
               
chr17:26084808-26085178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 23
               

               
Conread position:
               
30-450
               

               
Cow position:
               
chr17:25189053-25189479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
30-457
               

               
Cow position:
               
chr17:39012491-39012923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
30-478
               

               
Cow position:
               
chr17:32457807-32457345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
30-493
               

               
Cow position:
               
chr17:33999271-33998820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
31-283
               

               
Cow position:
               
chr17:2079535-2079784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
32-332
               

               
Cow position:
               
chr17:27047938-27048225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
32-342
               

               
Cow position:
               
chr17:7047757-7047475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
32-396
               

               
Cow position:
               
chr17:20993265-20992904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
32-479
               

               
Cow position:
               
chr17:1783831-1783379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
108, 18
               

               
Conread position:
               
33-240
               

               
Cow position:
               
chr17:3683881-3683678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
34-386
               

               
Cow position:
               
chr17:11216110-11215766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
34-416
               

               
Cow position:
               
chr17:10308235-10307876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
34-476
               

               
Cow position:
               
chr17:8832330-8831919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
35-262
               

               
Cow position:
               
chr17:8230395-8230624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
36-477
               

               
Cow position:
               
chr17:33386210-33386646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
41-269
               

               
Cow position:
               
chr17:19455523-19455302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
42-449
               

               
Cow position:
               
chr17:32027682-32027259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
43-414
               

               
Cow position:
               
chr17:41892287-41891906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
50-262
               

               
Cow position:
               
chr17:10446705-10446921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
52-250
               

               
Cow position:
               
chr17:20835384-20835587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
52-263
               

               
Cow position:
               
chr17:21419223-21419440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
52-270
               

               
Cow position:
               
chr17:7890388-7890162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
52-278
               

               
Cow position:
               
chr17:16895503-16895287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
52-279
               

               
Cow position:
               
chr17:1061271-1061041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
52-280
               

               
Cow position:
               
chr17:25097254-25097486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
134, 80
               

               
Conread position:
               
52-282
               

               
Cow position:
               
chr17:27780646-27780875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
168, 71
               

               
Conread position:
               
52-303
               

               
Cow position:
               
chr17:25542021-25541777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
52-304
               

               
Cow position:
               
chr17:25755575-25755838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr17:26230731-26230996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
52-310
               

               
Cow position:
               
chr17:9293539-9293802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
52-312
               

               
Cow position:
               
chr17:18494724-18494469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
52-322
               

               
Cow position:
               
chr17:32472000-32471722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
52-325
               

               
Cow position:
               
chr17:27765072-27765336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr17:36331175-36330893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr17:36533165-36533437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
52-329
               

               
Cow position:
               
chr17:11102003-11101737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
52-333
               

               
Cow position:
               
chr17:3781835-3782117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
52-334
               

               
Cow position:
               
chr17:3139641-3139912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
52-352
               

               
Cow position:
               
chr17:2034336-2034622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
52-394
               

               
Cow position:
               
chr17:11171587-11171928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 72
               

               
Conread position:
               
52-412
               

               
Cow position:
               
chr17:11281316-11280946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
18, 47
               

               
Conread position:
               
52-412
               

               
Cow position:
               
chr17:25181358-25180997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
52-413
               

               
Cow position:
               
chr17:20780303-20780668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
52-414
               

               
Cow position:
               
chr17:21755650-21755278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
52-415
               

               
Cow position:
               
chr17:25740741-25741102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
52-449
               

               
Cow position:
               
chr17:11618371-11618775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
52-476
               

               
Cow position:
               
chr17:37415109-37414679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
52-477
               

               
Cow position:
               
chr17:18174013-18173606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 71
               

               
Conread position:
               
52-481
               

               
Cow position:
               
chr17:24580508-24580067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 83
               

               
Conread position:
               
53-266
               

               
Cow position:
               
chr17:21017586-21017803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
53-298
               

               
Cow position:
               
chr17:34628689-34628442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
54-476
               

               
Cow position:
               
chr17:27429371-27429799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
55-249
               

               
Cow position:
               
chr17:10220275-10220465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
90, 68
               

               
Conread position:
               
55-279
               

               
Cow position:
               
chr17:15363766-15363542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
161, 5
               

               
Conread position:
               
55-336
               

               
Cow position:
               
chr17:42435836-42435569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
55-478
               

               
Cow position:
               
chr17:10423862-10424283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
56-283
               

               
Cow position:
               
chr17:5997300-5997076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
56-313
               

               
Cow position:
               
chr17:40892947-40893201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
118, 14
               

               
Conread position:
               
57-301
               

               
Cow position:
               
chr17:4473007-4472777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
57-416
               

               
Cow position:
               
chr17:34864366-34864725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
60-271
               

               
Cow position:
               
chr17:31481247-31481025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
12, 202
               

               
Conread position:
               
63-474
               

               
Cow position:
               
chr17:36217380-36216965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
64-412
               

               
Cow position:
               
chr17:9911566-9911911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
7, 63
               

               
Conread position:
               
65-270
               

               
Cow position:
               
chr17:24490326-24490538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 70
               

               
Conread position:
               
65-329
               

               
Cow position:
               
chr17:1256699-1256434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
66-313
               

               
Cow position:
               
chr17:32950078-32950325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
66-352
               

               
Cow position:
               
chr17:25999922-26000210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
66-375
               

               
Cow position:
               
chr17:18824596-18824903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 58
               

               
Conread position:
               
66-386
               

               
Cow position:
               
chr17:18495704-18495392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
144, 45
               

               
Conread position:
               
66-413
               

               
Cow position:
               
chr17:35990902-35991235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
67-470
               

               
Cow position:
               
chr17:37138578-37138971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
69-247
               

               
Cow position:
               
chr17:24773492-24773667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
81, 55
               

               
Conread position:
               
70-327
               

               
Cow position:
               
chr17:12536658-12536401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
135, 54
               

               
Conread position:
               
71-478
               

               
Cow position:
               
chr17:10271302-10271709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 52
               

               
Conread position:
               
72-449
               

               
Cow position:
               
chr17:908558-908927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
76-385
               

               
Cow position:
               
chr17:28847852-28847534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 47
               

               
Conread position:
               
77-265
               

               
Cow position:
               
chr17:14231266-14231089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
85-439
               

               
Cow position:
               
chr17:7594985-7595337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
104, 47
               

               
Conread position:
               
86-329
               

               
Cow position:
               
chr17:8837123-8836880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
93-271
               

               
Cow position:
               
chr17:10510829-10510647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
93-416
               

               
Cow position:
               
chr17:27058721-27058399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
99-309
               

               
Cow position:
               
chr17:37775960-37776166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
62, 24
               

               
Conread position:
               
99-411
               

               
Cow position:
               
chr17:21260112-21259800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
99-473
               

               
Cow position:
               
chr17:37778778-37778414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 24
               

               
Conread position:
               
101-288
               

               
Cow position:
               
chr17:38613087-38613277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
103-329
               

               
Cow position:
               
chr17:18146025-18146251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
103-370
               

               
Cow position:
               
chr17:41811660-41811920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
117-411
               

               
Cow position:
               
chr17:1094665-1094373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
28, 146
               

               
Conread position:
               
122-450
               

               
Cow position:
               
chr17:31037520-31037187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
94, 308
               

               
Conread position:
               
123-475
               

               
Cow position:
               
chr17:4141017-4140675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 102
               

               
Conread position:
               
124-309
               

               
Cow position:
               
chr17:3270177-3270356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
125-459
               

               
Cow position:
               
chr17:35212229-35212563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
97, 69
               

               
Conread position:
               
131-472
               

               
Cow position:
               
chr17:24880613-24880960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
132-475
               

               
Cow position:
               
chr17:7614508-7614154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 88
               

               
Conread position:
               
141-475
               

               
Cow position:
               
chr17:26162547-26162203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 32
               

               
Conread position:
               
143-449
               

               
Cow position:
               
chr17:9056811-9056511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
145-414
               

               
Cow position:
               
chr17:21373563-21373829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
146-352
               

               
Cow position:
               
chr17:7654568-7654359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
147-332
               

               
Cow position:
               
chr17:25501995-25502182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
58, 118
               

               
Conread position:
               
147-474
               

               
Cow position:
               
chr17:33904034-33903702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
147-477
               

               
Cow position:
               
chr17:18569033-18568722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
182, 47
               

               
Conread position:
               
149-413
               

               
Cow position:
               
chr17:11215342-11215077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
149-478
               

               
Cow position:
               
chr17:10561517-10561860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 122
               

               
Conread position:
               
150-480
               

               
Cow position:
               
chr17:6570249-6569920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 7
               

               
Conread position:
               
153-415
               

               
Cow position:
               
chr17:25340263-25340002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
163-486
               

               
Cow position:
               
chr17:15634976-15634652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
167-470
               

               
Cow position:
               
chr17:5787929-5787619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
168-493
               

               
Cow position:
               
chr17:39016004-39016336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 53
               

               
Conread position:
               
171-302
               

               
Cow position:
               
chr17:20608452-20608588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
176-476
               

               
Cow position:
               
chr17:27257318-27256994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
179-415
               

               
Cow position:
               
chr17:5986150-5985916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
100, 30
               

               
Conread position:
               
180-410
               

               
Cow position:
               
chr17:38263568-38263338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
151, 16
               

               
Conread position:
               
186-475
               

               
Cow position:
               
chr17:38139429-38139731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
187-417
               

               
Cow position:
               
chr17:10016026-10015793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
194-479
               

               
Cow position:
               
chr17:21730357-21730070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 109
               

               
Conread position:
               
196-444
               

               
Cow position:
               
chr17:4085689-4085947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
197-422
               

               
Cow position:
               
chr17:8293841-8293617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
133, 19
               

               
Conread position:
               
202-463
               

               
Cow position:
               
chr17:5360496-5360242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
215, 14
               

               
Conread position:
               
206-414
               

               
Cow position:
               
chr17:13716090-13715879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
206-477
               

               
Cow position:
               
chr17:2270945-2271221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
209-415
               

               
Cow position:
               
chr17:5296908-5296701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
214-477
               

               
Cow position:
               
chr17:36400052-36400322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 232
               

               
Conread position:
               
228-415
               

               
Cow position:
               
chr17:1455971-1455786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
236-396
               

               
Cow position:
               
chr17:33153944-33154097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
236-476
               

               
Cow position:
               
chr17:7205394-7205643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
98, 159
               

               
Conread position:
               
243-476
               

               
Cow position:
               
chr17:31798468-31798225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
262-464
               

               
Cow position:
               
chr17:10220851-10221061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
288-479
               

               
Cow position:
               
chr17:15922867-15923064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
126, 0
               
Show alignments to all cow chromosomes.