Cow genome map

Conread name: Pla1-C0000038_D23

Conread position: 1-261
Cow position:
Alignm length: 269
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 75

Conread position: 1-271
Cow position:
Alignm length: 276
Alignm identity: 189
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 25

Conread position: 1-277
Cow position:
Alignm length: 284
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 27

Conread position: 1-305
Cow position:
Alignm length: 316
Alignm identity: 217
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 66, 25

Conread position: 1-316
Cow position:
Alignm length: 329
Alignm identity: 221
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 71, 26

Conread position: 1-329
Cow position:
Alignm length: 336
Alignm identity: 229
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 25

Conread position: 1-378
Cow position:
Alignm length: 399
Alignm identity: 271
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 146, 25

Conread position: 1-396
Cow position:
Alignm length: 413
Alignm identity: 280
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 21, 132

Conread position: 1-413
Cow position:
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 25

Conread position: 1-414
Cow position:
Alignm length: 418
Alignm identity: 274
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 208, 108

Conread position: 1-473
Cow position:
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 28

Conread position: 1-474
Cow position:
Alignm length: 484
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 20

Conread position: 1-476
Cow position:
Alignm length: 486
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 25

Conread position: 1-476
Cow position:
Alignm length: 483
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 25

Conread position: 1-482
Cow position:
Alignm length: 485
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 45

Conread position: 5-354
Cow position:
Alignm length: 362
Alignm identity: 239
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 21

Conread position: 5-412
Cow position:
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 32

Conread position: 6-266
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 20, 44

Conread position: 6-375
Cow position:
Alignm length: 395
Alignm identity: 272
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 26

Conread position: 14-395
Cow position:
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 37

Conread position: 15-272
Cow position:
Alignm length: 262
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 7

Conread position: 16-305
Cow position:
Alignm length: 301
Alignm identity: 215
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 37, 12

Conread position: 17-386
Cow position:
Alignm length: 379
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 99

Conread position: 19-353
Cow position:
Alignm length: 337
Alignm identity: 238
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 93, 35

Conread position: 19-477
Cow position:
Alignm length: 469
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 31

Conread position: 21-259
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 172, 30

Conread position: 21-278
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 29

Conread position: 21-327
Cow position:
Alignm length: 319
Alignm identity: 217
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 93

Conread position: 21-329
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 50, 29

Conread position: 21-333
Cow position:
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 51

Conread position: 21-354
Cow position:
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 29

Conread position: 21-413
Cow position:
Alignm length: 403
Alignm identity: 267
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 172, 30

Conread position: 21-414
Cow position:
Alignm length: 398
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 30

Conread position: 21-437
Cow position:
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 105

Conread position: 21-459
Cow position:
Alignm length: 455
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 108

Conread position: 23-477
Cow position:
Alignm length: 476
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 95

Conread position: 26-476
Cow position:
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 102

Conread position: 29-272
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 22

Conread position: 29-354
Cow position:
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 29-396
Cow position:
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 22

Conread position: 30-329
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 36, 20

Conread position: 30-332
Cow position:
Alignm length: 305
Alignm identity: 206
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 94, 20

Conread position: 30-433
Cow position:
Alignm length: 420
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 71

Conread position: 30-475
Cow position:
Alignm length: 457
Alignm identity: 305
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 143, 21

Conread position: 30-477
Cow position:
Alignm length: 472
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 20

Conread position: 31-271
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 19

Conread position: 31-284
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 94, 20

Conread position: 31-343
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 163, 20

Conread position: 31-473
Cow position:
Alignm length: 453
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 72

Conread position: 32-329
Cow position:
Alignm length: 299
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 263, 17

Conread position: 33-248
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 34, 17

Conread position: 33-388
Cow position:
Alignm length: 373
Alignm identity: 263
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 38, 17

Conread position: 36-385
Cow position:
Alignm length: 353
Alignm identity: 245
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 17

Conread position: 38-332
Cow position:
Alignm length: 300
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 66

Conread position: 40-298
Cow position:
Alignm length: 263
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 14

Conread position: 41-334
Cow position:
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 32

Conread position: 42-329
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 11, 85

Conread position: 51-388
Cow position:
Alignm length: 342
Alignm identity: 242
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 174, 21

Conread position: 52-258
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 21, 73

Conread position: 52-261
Cow position:
Alignm length: 213
Alignm identity: 167
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 170, 23

Conread position: 52-262
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 150, 71

Conread position: 52-276
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 20, 41

Conread position: 52-300
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 32

Conread position: 52-303
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 20

Conread position: 52-320
Cow position:
Alignm length: 275
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 73

Conread position: 52-329
Cow position:
Alignm length: 284
Alignm identity: 193
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 74

Conread position: 52-332
Cow position:
Alignm length: 284
Alignm identity: 198
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 21, 64

Conread position: 52-332
Cow position:
Alignm length: 285
Alignm identity: 196
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 95, 172

Conread position: 52-332
Cow position:
Alignm length: 285
Alignm identity: 205
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 21, 47

Conread position: 52-333
Cow position:
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 65

Conread position: 52-339
Cow position:
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 72

Conread position: 52-349
Cow position:
Alignm length: 305
Alignm identity: 218
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 20, 73

Conread position: 52-352
Cow position:
Alignm length: 311
Alignm identity: 216
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 72

Conread position: 52-352
Cow position:
Alignm length: 310
Alignm identity: 207
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 72, 126

Conread position: 52-372
Cow position:
Alignm length: 326
Alignm identity: 220
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 21, 55

Conread position: 52-396
Cow position:
Alignm length: 349
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 73

Conread position: 52-414
Cow position:
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 52-415
Cow position:
Alignm length: 365
Alignm identity: 262
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 303, 20

Conread position: 52-422
Cow position:
Alignm length: 383
Alignm identity: 253
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 65

Conread position: 52-428
Cow position:
Alignm length: 384
Alignm identity: 263
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 263, 72

Conread position: 52-429
Cow position:
Alignm length: 393
Alignm identity: 265
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 9

Conread position: 52-436
Cow position:
Alignm length: 398
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 14

Conread position: 52-444
Cow position:
Alignm length: 398
Alignm identity: 269
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 20, 72

Conread position: 52-474
Cow position:
Alignm length: 437
Alignm identity: 282
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 161, 16

Conread position: 52-476
Cow position:
Alignm length: 448
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 72

Conread position: 53-478
Cow position:
Alignm length: 449
Alignm identity: 300
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 264, 62

Conread position: 54-412
Cow position:
Alignm length: 368
Alignm identity: 249
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 21, 70

Conread position: 54-476
Cow position:
Alignm length: 444
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 55-262
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 57

Conread position: 55-329
Cow position:
Alignm length: 278
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 57

Conread position: 56-276
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 12, 69

Conread position: 56-279
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 16, 69

Conread position: 56-281
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 67

Conread position: 56-329
Cow position:
Alignm length: 278
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 80

Conread position: 56-444
Cow position:
Alignm length: 404
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 68

Conread position: 57-414
Cow position:
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 58-387
Cow position:
Alignm length: 339
Alignm identity: 236
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 14, 58

Conread position: 59-475
Cow position:
Alignm length: 442
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 68

Conread position: 60-333
Cow position:
Alignm length: 278
Alignm identity: 180
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 74, 16

Conread position: 66-479
Cow position:
Alignm length: 429
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 58

Conread position: 66-486
Cow position:
Alignm length: 431
Alignm identity: 281
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 75, 31

Conread position: 71-313
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 87, 53

Conread position: 72-386
Cow position:
Alignm length: 323
Alignm identity: 228
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 65, 30

Conread position: 72-413
Cow position:
Alignm length: 353
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 52

Conread position: 74-475
Cow position:
Alignm length: 417
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 49

Conread position: 77-479
Cow position:
Alignm length: 417
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 22

Conread position: 85-433
Cow position:
Alignm length: 356
Alignm identity: 231
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 39, 193

Conread position: 94-413
Cow position:
Alignm length: 321
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 29

Conread position: 99-332
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 25

Conread position: 100-329
Cow position:
Alignm length: 234
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 24

Conread position: 100-476
Cow position:
Alignm length: 386
Alignm identity: 260
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 113, 23

Conread position: 106-369
Cow position:
Alignm length: 275
Alignm identity: 206
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 31, 17

Conread position: 122-412
Cow position:
Alignm length: 295
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 146

Conread position: 122-477
Cow position:
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 72

Conread position: 122-477
Cow position:
Alignm length: 366
Alignm identity: 259
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 80, 146

Conread position: 123-413
Cow position:
Alignm length: 297
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 87

Conread position: 133-366
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 75, 5

Conread position: 140-303
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 141-412
Cow position:
Alignm length: 280
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 145-411
Cow position:
Alignm length: 276
Alignm identity: 191
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 61, 12

Conread position: 146-477
Cow position:
Alignm length: 348
Alignm identity: 236
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 73, 67

Conread position: 150-415
Cow position:
Alignm length: 277
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 150-477
Cow position:
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 214

Conread position: 159-425
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 31, 112

Conread position: 161-425
Cow position:
Alignm length: 271
Alignm identity: 200
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 59, 116

Conread position: 162-470
Cow position:
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 92

Conread position: 171-352
Cow position:
Alignm length: 184
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 42, 25

Conread position: 174-479
Cow position:
Alignm length: 315
Alignm identity: 229
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 48, 103

Conread position: 183-415
Cow position:
Alignm length: 239
Alignm identity: 172
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 6, 38

Conread position: 186-414
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 62

Conread position: 206-413
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 13, 53

Conread position: 207-369
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 210-415
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 88

Conread position: 214-444
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 116, 60

Conread position: 222-470
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 188, 46

Conread position: 225-477
Cow position:
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 192, 53

Conread position: 226-476
Cow position:
Alignm length: 258
Alignm identity: 179
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 185, 55

Conread position: 231-406
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 42

Conread position: 240-474
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 194

Conread position: 241-477
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 23

Conread position: 244-477
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 47

Conread position: 278-476
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 0

Show alignments to all cow chromosomes.