Cow genome map

Conread name: Pla1-C0000038_D23

Conread position: 1-192
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 113

Conread position: 1-265
Cow position:
Alignm length: 269
Alignm identity: 191
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 204, 26

Conread position: 1-276
Cow position:
Alignm length: 277
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 25

Conread position: 1-296
Cow position:
Alignm length: 307
Alignm identity: 201
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 24

Conread position: 1-305
Cow position:
Alignm length: 322
Alignm identity: 217
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 60

Conread position: 1-327
Cow position:
Alignm length: 336
Alignm identity: 235
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 71, 25

Conread position: 1-328
Cow position:
Alignm length: 340
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 71, 24

Conread position: 1-329
Cow position:
Alignm length: 337
Alignm identity: 233
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 71, 24

Conread position: 1-332
Cow position:
Alignm length: 336
Alignm identity: 235
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 66, 25

Conread position: 1-341
Cow position:
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 26

Conread position: 1-342
Cow position:
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 113

Conread position: 1-468
Cow position:
Alignm length: 478
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 22

Conread position: 1-475
Cow position:
Alignm length: 501
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 127

Conread position: 1-476
Cow position:
Alignm length: 493
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 44

Conread position: 1-477
Cow position:
Alignm length: 497
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 132

Conread position: 2-354
Cow position:
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 12

Conread position: 4-259
Cow position:
Alignm length: 261
Alignm identity: 193
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 17, 115

Conread position: 4-275
Cow position:
Alignm length: 282
Alignm identity: 202
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 63, 23

Conread position: 4-333
Cow position:
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 36

Conread position: 4-349
Cow position:
Alignm length: 360
Alignm identity: 251
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 22, 40

Conread position: 4-475
Cow position:
Alignm length: 488
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 23

Conread position: 6-327
Cow position:
Alignm length: 330
Alignm identity: 217
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 47

Conread position: 6-476
Cow position:
Alignm length: 489
Alignm identity: 323
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 8

Conread position: 12-415
Cow position:
Alignm length: 410
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 40

Conread position: 14-254
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 37

Conread position: 14-282
Cow position:
Alignm length: 271
Alignm identity: 191
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 41, 96

Conread position: 14-327
Cow position:
Alignm length: 319
Alignm identity: 222
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 39, 29

Conread position: 17-387
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 32

Conread position: 19-276
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 14

Conread position: 19-415
Cow position:
Alignm length: 410
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 23

Conread position: 19-432
Cow position:
Alignm length: 428
Alignm identity: 286
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 65

Conread position: 19-488
Cow position:
Alignm length: 473
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 16

Conread position: 20-429
Cow position:
Alignm length: 423
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 93

Conread position: 21-382
Cow position:
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 63

Conread position: 21-464
Cow position:
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 48

Conread position: 21-476
Cow position:
Alignm length: 469
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 105

Conread position: 25-410
Cow position:
Alignm length: 395
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 101

Conread position: 25-473
Cow position:
Alignm length: 466
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 70

Conread position: 29-414
Cow position:
Alignm length: 398
Alignm identity: 270
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 14, 98

Conread position: 29-461
Cow position:
Alignm length: 443
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 21

Conread position: 29-477
Cow position:
Alignm length: 466
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 21

Conread position: 30-254
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 153, 20

Conread position: 30-276
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 21

Conread position: 30-279
Cow position:
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 21

Conread position: 30-305
Cow position:
Alignm length: 277
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 20

Conread position: 30-332
Cow position:
Alignm length: 307
Alignm identity: 216
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 21

Conread position: 30-350
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 156, 20

Conread position: 30-352
Cow position:
Alignm length: 333
Alignm identity: 228
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 37, 20

Conread position: 30-396
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 20

Conread position: 30-413
Cow position:
Alignm length: 390
Alignm identity: 253
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 22

Conread position: 30-449
Cow position:
Alignm length: 426
Alignm identity: 288
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 20

Conread position: 30-461
Cow position:
Alignm length: 445
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 18

Conread position: 33-258
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 17

Conread position: 33-461
Cow position:
Alignm length: 440
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 17

Conread position: 34-415
Cow position:
Alignm length: 398
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 36-271
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 91

Conread position: 36-333
Cow position:
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 14

Conread position: 37-375
Cow position:
Alignm length: 349
Alignm identity: 254
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 108, 14

Conread position: 37-415
Cow position:
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 100

Conread position: 37-479
Cow position:
Alignm length: 466
Alignm identity: 305
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 91

Conread position: 40-321
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 13, 32

Conread position: 42-396
Cow position:
Alignm length: 369
Alignm identity: 247
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 9, 90

Conread position: 52-256
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 141, 20

Conread position: 52-262
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 61

Conread position: 52-275
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 15, 84

Conread position: 52-281
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 73

Conread position: 52-283
Cow position:
Alignm length: 239
Alignm identity: 184
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 93, 71

Conread position: 52-301
Cow position:
Alignm length: 259
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 74

Conread position: 52-309
Cow position:
Alignm length: 267
Alignm identity: 200
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 88, 20

Conread position: 52-311
Cow position:
Alignm length: 262
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 74

Conread position: 52-328
Cow position:
Alignm length: 284
Alignm identity: 189
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 135, 64

Conread position: 52-329
Cow position:
Alignm length: 284
Alignm identity: 187
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 33

Conread position: 52-332
Cow position:
Alignm length: 283
Alignm identity: 194
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 20, 35

Conread position: 52-332
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 93, 20

Conread position: 52-332
Cow position:
Alignm length: 289
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 52-354
Cow position:
Alignm length: 309
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 74

Conread position: 52-412
Cow position:
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 72

Conread position: 52-415
Cow position:
Alignm length: 367
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 71

Conread position: 52-416
Cow position:
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 71

Conread position: 52-436
Cow position:
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 74

Conread position: 52-474
Cow position:
Alignm length: 438
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 85

Conread position: 52-476
Cow position:
Alignm length: 441
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 88

Conread position: 52-476
Cow position:
Alignm length: 443
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 76

Conread position: 52-477
Cow position:
Alignm length: 434
Alignm identity: 296
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 168, 17

Conread position: 52-480
Cow position:
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 14

Conread position: 53-472
Cow position:
Alignm length: 431
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 7

Conread position: 54-270
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 156, 18

Conread position: 54-444
Cow position:
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 33

Conread position: 55-412
Cow position:
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 69

Conread position: 55-477
Cow position:
Alignm length: 438
Alignm identity: 292
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 37, 17

Conread position: 57-475
Cow position:
Alignm length: 433
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 66

Conread position: 58-268
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 78

Conread position: 58-276
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 148, 66

Conread position: 59-456
Cow position:
Alignm length: 409
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 65

Conread position: 61-268
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 75

Conread position: 67-315
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 152, 30

Conread position: 68-382
Cow position:
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 38

Conread position: 68-417
Cow position:
Alignm length: 362
Alignm identity: 244
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 67

Conread position: 70-354
Cow position:
Alignm length: 290
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 137, 53

Conread position: 71-268
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 64

Conread position: 75-266
Cow position:
Alignm length: 195
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 50

Conread position: 78-287
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 144, 44

Conread position: 81-470
Cow position:
Alignm length: 404
Alignm identity: 281
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 95, 42

Conread position: 82-360
Cow position:
Alignm length: 283
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 246, 42

Conread position: 83-475
Cow position:
Alignm length: 407
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 41

Conread position: 85-369
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 41, 139

Conread position: 89-329
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 35

Conread position: 94-484
Cow position:
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 19

Conread position: 99-339
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 99-449
Cow position:
Alignm length: 372
Alignm identity: 251
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 41, 25

Conread position: 102-470
Cow position:
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 119

Conread position: 106-476
Cow position:
Alignm length: 386
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 17

Conread position: 121-388
Cow position:
Alignm length: 274
Alignm identity: 205
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 99, 30

Conread position: 122-412
Cow position:
Alignm length: 298
Alignm identity: 216
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 15, 149

Conread position: 123-454
Cow position:
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 50

Conread position: 130-415
Cow position:
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 117

Conread position: 132-415
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 79

Conread position: 137-394
Cow position:
Alignm length: 262
Alignm identity: 184
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 73, 16

Conread position: 137-492
Cow position:
Alignm length: 367
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 139

Conread position: 140-390
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 127

Conread position: 140-413
Cow position:
Alignm length: 280
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 21

Conread position: 144-413
Cow position:
Alignm length: 279
Alignm identity: 186
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 144, 53

Conread position: 146-395
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 129, 12

Conread position: 146-477
Cow position:
Alignm length: 348
Alignm identity: 229
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 11

Conread position: 151-268
Cow position:
Alignm length: 124
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 153-414
Cow position:
Alignm length: 265
Alignm identity: 182
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 52, 109

Conread position: 158-358
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 112

Conread position: 159-329
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 165-301
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 171-388
Cow position:
Alignm length: 218
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 184-382
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 33

Conread position: 192-328
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 15

Conread position: 206-479
Cow position:
Alignm length: 281
Alignm identity: 198
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 14

Conread position: 209-415
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 120, 13

Conread position: 210-483
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 106, 11

Conread position: 211-477
Cow position:
Alignm length: 288
Alignm identity: 205
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 222-483
Cow position:
Alignm length: 269
Alignm identity: 197
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 199, 55

Conread position: 226-480
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 237

Conread position: 228-403
Cow position:
Alignm length: 180
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 101, 49

Conread position: 244-479
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 75, 237

Conread position: 271-413
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 274-491
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 113

Conread position: 289-477
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 311-477
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 35

Show alignments to all cow chromosomes.