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Cow genome map

           
Conread name:
           
Pla1-C0000038_D23
        

               
Conread position:
               
1-257
               

               
Cow position:
               
chr2:16692865-16693112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr2:13342271-13342012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr2:4254827-4254558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr2:41451937-41452213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr2:39376061-39376329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
190, 25
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr2:46033033-46033314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr2:17341283-17341576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
210, 22
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr2:7534070-7533769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr2:9062979-9063298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr2:19493913-19494238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr2:32114774-32115104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr2:29268773-29269094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
204, 25
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr2:23493243-23493565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
134, 25
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr2:63865622-63865292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr2:28303031-28303433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
186, 24
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr2:549610-549215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr2:30639898-30640310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 24
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr2:14749298-14749708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr2:43718618-43719016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr2:22859942-22859465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr2:64197282-64196824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr2:39855496-39855963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 24
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr2:27613317-27612854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 26
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr2:6055672-6056151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr2:70752486-70752977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 114
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr2:85246631-85246352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
4-413
               

               
Cow position:
               
chr2:38376599-38377016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr2:45936241-45936001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
205, 22
               

               
Conread position:
               
5-413
               

               
Cow position:
               
chr2:44081162-44081549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
7-283
               

               
Cow position:
               
chr2:42599640-42599913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
138, 18
               

               
Conread position:
               
7-412
               

               
Cow position:
               
chr2:69747909-69747502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
7-456
               

               
Cow position:
               
chr2:18061919-18061466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
9-432
               

               
Cow position:
               
chr2:80248-79823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
5, 42
               

               
Conread position:
               
11-271
               

               
Cow position:
               
chr2:20980114-20980368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
11-412
               

               
Cow position:
               
chr2:76822542-76822145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 8
               

               
Conread position:
               
12-334
               

               
Cow position:
               
chr2:56771559-56771856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
12-354
               

               
Cow position:
               
chr2:46175564-46175205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
13-397
               

               
Cow position:
               
chr2:2401-2030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
288, 38
               

               
Conread position:
               
14-329
               

               
Cow position:
               
chr2:13354386-13354702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
17-416
               

               
Cow position:
               
chr2:69046756-69047136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
17-483
               

               
Cow position:
               
chr2:51638262-51638744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
18-296
               

               
Cow position:
               
chr2:13001531-13001800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
18-477
               

               
Cow position:
               
chr2:192739-192280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
19-271
               

               
Cow position:
               
chr2:29546277-29546025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 31
               

               
Conread position:
               
19-327
               

               
Cow position:
               
chr2:46189376-46189072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
19-332
               

               
Cow position:
               
chr2:36878500-36878189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
19-332
               

               
Cow position:
               
chr2:64972797-64973102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
19-474
               

               
Cow position:
               
chr2:53497167-53496736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
20-261
               

               
Cow position:
               
chr2:48874819-48874557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
20-380
               

               
Cow position:
               
chr2:62818993-62818624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
21-305
               

               
Cow position:
               
chr2:73069441-73069729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
21-332
               

               
Cow position:
               
chr2:62978939-62978644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
21-412
               

               
Cow position:
               
chr2:40492093-40492471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
21-412
               

               
Cow position:
               
chr2:52777004-52777386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
21-414
               

               
Cow position:
               
chr2:469381-469751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
21-415
               

               
Cow position:
               
chr2:50606269-50606654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 103
               

               
Conread position:
               
21-478
               

               
Cow position:
               
chr2:42309835-42309365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
21-481
               

               
Cow position:
               
chr2:40428079-40427607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
21-486
               

               
Cow position:
               
chr2:29382949-29382481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
22-473
               

               
Cow position:
               
chr2:46741198-46741665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
26-475
               

               
Cow position:
               
chr2:52170980-52171433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
28-309
               

               
Cow position:
               
chr2:85067389-85067108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
28-329
               

               
Cow position:
               
chr2:4273539-4273240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
28-393
               

               
Cow position:
               
chr2:4796498-4796846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
29-372
               

               
Cow position:
               
chr2:57509149-57509475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 21
               

               
Conread position:
               
29-416
               

               
Cow position:
               
chr2:24593625-24593985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
182, 22
               

               
Conread position:
               
30-262
               

               
Cow position:
               
chr2:71921958-71922190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
30-273
               

               
Cow position:
               
chr2:31673008-31673242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
30-282
               

               
Cow position:
               
chr2:60238030-60238277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
237, 20
               

               
Conread position:
               
30-292
               

               
Cow position:
               
chr2:69676802-69676543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
30-328
               

               
Cow position:
               
chr2:47116180-47115894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
30-412
               

               
Cow position:
               
chr2:42255164-42255549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
30-416
               

               
Cow position:
               
chr2:26438993-26438608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
30-434
               

               
Cow position:
               
chr2:62225915-62226310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
30-461
               

               
Cow position:
               
chr2:14099380-14099818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
30-470
               

               
Cow position:
               
chr2:59380735-59380320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
30-479
               

               
Cow position:
               
chr2:43773842-43773399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 18
               

               
Conread position:
               
31-259
               

               
Cow position:
               
chr2:22035385-22035605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
188, 19
               

               
Conread position:
               
31-278
               

               
Cow position:
               
chr2:80325114-80324874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 19
               

               
Conread position:
               
33-238
               

               
Cow position:
               
chr2:43624795-43624592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
33-327
               

               
Cow position:
               
chr2:38965355-38965644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
33-329
               

               
Cow position:
               
chr2:36007844-36007558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
33-329
               

               
Cow position:
               
chr2:51594501-51594791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
33-396
               

               
Cow position:
               
chr2:31910288-31909929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
33-477
               

               
Cow position:
               
chr2:42925035-42925476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 183
               

               
Conread position:
               
34-332
               

               
Cow position:
               
chr2:50445631-50445931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
34-354
               

               
Cow position:
               
chr2:10485289-10485597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
34-474
               

               
Cow position:
               
chr2:72902554-72902106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
34-476
               

               
Cow position:
               
chr2:21182896-21183330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
35-327
               

               
Cow position:
               
chr2:18621144-18621434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
37-477
               

               
Cow position:
               
chr2:33659962-33659516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
39-280
               

               
Cow position:
               
chr2:36997895-36998140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
39-477
               

               
Cow position:
               
chr2:7721162-7720728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
43-477
               

               
Cow position:
               
chr2:82311465-82311007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
45-288
               

               
Cow position:
               
chr2:40979954-40979723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
63, 80
               

               
Conread position:
               
52-258
               

               
Cow position:
               
chr2:32406437-32406639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
95, 10
               

               
Conread position:
               
52-258
               

               
Cow position:
               
chr2:36630720-36630931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
52-258
               

               
Cow position:
               
chr2:75600463-75600682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
52-271
               

               
Cow position:
               
chr2:45575245-45575023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
52-275
               

               
Cow position:
               
chr2:56821647-56821419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
52-315
               

               
Cow position:
               
chr2:1918537-1918287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr2:21284688-21284957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr2:40403270-40403003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr2:73095033-73094771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
52-343
               

               
Cow position:
               
chr2:80800470-80800749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
52-371
               

               
Cow position:
               
chr2:63288398-63288080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
167, 50
               

               
Conread position:
               
52-375
               

               
Cow position:
               
chr2:53717230-53716906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
52-396
               

               
Cow position:
               
chr2:45439206-45439532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
52-413
               

               
Cow position:
               
chr2:56351166-56350803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
52-414
               

               
Cow position:
               
chr2:70579962-70579588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
52-415
               

               
Cow position:
               
chr2:70790990-70790637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
52-419
               

               
Cow position:
               
chr2:85250106-85250454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
52-421
               

               
Cow position:
               
chr2:70895780-70896156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
52-460
               

               
Cow position:
               
chr2:4384141-4383729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 71
               

               
Conread position:
               
52-472
               

               
Cow position:
               
chr2:70704005-70704435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
52-475
               

               
Cow position:
               
chr2:9173510-9173098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
52-475
               

               
Cow position:
               
chr2:41313640-41314071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
52-475
               

               
Cow position:
               
chr2:48748973-48748547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 66
               

               
Conread position:
               
52-477
               

               
Cow position:
               
chr2:49480848-49480406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
53-275
               

               
Cow position:
               
chr2:39941238-39941466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
53-342
               

               
Cow position:
               
chr2:60182575-60182269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 167
               

               
Conread position:
               
53-470
               

               
Cow position:
               
chr2:14555999-14555576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
53-474
               

               
Cow position:
               
chr2:32453756-32453349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
54-278
               

               
Cow position:
               
chr2:43578044-43577819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
54-339
               

               
Cow position:
               
chr2:77214481-77214767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
55-409
               

               
Cow position:
               
chr2:54890075-54890428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
55-411
               

               
Cow position:
               
chr2:6697736-6697391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
150, 15
               

               
Conread position:
               
55-413
               

               
Cow position:
               
chr2:32498873-32498517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
55-433
               

               
Cow position:
               
chr2:15769736-15769372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
55-456
               

               
Cow position:
               
chr2:10356921-10356514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
56-258
               

               
Cow position:
               
chr2:48617733-48617940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
56-278
               

               
Cow position:
               
chr2:52386166-52385938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
56-327
               

               
Cow position:
               
chr2:46330811-46331087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
56-386
               

               
Cow position:
               
chr2:85339705-85339370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
57-476
               

               
Cow position:
               
chr2:29612321-29612735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
58-477
               

               
Cow position:
               
chr2:31457243-31457673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
59-364
               

               
Cow position:
               
chr2:62644357-62644652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
59-477
               

               
Cow position:
               
chr2:38118232-38117820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
59-478
               

               
Cow position:
               
chr2:72583667-72584107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
60-269
               

               
Cow position:
               
chr2:53430486-53430697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
123, 64
               

               
Conread position:
               
60-412
               

               
Cow position:
               
chr2:304598-304270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
218, 63
               

               
Conread position:
               
60-417
               

               
Cow position:
               
chr2:16428641-16428283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
60-436
               

               
Cow position:
               
chr2:38273302-38273689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
60-473
               

               
Cow position:
               
chr2:4070675-4071102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
60-474
               

               
Cow position:
               
chr2:50400178-50400592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
63-411
               

               
Cow position:
               
chr2:70601759-70602112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
5, 61
               

               
Conread position:
               
64-281
               

               
Cow position:
               
chr2:46909673-46909457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
64-470
               

               
Cow position:
               
chr2:26042475-26042061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 37
               

               
Conread position:
               
65-442
               

               
Cow position:
               
chr2:793412-793796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
65-476
               

               
Cow position:
               
chr2:425583-425998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 58
               

               
Conread position:
               
66-326
               

               
Cow position:
               
chr2:56102704-56102431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
80, 59
               

               
Conread position:
               
66-396
               

               
Cow position:
               
chr2:32393184-32393511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
149, 31
               

               
Conread position:
               
66-414
               

               
Cow position:
               
chr2:40313137-40313480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 17
               

               
Conread position:
               
67-413
               

               
Cow position:
               
chr2:72183723-72183377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 136
               

               
Conread position:
               
67-479
               

               
Cow position:
               
chr2:81349118-81348690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
76-305
               

               
Cow position:
               
chr2:60463040-60462820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
129, 48
               

               
Conread position:
               
76-305
               

               
Cow position:
               
chr2:60468419-60468199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
129, 48
               

               
Conread position:
               
76-411
               

               
Cow position:
               
chr2:66780079-66779751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
116, 26
               

               
Conread position:
               
76-474
               

               
Cow position:
               
chr2:1651179-1651579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
81-305
               

               
Cow position:
               
chr2:19154089-19154314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
139, 42
               

               
Conread position:
               
82-306
               

               
Cow position:
               
chr2:82648037-82647814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
129, 8
               

               
Conread position:
               
86-310
               

               
Cow position:
               
chr2:80868868-80869094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
86-414
               

               
Cow position:
               
chr2:29288816-29289138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
87-262
               

               
Cow position:
               
chr2:39513813-39513986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 15
               

               
Conread position:
               
94-272
               

               
Cow position:
               
chr2:58686737-58686907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
111, 30
               

               
Conread position:
               
94-354
               

               
Cow position:
               
chr2:40488605-40488861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
94-413
               

               
Cow position:
               
chr2:56042551-56042250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
261, 24
               

               
Conread position:
               
99-352
               

               
Cow position:
               
chr2:46120838-46120589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
99-380
               

               
Cow position:
               
chr2:2382764-2382476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
99-477
               

               
Cow position:
               
chr2:39786822-39787205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
106, 14
               

               
Conread position:
               
101-387
               

               
Cow position:
               
chr2:9324794-9325088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
103-329
               

               
Cow position:
               
chr2:37787361-37787136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
104-353
               

               
Cow position:
               
chr2:80595509-80595260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 19
               

               
Conread position:
               
106-470
               

               
Cow position:
               
chr2:6443833-6444209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
112-261
               

               
Cow position:
               
chr2:63488794-63488950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
112-403
               

               
Cow position:
               
chr2:54306485-54306764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
113-396
               

               
Cow position:
               
chr2:65749478-65749753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
222, 11
               

               
Conread position:
               
116-412
               

               
Cow position:
               
chr2:39471947-39472236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
103, 5
               

               
Conread position:
               
116-413
               

               
Cow position:
               
chr2:57293459-57293166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
142, 16
               

               
Conread position:
               
121-258
               

               
Cow position:
               
chr2:32361589-32361732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
121-276
               

               
Cow position:
               
chr2:68239057-68239209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
121-415
               

               
Cow position:
               
chr2:39499647-39499922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
121-479
               

               
Cow position:
               
chr2:20868440-20868098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
283, 64
               

               
Conread position:
               
122-413
               

               
Cow position:
               
chr2:17346887-17347164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
63, 145
               

               
Conread position:
               
125-283
               

               
Cow position:
               
chr2:1638421-1638583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 141
               

               
Conread position:
               
132-344
               

               
Cow position:
               
chr2:58770811-58771014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
132-369
               

               
Cow position:
               
chr2:61820956-61820720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 145
               

               
Conread position:
               
137-332
               

               
Cow position:
               
chr2:78219932-78220128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
137-352
               

               
Cow position:
               
chr2:70780931-70781143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 88
               

               
Conread position:
               
137-393
               

               
Cow position:
               
chr2:2740300-2740555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
137-444
               

               
Cow position:
               
chr2:45726025-45726326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
140-298
               

               
Cow position:
               
chr2:18889547-18889386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
140-333
               

               
Cow position:
               
chr2:53189035-53189216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
141-415
               

               
Cow position:
               
chr2:70306001-70306259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
141-477
               

               
Cow position:
               
chr2:7498423-7498760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
146-390
               

               
Cow position:
               
chr2:61950367-61950604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
147-488
               

               
Cow position:
               
chr2:58685223-58685582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
151-415
               

               
Cow position:
               
chr2:24106246-24106512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
168, 68
               

               
Conread position:
               
153-476
               

               
Cow position:
               
chr2:31113698-31114017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 124
               

               
Conread position:
               
154-476
               

               
Cow position:
               
chr2:20916134-20915812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
175, 66
               

               
Conread position:
               
156-415
               

               
Cow position:
               
chr2:10484738-10484494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
161, 66
               

               
Conread position:
               
159-479
               

               
Cow position:
               
chr2:67485100-67485431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
62, 120
               

               
Conread position:
               
161-294
               

               
Cow position:
               
chr2:63657946-63658080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
161-414
               

               
Cow position:
               
chr2:70224237-70223988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
161-477
               

               
Cow position:
               
chr2:51027821-51028139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
121, 45
               

               
Conread position:
               
163-412
               

               
Cow position:
               
chr2:40791041-40791281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
164-470
               

               
Cow position:
               
chr2:62309566-62309259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 136
               

               
Conread position:
               
174-474
               

               
Cow position:
               
chr2:20250576-20250889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
22, 192
               

               
Conread position:
               
182-414
               

               
Cow position:
               
chr2:77033559-77033799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
183-476
               

               
Cow position:
               
chr2:83745152-83744872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
194-393
               

               
Cow position:
               
chr2:12199014-12198814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
196-406
               

               
Cow position:
               
chr2:39672854-39672640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
200-477
               

               
Cow position:
               
chr2:73999627-73999907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
204-477
               

               
Cow position:
               
chr2:39832295-39832567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 67
               

               
Conread position:
               
205-394
               

               
Cow position:
               
chr2:68655215-68655403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr2:6935369-6935170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
218-388
               

               
Cow position:
               
chr2:7947226-7947053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
111, 147
               

               
Conread position:
               
219-476
               

               
Cow position:
               
chr2:15162661-15162922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
116, 147
               

               
Conread position:
               
223-414
               

               
Cow position:
               
chr2:77982212-77982032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
224-382
               

               
Cow position:
               
chr2:73386924-73386763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
105, 157
               

               
Conread position:
               
233-479
               

               
Cow position:
               
chr2:2937501-2937739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
183, 40
               

               
Conread position:
               
236-388
               

               
Cow position:
               
chr2:31558304-31558455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
236-401
               

               
Cow position:
               
chr2:39802376-39802208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
244-477
               

               
Cow position:
               
chr2:36294769-36295013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
140, 150
               

               
Conread position:
               
258-477
               

               
Cow position:
               
chr2:68273539-68273762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
155, 16
               

               
Conread position:
               
276-472
               

               
Cow position:
               
chr2:8601706-8601506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
141, 94
               

               
Conread position:
               
277-476
               

               
Cow position:
               
chr2:39912619-39912412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
281-477
               

               
Cow position:
               
chr2:45435083-45435282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
136, 23
               

               
Conread position:
               
283-479
               

               
Cow position:
               
chr2:42774262-42774463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
287-478
               

               
Cow position:
               
chr2:61442584-61442782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
126, 0
               
Show alignments to all cow chromosomes.