Cow genome map

Conread name: Pla1-C0000038_D23

Conread position: 1-276
Cow position:
Alignm length: 278
Alignm identity: 206
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 199, 26

Conread position: 1-276
Cow position:
Alignm length: 282
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 53

Conread position: 1-280
Cow position:
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 14

Conread position: 1-283
Cow position:
Alignm length: 287
Alignm identity: 212
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 154, 25

Conread position: 1-291
Cow position:
Alignm length: 315
Alignm identity: 220
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 40

Conread position: 1-305
Cow position:
Alignm length: 307
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 204, 26

Conread position: 1-314
Cow position:
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 52

Conread position: 1-327
Cow position:
Alignm length: 333
Alignm identity: 228
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 23

Conread position: 1-333
Cow position:
Alignm length: 339
Alignm identity: 241
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 18, 107

Conread position: 1-375
Cow position:
Alignm length: 381
Alignm identity: 254
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 68, 25

Conread position: 1-382
Cow position:
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 26

Conread position: 5-388
Cow position:
Alignm length: 399
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 20

Conread position: 12-333
Cow position:
Alignm length: 333
Alignm identity: 232
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 15

Conread position: 13-239
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 32

Conread position: 19-352
Cow position:
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 30

Conread position: 19-388
Cow position:
Alignm length: 379
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 105

Conread position: 19-460
Cow position:
Alignm length: 460
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 23

Conread position: 19-476
Cow position:
Alignm length: 474
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 31

Conread position: 19-477
Cow position:
Alignm length: 479
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 24

Conread position: 20-394
Cow position:
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 20-475
Cow position:
Alignm length: 474
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 104

Conread position: 21-270
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 184, 30

Conread position: 21-317
Cow position:
Alignm length: 300
Alignm identity: 210
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 28

Conread position: 21-333
Cow position:
Alignm length: 316
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 173

Conread position: 21-451
Cow position:
Alignm length: 437
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 29

Conread position: 21-476
Cow position:
Alignm length: 468
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 29

Conread position: 21-478
Cow position:
Alignm length: 472
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 25-412
Cow position:
Alignm length: 403
Alignm identity: 262
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 25

Conread position: 29-332
Cow position:
Alignm length: 313
Alignm identity: 211
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 21

Conread position: 29-450
Cow position:
Alignm length: 436
Alignm identity: 290
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 68, 22

Conread position: 30-282
Cow position:
Alignm length: 261
Alignm identity: 190
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 18

Conread position: 30-302
Cow position:
Alignm length: 284
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 21

Conread position: 30-329
Cow position:
Alignm length: 303
Alignm identity: 214
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 20

Conread position: 30-332
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 21

Conread position: 30-387
Cow position:
Alignm length: 367
Alignm identity: 248
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 103, 21

Conread position: 30-412
Cow position:
Alignm length: 393
Alignm identity: 269
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 37, 21

Conread position: 30-413
Cow position:
Alignm length: 390
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 20

Conread position: 30-432
Cow position:
Alignm length: 412
Alignm identity: 279
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 156, 21

Conread position: 30-443
Cow position:
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 30-482
Cow position:
Alignm length: 467
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 31-277
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 182, 12

Conread position: 31-282
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 180, 19

Conread position: 32-282
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 178, 18

Conread position: 32-295
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 115, 18

Conread position: 33-280
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 40, 17

Conread position: 34-327
Cow position:
Alignm length: 296
Alignm identity: 196
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 171, 16

Conread position: 34-334
Cow position:
Alignm length: 309
Alignm identity: 209
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 17

Conread position: 34-366
Cow position:
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 12

Conread position: 36-352
Cow position:
Alignm length: 321
Alignm identity: 225
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 13

Conread position: 37-276
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 108, 13

Conread position: 37-477
Cow position:
Alignm length: 459
Alignm identity: 305
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 14

Conread position: 42-304
Cow position:
Alignm length: 271
Alignm identity: 192
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 11, 85

Conread position: 52-268
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 93, 20

Conread position: 52-270
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 93, 71

Conread position: 52-271
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 73

Conread position: 52-281
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 73

Conread position: 52-282
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 84

Conread position: 52-313
Cow position:
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 44

Conread position: 52-315
Cow position:
Alignm length: 274
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 16, 73

Conread position: 52-332
Cow position:
Alignm length: 293
Alignm identity: 198
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 172

Conread position: 52-332
Cow position:
Alignm length: 285
Alignm identity: 204
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 20, 74

Conread position: 52-354
Cow position:
Alignm length: 316
Alignm identity: 219
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 21, 8

Conread position: 52-358
Cow position:
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 62

Conread position: 52-396
Cow position:
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 29

Conread position: 52-396
Cow position:
Alignm length: 353
Alignm identity: 242
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 73

Conread position: 52-412
Cow position:
Alignm length: 372
Alignm identity: 246
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 27

Conread position: 52-413
Cow position:
Alignm length: 368
Alignm identity: 241
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 14, 73

Conread position: 52-414
Cow position:
Alignm length: 376
Alignm identity: 243
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 114

Conread position: 52-414
Cow position:
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 72

Conread position: 52-415
Cow position:
Alignm length: 366
Alignm identity: 250
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 20, 49

Conread position: 52-456
Cow position:
Alignm length: 418
Alignm identity: 265
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 18, 73

Conread position: 52-462
Cow position:
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 72

Conread position: 52-476
Cow position:
Alignm length: 431
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 74

Conread position: 52-476
Cow position:
Alignm length: 443
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 71

Conread position: 52-476
Cow position:
Alignm length: 436
Alignm identity: 295
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 16, 60

Conread position: 56-449
Cow position:
Alignm length: 409
Alignm identity: 264
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 15

Conread position: 56-478
Cow position:
Alignm length: 436
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 70

Conread position: 59-270
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 127, 65

Conread position: 60-332
Cow position:
Alignm length: 278
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 9, 65

Conread position: 60-475
Cow position:
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 15

Conread position: 66-375
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 59

Conread position: 66-412
Cow position:
Alignm length: 356
Alignm identity: 249
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 140, 58

Conread position: 66-416
Cow position:
Alignm length: 358
Alignm identity: 241
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 140, 37

Conread position: 67-354
Cow position:
Alignm length: 290
Alignm identity: 212
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 63, 16

Conread position: 68-314
Cow position:
Alignm length: 249
Alignm identity: 179
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 157, 0

Conread position: 70-431
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 54

Conread position: 72-313
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 52

Conread position: 73-332
Cow position:
Alignm length: 263
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 38

Conread position: 74-312
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 128, 9

Conread position: 75-415
Cow position:
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 104

Conread position: 88-330
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 117, 35

Conread position: 89-327
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 32

Conread position: 98-329
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 26

Conread position: 98-350
Cow position:
Alignm length: 260
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 128

Conread position: 102-396
Cow position:
Alignm length: 307
Alignm identity: 210
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 7, 78

Conread position: 105-395
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 208, 18

Conread position: 108-478
Cow position:
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 120

Conread position: 112-282
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 105, 12

Conread position: 115-449
Cow position:
Alignm length: 349
Alignm identity: 230
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 157

Conread position: 121-415
Cow position:
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 28

Conread position: 121-475
Cow position:
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 123

Conread position: 122-317
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 157

Conread position: 122-479
Cow position:
Alignm length: 366
Alignm identity: 230
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 193, 72

Conread position: 123-413
Cow position:
Alignm length: 299
Alignm identity: 217
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 34, 159

Conread position: 125-410
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 69, 145

Conread position: 134-303
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 136

Conread position: 140-314
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 82, 35

Conread position: 140-455
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 77, 21

Conread position: 141-412
Cow position:
Alignm length: 280
Alignm identity: 185
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 114

Conread position: 142-477
Cow position:
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 130

Conread position: 143-486
Cow position:
Alignm length: 361
Alignm identity: 240
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 21, 50

Conread position: 150-449
Cow position:
Alignm length: 308
Alignm identity: 202
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 72

Conread position: 153-275
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 161-332
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 35

Conread position: 163-352
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 118

Conread position: 165-406
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 102

Conread position: 166-298
Cow position:
Alignm length: 138
Alignm identity: 114
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 53, 111

Conread position: 172-478
Cow position:
Alignm length: 317
Alignm identity: 207
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 101

Conread position: 175-301
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 47, 26

Conread position: 187-293
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 191-476
Cow position:
Alignm length: 307
Alignm identity: 212
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 31, 72

Conread position: 206-478
Cow position:
Alignm length: 280
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 201, 13

Conread position: 209-476
Cow position:
Alignm length: 277
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 110, 11

Conread position: 217-477
Cow position:
Alignm length: 268
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 61, 77

Conread position: 218-450
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 137, 63

Conread position: 221-477
Cow position:
Alignm length: 266
Alignm identity: 180
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 104

Conread position: 229-438
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 181, 63

Conread position: 264-476
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 71, 13

Conread position: 266-475
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 151, 11

Conread position: 274-478
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 129

Conread position: 277-477
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 117, 0

Conread position: 279-473
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 138, 109

Show alignments to all cow chromosomes.