Cow genome map
| Conread name: | Pla1-C0000038_D23 |
| Conread position: | 1-247 |
| Cow position: | chr21:4189606-4189846 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 185, 25 |
| Conread position: | 1-268 |
| Cow position: | chr21:393793-394050 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 1-269 |
| Cow position: | chr21:24765044-24765321 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 131 |
| Conread position: | 1-275 |
| Cow position: | chr21:12973485-12973209 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 18 |
| Conread position: | 1-276 |
| Cow position: | chr21:13410051-13409786 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 1-281 |
| Cow position: | chr21:9278140-9278422 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 123, 25 |
| Conread position: | 1-282 |
| Cow position: | chr21:41957402-41957133 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 71, 26 |
| Conread position: | 1-332 |
| Cow position: | chr21:9416014-9416342 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 1-352 |
| Cow position: | chr21:33729205-33729546 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 1-354 |
| Cow position: | chr21:28998135-28997784 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 26 |
| Conread position: | 1-409 |
| Cow position: | chr21:45915932-45915546 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 1-410 |
| Cow position: | chr21:16166861-16166467 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 285 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 1-412 |
| Cow position: | chr21:4399572-4399980 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 1-412 |
| Cow position: | chr21:29069556-29069149 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 281 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 204, 26 |
| Conread position: | 1-415 |
| Cow position: | chr21:24698254-24698660 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 1-477 |
| Cow position: | chr21:23785800-23786273 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 25 |
| Conread position: | 5-313 |
| Cow position: | chr21:29942777-29943077 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 5-347 |
| Cow position: | chr21:24864931-24865267 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 6-477 |
| Cow position: | chr21:33947473-33947007 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 45 |
| Conread position: | 9-311 |
| Cow position: | chr21:8932097-8931818 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 10-282 |
| Cow position: | chr21:37361697-37361427 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 10-476 |
| Cow position: | chr21:46242464-46241993 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 12-279 |
| Cow position: | chr21:29248068-29247819 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 97, 33 |
| Conread position: | 19-263 |
| Cow position: | chr21:24669197-24669422 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 19-267 |
| Cow position: | chr21:8618059-8618307 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 19-294 |
| Cow position: | chr21:5425764-5426030 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 19-322 |
| Cow position: | chr21:29484769-29485064 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 31 |
| Conread position: | 19-395 |
| Cow position: | chr21:37845967-37845603 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 175 |
| Conread position: | 21-292 |
| Cow position: | chr21:28944579-28944311 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 21-334 |
| Cow position: | chr21:12801961-12801655 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 184, 51 |
| Conread position: | 21-340 |
| Cow position: | chr21:7156538-7156867 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 36, 32 |
| Conread position: | 22-469 |
| Cow position: | chr21:18378633-18379083 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 29 |
| Conread position: | 28-444 |
| Cow position: | chr21:35996961-35997387 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 29-305 |
| Cow position: | chr21:27743537-27743814 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 29-315 |
| Cow position: | chr21:32665977-32665700 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 217 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 29-333 |
| Cow position: | chr21:17674441-17674140 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 29-387 |
| Cow position: | chr21:35061879-35062234 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 29-397 |
| Cow position: | chr21:45330817-45330445 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 29-480 |
| Cow position: | chr21:23586665-23587142 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 242 |
| Conread position: | 30-279 |
| Cow position: | chr21:33983014-33982764 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 30-283 |
| Cow position: | chr21:25127404-25127646 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 30-322 |
| Cow position: | chr21:8985345-8985634 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 30-327 |
| Cow position: | chr21:23192722-23192425 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 30-387 |
| Cow position: | chr21:39401396-39401742 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 175, 18 |
| Conread position: | 30-414 |
| Cow position: | chr21:31662256-31662646 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 31-279 |
| Cow position: | chr21:44331488-44331254 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 114, 20 |
| Conread position: | 31-470 |
| Cow position: | chr21:34739646-34740086 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 19 |
| Conread position: | 32-308 |
| Cow position: | chr21:7564524-7564247 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 22 |
| Conread position: | 33-333 |
| Cow position: | chr21:30150471-30150170 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 21 |
| Conread position: | 33-413 |
| Cow position: | chr21:23478920-23478554 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 33-414 |
| Cow position: | chr21:27229996-27229616 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 33-475 |
| Cow position: | chr21:4098674-4099112 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 33-476 |
| Cow position: | chr21:44754981-44754542 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 38-328 |
| Cow position: | chr21:42135820-42135528 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 39-477 |
| Cow position: | chr21:31576317-31576736 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 14 |
| Conread position: | 41-254 |
| Cow position: | chr21:24714455-24714674 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 12, 36 |
| Conread position: | 41-480 |
| Cow position: | chr21:18942026-18941583 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 62 |
| Conread position: | 42-269 |
| Cow position: | chr21:48484638-48484415 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 42-317 |
| Cow position: | chr21:20426339-20426607 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 11 |
| Conread position: | 42-477 |
| Cow position: | chr21:33997419-33996983 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 85 |
| Conread position: | 52-268 |
| Cow position: | chr21:26645837-26645625 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 94, 71 |
| Conread position: | 52-279 |
| Cow position: | chr21:18494780-18495013 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 73, 83 |
| Conread position: | 52-300 |
| Cow position: | chr21:8289827-8289570 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 52-300 |
| Cow position: | chr21:31764322-31764070 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 52-305 |
| Cow position: | chr21:23449387-23449640 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 18, 73 |
| Conread position: | 52-306 |
| Cow position: | chr21:42459733-42459470 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 52-327 |
| Cow position: | chr21:32559540-32559278 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 52-329 |
| Cow position: | chr21:6102455-6102172 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 23, 227 |
| Conread position: | 52-354 |
| Cow position: | chr21:28993812-28993503 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 52-382 |
| Cow position: | chr21:5426760-5427087 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 143, 18 |
| Conread position: | 52-386 |
| Cow position: | chr21:1591365-1591705 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 112, 20 |
| Conread position: | 52-395 |
| Cow position: | chr21:23500007-23499668 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 20 |
| Conread position: | 52-396 |
| Cow position: | chr21:47465307-47464958 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 52-412 |
| Cow position: | chr21:36795416-36795780 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 52-412 |
| Cow position: | chr21:42053451-42053103 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 52-413 |
| Cow position: | chr21:13365155-13365520 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 52-414 |
| Cow position: | chr21:46849309-46848949 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 73 |
| Conread position: | 52-415 |
| Cow position: | chr21:34565399-34565035 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 172 |
| Conread position: | 52-432 |
| Cow position: | chr21:38449638-38449251 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 20, 73 |
| Conread position: | 52-446 |
| Cow position: | chr21:41974565-41974167 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 20, 74 |
| Conread position: | 52-474 |
| Cow position: | chr21:23801307-23800888 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 70 |
| Conread position: | 52-475 |
| Cow position: | chr21:25286323-25286760 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 52-476 |
| Cow position: | chr21:15742277-15741837 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 67 |
| Conread position: | 52-479 |
| Cow position: | chr21:9353254-9353698 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 145 |
| Conread position: | 52-480 |
| Cow position: | chr21:48291218-48290807 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 39 |
| Conread position: | 53-479 |
| Cow position: | chr21:4723294-4723731 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 54-352 |
| Cow position: | chr21:28190844-28191148 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 54-477 |
| Cow position: | chr21:44093595-44094011 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 71 |
| Conread position: | 55-266 |
| Cow position: | chr21:46912361-46912569 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 55-326 |
| Cow position: | chr21:13898008-13898274 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 130, 17 |
| Conread position: | 55-327 |
| Cow position: | chr21:22860819-22861089 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 150, 69 |
| Conread position: | 55-388 |
| Cow position: | chr21:39765666-39765988 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 56-473 |
| Cow position: | chr21:33727643-33727217 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 57-419 |
| Cow position: | chr21:15610974-15611322 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 299, 15 |
| Conread position: | 57-462 |
| Cow position: | chr21:12087413-12087829 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 18 |
| Conread position: | 60-387 |
| Cow position: | chr21:8235722-8235410 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 131, 64 |
| Conread position: | 67-479 |
| Cow position: | chr21:25800238-25800646 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 12 |
| Conread position: | 69-270 |
| Cow position: | chr21:10000912-10001108 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 119, 39 |
| Conread position: | 75-305 |
| Cow position: | chr21:36793730-36793960 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 101, 45 |
| Conread position: | 82-332 |
| Cow position: | chr21:13840167-13840419 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 77, 34 |
| Conread position: | 85-275 |
| Cow position: | chr21:8187666-8187466 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 87-477 |
| Cow position: | chr21:6316050-6316458 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 372 |
| Conread position: | 94-263 |
| Cow position: | chr21:7825319-7825152 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 29 |
| Conread position: | 94-476 |
| Cow position: | chr21:6058783-6058402 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 73, 29 |
| Conread position: | 97-256 |
| Cow position: | chr21:40312942-40312781 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 99-332 |
| Cow position: | chr21:12462109-12461875 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 99-409 |
| Cow position: | chr21:41583131-41583443 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 27 |
| Conread position: | 100-315 |
| Cow position: | chr21:33391925-33392134 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 100-449 |
| Cow position: | chr21:20152810-20153168 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 88, 24 |
| Conread position: | 102-423 |
| Cow position: | chr21:11521185-11520880 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 102-477 |
| Cow position: | chr21:20418825-20418439 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 105-333 |
| Cow position: | chr21:20575596-20575382 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 105-396 |
| Cow position: | chr21:37886278-37886564 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 118-474 |
| Cow position: | chr21:21181055-21181422 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 104, 163 |
| Conread position: | 120-317 |
| Cow position: | chr21:4568166-4568362 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 92, 145 |
| Conread position: | 121-315 |
| Cow position: | chr21:2412642-2412838 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 121-477 |
| Cow position: | chr21:11676161-11675805 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 14 |
| Conread position: | 121-479 |
| Cow position: | chr21:45923761-45923415 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 11 |
| Conread position: | 122-348 |
| Cow position: | chr21:6621441-6621211 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 21, 158 |
| Conread position: | 122-477 |
| Cow position: | chr21:12301621-12301263 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 51 |
| Conread position: | 125-479 |
| Cow position: | chr21:32574604-32574972 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 91, 155 |
| Conread position: | 127-282 |
| Cow position: | chr21:17856436-17856586 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 137-406 |
| Cow position: | chr21:32904257-32903984 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 54, 87 |
| Conread position: | 140-475 |
| Cow position: | chr21:31200074-31200401 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 71, 135 |
| Conread position: | 140-480 |
| Cow position: | chr21:49649535-49649867 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 81 |
| Conread position: | 141-477 |
| Cow position: | chr21:8206674-8207024 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 58, 69 |
| Conread position: | 141-477 |
| Cow position: | chr21:41514706-41515042 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 44 |
| Conread position: | 143-412 |
| Cow position: | chr21:30835266-30835540 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 44, 83 |
| Conread position: | 143-422 |
| Cow position: | chr21:29978852-29978570 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 190, 77 |
| Conread position: | 144-478 |
| Cow position: | chr21:9940289-9939942 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 66, 126 |
| Conread position: | 145-245 |
| Cow position: | chr21:22121428-22121526 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 150-417 |
| Cow position: | chr21:22210333-22210066 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 157-392 |
| Cow position: | chr21:6652878-6652645 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 164, 63 |
| Conread position: | 161-477 |
| Cow position: | chr21:31661927-31662247 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 163-352 |
| Cow position: | chr21:2057117-2056935 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 24, 104 |
| Conread position: | 175-477 |
| Cow position: | chr21:47715608-47715297 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 179-469 |
| Cow position: | chr21:15239224-15239517 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 179-478 |
| Cow position: | chr21:31004719-31004425 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 198, 17 |
| Conread position: | 180-311 |
| Cow position: | chr21:37121291-37121160 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-479 |
| Cow position: | chr21:23397904-23397603 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 149, 26 |
| Conread position: | 187-310 |
| Cow position: | chr21:24703625-24703748 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 110 |
| Conread position: | 194-472 |
| Cow position: | chr21:36371441-36371723 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 13, 85 |
| Conread position: | 205-475 |
| Cow position: | chr21:8420591-8420864 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 114, 153 |
| Conread position: | 206-379 |
| Cow position: | chr21:38774155-38774333 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 15 |
| Conread position: | 209-482 |
| Cow position: | chr21:39509415-39509136 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 125, 11 |
| Conread position: | 211-439 |
| Cow position: | chr21:37718470-37718239 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 206, 63 |
| Conread position: | 211-446 |
| Cow position: | chr21:8184256-8184491 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 216-475 |
| Cow position: | chr21:11019364-11019626 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 229-352 |
| Cow position: | chr21:44764441-44764323 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 277-476 |
| Cow position: | chr21:8671434-8671638 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 51, 91 |
| Conread position: | 286-477 |
| Cow position: | chr21:8282322-8282511 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 131, 15 |
| Conread position: | 291-444 |
| Cow position: | chr21:18782290-18782446 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 122, 20 |
| Conread position: | 295-477 |
| Cow position: | chr21:37121149-37120963 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 122, 9 |
| Conread position: | 303-488 |
| Cow position: | chr21:17807070-17806881 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 114, 142 |
Show alignments to all cow chromosomes.