Cow genome map

Conread name: Pla1-C0000038_D23

Conread position: 1-279
Cow position: chr25:13333129-13333401 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 140, 26

Conread position: 1-442
Cow position: chr25:10012351-10011912 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 24

Conread position: 1-467
Cow position: chr25:20625223-20624765 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 20

Conread position: 1-477
Cow position: chr25:14570072-14570548 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 29

Conread position: 6-474
Cow position: chr25:29215680-29215226 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 45

Conread position: 12-477
Cow position: chr25:20076207-20076680 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 9

Conread position: 13-397
Cow position: chr25:25866642-25866999 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 259
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 39

Conread position: 14-329
Cow position: chr25:5837251-5836934 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 58, 11

Conread position: 17-271
Cow position: chr25:38357815-38358067 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 23, 112

Conread position: 19-153
Cow position: chr25:13443881-13443752 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 30

Conread position: 19-332
Cow position: chr25:17566301-17566613 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 107

Conread position: 19-332
Cow position: chr25:40321575-40321261 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 13, 33

Conread position: 19-413
Cow position: chr25:27535189-27534807 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 277
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 34

Conread position: 20-281
Cow position: chr25:26757159-26757418 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 29

Conread position: 21-476
Cow position: chr25:18293474-18293909 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 302
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 36, 25

Conread position: 21-476
Cow position: chr25:24406019-24405552 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 104

Conread position: 22-478
Cow position: chr25:8512369-8511909 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 28

Conread position: 23-386
Cow position: chr25:38135470-38135835 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 27

Conread position: 28-457
Cow position: chr25:20785855-20785432 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 290
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 177, 19

Conread position: 29-258
Cow position: chr25:12824290-12824064 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 24, 97

Conread position: 30-268
Cow position: chr25:12204200-12204435 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 41, 21

Conread position: 30-282
Cow position: chr25:8347239-8347487 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 42, 20

Conread position: 30-328
Cow position: chr25:36761836-36762127 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 21

Conread position: 30-389
Cow position: chr25:22297287-22296938 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 43, 21

Conread position: 30-476
Cow position: chr25:26654637-26655092 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 308
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 105, 20

Conread position: 31-415
Cow position: chr25:22910113-22909747 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 19

Conread position: 33-354
Cow position: chr25:36081604-36081927 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 91, 10

Conread position: 33-439
Cow position: chr25:27504452-27504055 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 30

Conread position: 34-270
Cow position: chr25:2126203-2126433 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 33, 17

Conread position: 37-238
Cow position: chr25:15254599-15254397 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 89

Conread position: 38-280
Cow position: chr25:33142177-33141931 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 187

Conread position: 46-329
Cow position: chr25:12239398-12239124 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 7, 38

Conread position: 47-270
Cow position: chr25:4002539-4002768 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 25, 73

Conread position: 47-282
Cow position: chr25:24669687-24669457 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 166, 77

Conread position: 48-477
Cow position: chr25:22575774-22575347 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 24

Conread position: 51-470
Cow position: chr25:23410410-23410834 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 73

Conread position: 52-232
Cow position: chr25:33260488-33260667 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 76

Conread position: 52-278
Cow position: chr25:16001773-16001550 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 20, 74

Conread position: 52-282
Cow position: chr25:7306046-7306281 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 74

Conread position: 52-312
Cow position: chr25:37687412-37687167 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 18, 32

Conread position: 52-329
Cow position: chr25:14791500-14791780 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 20, 73

Conread position: 52-333
Cow position: chr25:36535684-36535406 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 138, 20

Conread position: 52-352
Cow position: chr25:788017-788309 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 15, 51

Conread position: 52-396
Cow position: chr25:20496288-20496633 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 17, 71

Conread position: 52-412
Cow position: chr25:13569419-13569065 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 73

Conread position: 52-412
Cow position: chr25:28188200-28187834 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 106, 72

Conread position: 52-413
Cow position: chr25:10748754-10748389 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 46

Conread position: 52-413
Cow position: chr25:18161051-18161394 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 19

Conread position: 52-414
Cow position: chr25:33691302-33691661 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 73

Conread position: 52-432
Cow position: chr25:25961712-25962073 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 72

Conread position: 52-439
Cow position: chr25:14467334-14466953 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 18

Conread position: 52-473
Cow position: chr25:11437054-11436627 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 289
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 15, 73

Conread position: 52-477
Cow position: chr25:9055944-9056356 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 277
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 21

Conread position: 53-247
Cow position: chr25:36746696-36746504 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 84, 59

Conread position: 53-327
Cow position: chr25:6683312-6683041 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 70

Conread position: 53-340
Cow position: chr25:12235009-12234727 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 71

Conread position: 54-277
Cow position: chr25:32191421-32191643 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 19, 41

Conread position: 54-313
Cow position: chr25:8918528-8918269 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 165

Conread position: 54-479
Cow position: chr25:34970229-34970639 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 58

Conread position: 55-327
Cow position: chr25:20211335-20211059 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 174

Conread position: 56-306
Cow position: chr25:395107-395354 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 15, 57

Conread position: 58-332
Cow position: chr25:7641699-7641425 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 22

Conread position: 60-330
Cow position: chr25:2136108-2136383 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 116, 67

Conread position: 60-332
Cow position: chr25:1735560-1735294 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 65

Conread position: 60-475
Cow position: chr25:40957230-40956807 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 48

Conread position: 66-329
Cow position: chr25:8560632-8560892 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 38

Conread position: 66-329
Cow position: chr25:15377096-15377350 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 66-469
Cow position: chr25:8576456-8576867 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 57

Conread position: 73-282
Cow position: chr25:36033206-36033416 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 61, 90

Conread position: 73-348
Cow position: chr25:17365487-17365212 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 150, 48

Conread position: 101-477
Cow position: chr25:33245731-33246095 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 21

Conread position: 117-329
Cow position: chr25:12755680-12755464 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 6, 16

Conread position: 124-477
Cow position: chr25:26457865-26457495 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 34

Conread position: 125-415
Cow position: chr25:32606506-32606212 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 32, 148

Conread position: 126-354
Cow position: chr25:36644127-36643908 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 35, 6

Conread position: 126-417
Cow position: chr25:5972295-5972572 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 127-332
Cow position: chr25:13272396-13272595 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 132-329
Cow position: chr25:16555589-16555789 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 95

Conread position: 132-391
Cow position: chr25:17144254-17144511 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 74, 22

Conread position: 132-395
Cow position: chr25:13472063-13471808 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 163, 121

Conread position: 132-415
Cow position: chr25:11989687-11989400 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 78, 148

Conread position: 137-415
Cow position: chr25:33411090-33411371 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 74, 54

Conread position: 140-395
Cow position: chr25:16560338-16560080 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 28

Conread position: 141-375
Cow position: chr25:33786245-33786015 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 176, 65

Conread position: 144-477
Cow position: chr25:34379265-34378914 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 28

Conread position: 149-375
Cow position: chr25:22180159-22179937 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 128, 45

Conread position: 153-473
Cow position: chr25:36501390-36501062 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 120

Conread position: 165-415
Cow position: chr25:16691523-16691770 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 51, 115

Conread position: 167-475
Cow position: chr25:33112106-33111803 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 94

Conread position: 169-386
Cow position: chr25:9519189-9519404 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 56, 25

Conread position: 181-478
Cow position: chr25:26240418-26240722 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 158, 38

Conread position: 182-477
Cow position: chr25:12932507-12932807 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 76

Conread position: 190-477
Cow position: chr25:14075187-14075485 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 57

Conread position: 199-396
Cow position: chr25:13727486-13727293 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 200-333
Cow position: chr25:107186-107056 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 23

Conread position: 202-450
Cow position: chr25:8080619-8080881 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 73

Conread position: 206-464
Cow position: chr25:22542899-22542656 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 152, 68

Conread position: 210-414
Cow position: chr25:33205171-33204970 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 119, 10

Conread position: 221-455
Cow position: chr25:20811453-20811215 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 52

Conread position: 234-415
Cow position: chr25:15358430-15358254 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 258-475
Cow position: chr25:6177987-6178214 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 13

Conread position: 261-473
Cow position: chr25:30021030-30021251 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 156, 13

Show alignments to all cow chromosomes.