Cow genome map

Conread name: Pla1-C0000038_D23

Conread position: 1-270
Cow position:
Alignm length: 275
Alignm identity: 201
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 81, 40

Conread position: 1-321
Cow position:
Alignm length: 325
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 156, 26

Conread position: 1-329
Cow position:
Alignm length: 336
Alignm identity: 234
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 25, 44

Conread position: 1-359
Cow position:
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 60

Conread position: 1-396
Cow position:
Alignm length: 401
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 25

Conread position: 1-412
Cow position:
Alignm length: 425
Alignm identity: 286
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 166, 14

Conread position: 1-432
Cow position:
Alignm length: 446
Alignm identity: 296
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 96, 26

Conread position: 6-329
Cow position:
Alignm length: 335
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 108, 45

Conread position: 10-476
Cow position:
Alignm length: 488
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 42

Conread position: 15-418
Cow position:
Alignm length: 418
Alignm identity: 272
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 19

Conread position: 18-270
Cow position:
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 32

Conread position: 18-327
Cow position:
Alignm length: 320
Alignm identity: 222
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 54, 117

Conread position: 18-352
Cow position:
Alignm length: 347
Alignm identity: 233
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 17, 9

Conread position: 21-279
Cow position:
Alignm length: 265
Alignm identity: 190
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 63, 51

Conread position: 21-415
Cow position:
Alignm length: 404
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 29

Conread position: 22-313
Cow position:
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 28

Conread position: 25-412
Cow position:
Alignm length: 406
Alignm identity: 281
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 115, 28

Conread position: 26-388
Cow position:
Alignm length: 367
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 24

Conread position: 27-475
Cow position:
Alignm length: 465
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 29-262
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 22

Conread position: 29-332
Cow position:
Alignm length: 310
Alignm identity: 210
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 23

Conread position: 29-415
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 22

Conread position: 29-472
Cow position:
Alignm length: 458
Alignm identity: 309
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 133, 22

Conread position: 29-477
Cow position:
Alignm length: 462
Alignm identity: 298
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 108, 21

Conread position: 30-265
Cow position:
Alignm length: 238
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 166, 23

Conread position: 30-266
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 179, 21

Conread position: 30-275
Cow position:
Alignm length: 247
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 229, 20

Conread position: 30-276
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 125, 20

Conread position: 30-280
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 36, 20

Conread position: 30-281
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 20

Conread position: 30-282
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 20

Conread position: 30-283
Cow position:
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 20

Conread position: 30-305
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 18

Conread position: 30-305
Cow position:
Alignm length: 282
Alignm identity: 210
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 128, 21

Conread position: 30-327
Cow position:
Alignm length: 301
Alignm identity: 199
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 195, 19

Conread position: 30-332
Cow position:
Alignm length: 308
Alignm identity: 216
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 13

Conread position: 30-369
Cow position:
Alignm length: 345
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 20

Conread position: 30-396
Cow position:
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 21

Conread position: 30-411
Cow position:
Alignm length: 392
Alignm identity: 259
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 126, 20

Conread position: 30-413
Cow position:
Alignm length: 392
Alignm identity: 268
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 180, 21

Conread position: 30-477
Cow position:
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 22

Conread position: 32-352
Cow position:
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 18

Conread position: 33-444
Cow position:
Alignm length: 422
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 17

Conread position: 45-304
Cow position:
Alignm length: 262
Alignm identity: 190
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 27, 51

Conread position: 52-280
Cow position:
Alignm length: 230
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 73

Conread position: 52-282
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 20, 73

Conread position: 52-302
Cow position:
Alignm length: 255
Alignm identity: 168
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 82

Conread position: 52-305
Cow position:
Alignm length: 263
Alignm identity: 182
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 73

Conread position: 52-313
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 20, 74

Conread position: 52-327
Cow position:
Alignm length: 281
Alignm identity: 198
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 20, 73

Conread position: 52-329
Cow position:
Alignm length: 280
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 106, 50

Conread position: 52-329
Cow position:
Alignm length: 285
Alignm identity: 195
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 15, 127

Conread position: 52-334
Cow position:
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 71

Conread position: 52-361
Cow position:
Alignm length: 320
Alignm identity: 212
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 12

Conread position: 52-375
Cow position:
Alignm length: 326
Alignm identity: 220
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 16, 73

Conread position: 52-397
Cow position:
Alignm length: 357
Alignm identity: 247
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 73

Conread position: 52-416
Cow position:
Alignm length: 370
Alignm identity: 245
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 159, 47

Conread position: 52-462
Cow position:
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 74

Conread position: 52-463
Cow position:
Alignm length: 425
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 31

Conread position: 52-463
Cow position:
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 72

Conread position: 52-476
Cow position:
Alignm length: 434
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 11

Conread position: 52-477
Cow position:
Alignm length: 447
Alignm identity: 302
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 13, 73

Conread position: 53-332
Cow position:
Alignm length: 286
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 87, 7

Conread position: 54-372
Cow position:
Alignm length: 330
Alignm identity: 222
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 19, 71

Conread position: 55-322
Cow position:
Alignm length: 272
Alignm identity: 181
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 92, 45

Conread position: 55-329
Cow position:
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 69

Conread position: 56-476
Cow position:
Alignm length: 438
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 68

Conread position: 59-282
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 165

Conread position: 59-477
Cow position:
Alignm length: 437
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 65

Conread position: 60-275
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 12, 66

Conread position: 60-275
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 59, 12

Conread position: 65-271
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 87, 60

Conread position: 66-389
Cow position:
Alignm length: 330
Alignm identity: 234
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 58

Conread position: 66-413
Cow position:
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 57

Conread position: 68-415
Cow position:
Alignm length: 353
Alignm identity: 246
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 251, 55

Conread position: 70-274
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 24

Conread position: 72-406
Cow position:
Alignm length: 345
Alignm identity: 230
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 85, 48

Conread position: 75-265
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 115, 49

Conread position: 75-479
Cow position:
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 8

Conread position: 76-217
Cow position:
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 47

Conread position: 81-396
Cow position:
Alignm length: 325
Alignm identity: 224
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 64, 43

Conread position: 96-477
Cow position:
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 41

Conread position: 122-302
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 148

Conread position: 126-333
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 127-475
Cow position:
Alignm length: 362
Alignm identity: 252
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 202, 75

Conread position: 127-475
Cow position:
Alignm length: 361
Alignm identity: 243
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 97, 22

Conread position: 128-475
Cow position:
Alignm length: 361
Alignm identity: 232
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 24

Conread position: 132-410
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 71

Conread position: 137-277
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 55

Conread position: 140-353
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 80, 111

Conread position: 145-327
Cow position:
Alignm length: 186
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 130

Conread position: 145-332
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 80

Conread position: 147-472
Cow position:
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 159-475
Cow position:
Alignm length: 329
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 172-477
Cow position:
Alignm length: 314
Alignm identity: 220
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 23

Conread position: 179-415
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 12

Conread position: 180-468
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 180, 36

Conread position: 189-476
Cow position:
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 35

Conread position: 190-479
Cow position:
Alignm length: 298
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 6

Conread position: 191-463
Cow position:
Alignm length: 287
Alignm identity: 200
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 98

Conread position: 199-474
Cow position:
Alignm length: 287
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 129, 22

Conread position: 209-478
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 75

Conread position: 217-475
Cow position:
Alignm length: 270
Alignm identity: 194
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 100, 178

Conread position: 218-396
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 46, 26

Conread position: 226-477
Cow position:
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 103, 140

Conread position: 252-475
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 161, 19

Conread position: 277-477
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 176

Show alignments to all cow chromosomes.