Cow genome map

Conread name: Pla1-C0000038_D23

Conread position: 1-282
Cow position:
Alignm length: 288
Alignm identity: 201
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 154, 24

Conread position: 1-282
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 52

Conread position: 1-317
Cow position:
Alignm length: 320
Alignm identity: 226
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 70, 25

Conread position: 1-332
Cow position:
Alignm length: 342
Alignm identity: 239
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 179, 25

Conread position: 1-352
Cow position:
Alignm length: 358
Alignm identity: 240
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 212, 29

Conread position: 1-415
Cow position:
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 26

Conread position: 1-421
Cow position:
Alignm length: 435
Alignm identity: 282
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 25, 55

Conread position: 1-434
Cow position:
Alignm length: 450
Alignm identity: 302
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 144, 25

Conread position: 1-462
Cow position:
Alignm length: 474
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 26

Conread position: 5-262
Cow position:
Alignm length: 262
Alignm identity: 185
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 21, 48

Conread position: 9-264
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 43

Conread position: 14-397
Cow position:
Alignm length: 396
Alignm identity: 266
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 43, 61

Conread position: 14-404
Cow position:
Alignm length: 408
Alignm identity: 280
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 84, 49

Conread position: 14-414
Cow position:
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 36

Conread position: 18-332
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 174, 5

Conread position: 19-265
Cow position:
Alignm length: 258
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 31

Conread position: 19-277
Cow position:
Alignm length: 260
Alignm identity: 190
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 83, 22

Conread position: 19-306
Cow position:
Alignm length: 288
Alignm identity: 218
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 19-396
Cow position:
Alignm length: 386
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 32

Conread position: 19-415
Cow position:
Alignm length: 408
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 34

Conread position: 19-475
Cow position:
Alignm length: 491
Alignm identity: 325
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 24, 120

Conread position: 21-416
Cow position:
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 29

Conread position: 21-443
Cow position:
Alignm length: 431
Alignm identity: 292
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 29

Conread position: 21-449
Cow position:
Alignm length: 439
Alignm identity: 293
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 150, 27

Conread position: 21-450
Cow position:
Alignm length: 441
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 101

Conread position: 21-475
Cow position:
Alignm length: 461
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 103

Conread position: 21-479
Cow position:
Alignm length: 469
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 29

Conread position: 28-439
Cow position:
Alignm length: 429
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 97

Conread position: 28-476
Cow position:
Alignm length: 460
Alignm identity: 301
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 42, 18

Conread position: 29-275
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 83

Conread position: 29-306
Cow position:
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 29-332
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 21

Conread position: 30-319
Cow position:
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 111, 23

Conread position: 30-334
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 20

Conread position: 30-352
Cow position:
Alignm length: 332
Alignm identity: 221
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 21

Conread position: 30-443
Cow position:
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 20

Conread position: 30-477
Cow position:
Alignm length: 461
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 31-261
Cow position:
Alignm length: 235
Alignm identity: 180
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 19

Conread position: 32-253
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 108, 18

Conread position: 33-387
Cow position:
Alignm length: 362
Alignm identity: 238
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 17

Conread position: 34-272
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 16

Conread position: 34-413
Cow position:
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 16

Conread position: 37-413
Cow position:
Alignm length: 396
Alignm identity: 265
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 14

Conread position: 41-315
Cow position:
Alignm length: 288
Alignm identity: 197
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 10

Conread position: 43-467
Cow position:
Alignm length: 449
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 12

Conread position: 49-472
Cow position:
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 75

Conread position: 50-477
Cow position:
Alignm length: 436
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 60

Conread position: 51-291
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 21, 75

Conread position: 52-267
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 173, 26

Conread position: 52-269
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 20

Conread position: 52-282
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 73

Conread position: 52-294
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 74

Conread position: 52-309
Cow position:
Alignm length: 261
Alignm identity: 185
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 15, 35

Conread position: 52-327
Cow position:
Alignm length: 279
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 75

Conread position: 52-401
Cow position:
Alignm length: 366
Alignm identity: 257
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 20, 5

Conread position: 52-408
Cow position:
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 21

Conread position: 52-414
Cow position:
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 73

Conread position: 52-414
Cow position:
Alignm length: 368
Alignm identity: 249
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 51

Conread position: 52-459
Cow position:
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 20

Conread position: 52-475
Cow position:
Alignm length: 441
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 48

Conread position: 52-477
Cow position:
Alignm length: 429
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 71

Conread position: 52-480
Cow position:
Alignm length: 444
Alignm identity: 305
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 20, 8

Conread position: 54-477
Cow position:
Alignm length: 441
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 41

Conread position: 55-272
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 69

Conread position: 55-276
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 14, 36

Conread position: 55-477
Cow position:
Alignm length: 454
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 32

Conread position: 55-479
Cow position:
Alignm length: 447
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 69

Conread position: 56-329
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 178

Conread position: 56-386
Cow position:
Alignm length: 341
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 61

Conread position: 56-464
Cow position:
Alignm length: 422
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 67

Conread position: 57-385
Cow position:
Alignm length: 336
Alignm identity: 235
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 14, 67

Conread position: 60-332
Cow position:
Alignm length: 284
Alignm identity: 190
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 9, 65

Conread position: 60-411
Cow position:
Alignm length: 359
Alignm identity: 245
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 162, 12

Conread position: 60-412
Cow position:
Alignm length: 366
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 8, 66

Conread position: 60-473
Cow position:
Alignm length: 425
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 66

Conread position: 61-375
Cow position:
Alignm length: 320
Alignm identity: 213
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 115, 63

Conread position: 65-329
Cow position:
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 59

Conread position: 66-352
Cow position:
Alignm length: 290
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 139, 58

Conread position: 66-380
Cow position:
Alignm length: 321
Alignm identity: 215
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 58

Conread position: 66-474
Cow position:
Alignm length: 431
Alignm identity: 298
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 218, 53

Conread position: 67-375
Cow position:
Alignm length: 320
Alignm identity: 221
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 68

Conread position: 67-412
Cow position:
Alignm length: 354
Alignm identity: 229
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 57

Conread position: 82-329
Cow position:
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 127, 42

Conread position: 82-341
Cow position:
Alignm length: 281
Alignm identity: 189
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 86-278
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 130, 41

Conread position: 91-475
Cow position:
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 94-437
Cow position:
Alignm length: 361
Alignm identity: 249
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 24

Conread position: 102-476
Cow position:
Alignm length: 393
Alignm identity: 264
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 90, 21

Conread position: 117-415
Cow position:
Alignm length: 313
Alignm identity: 214
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 29, 285

Conread position: 120-352
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 23

Conread position: 125-327
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 98

Conread position: 125-386
Cow position:
Alignm length: 264
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 96

Conread position: 132-300
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 145

Conread position: 132-478
Cow position:
Alignm length: 355
Alignm identity: 230
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 198, 127

Conread position: 137-387
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 125

Conread position: 137-454
Cow position:
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 147

Conread position: 140-414
Cow position:
Alignm length: 281
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 21

Conread position: 140-414
Cow position:
Alignm length: 280
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 43

Conread position: 141-354
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 128

Conread position: 143-449
Cow position:
Alignm length: 312
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 137

Conread position: 145-396
Cow position:
Alignm length: 254
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 189, 39

Conread position: 145-491
Cow position:
Alignm length: 363
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 83

Conread position: 149-388
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 49

Conread position: 154-478
Cow position:
Alignm length: 334
Alignm identity: 224
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 54, 124

Conread position: 158-478
Cow position:
Alignm length: 333
Alignm identity: 233
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 54, 74

Conread position: 160-399
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 158, 42

Conread position: 161-476
Cow position:
Alignm length: 324
Alignm identity: 229
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 119, 7

Conread position: 165-475
Cow position:
Alignm length: 324
Alignm identity: 226
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 60, 118

Conread position: 177-444
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 147, 15

Conread position: 180-443
Cow position:
Alignm length: 274
Alignm identity: 200
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 39, 0

Conread position: 194-382
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 13, 23

Conread position: 194-477
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 31, 54

Conread position: 203-477
Cow position:
Alignm length: 284
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 131, 78

Conread position: 225-493
Cow position:
Alignm length: 282
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 106, 15

Conread position: 228-473
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 45

Conread position: 229-467
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 44, 49

Conread position: 230-450
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 186, 44

Conread position: 255-477
Cow position:
Alignm length: 231
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 162, 29

Conread position: 287-415
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 117

Conread position: 331-480
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 33

Show alignments to all cow chromosomes.