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Cow genome map

           
Conread name:
           
Pla1-C0000038_D23
        

               
Conread position:
               
1-181
               

               
Cow position:
               
chr4:10041730-10041908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:43543033-43542775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:11872211-11871939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr4:61399729-61399456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr4:24002268-24001949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr4:47773931-47773621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 25
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr4:27276842-27276438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr4:509197-508802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr4:51783861-51784286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
21, 136
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr4:61304723-61304306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr4:25906625-25906232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 17
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr4:6166626-6166137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
2-477
               

               
Cow position:
               
chr4:2121698-2121222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr4:5979080-5978890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr4:5999502-5999153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
4-354
               

               
Cow position:
               
chr4:37828133-37827802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
4-476
               

               
Cow position:
               
chr4:23494633-23495084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr4:18489688-18489425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr4:22850014-22849722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 120
               

               
Conread position:
               
5-327
               

               
Cow position:
               
chr4:37915624-37915320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
8-277
               

               
Cow position:
               
chr4:16239436-16239180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
9-477
               

               
Cow position:
               
chr4:24187914-24187425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 38
               

               
Conread position:
               
12-419
               

               
Cow position:
               
chr4:61624883-61624475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 39
               

               
Conread position:
               
12-477
               

               
Cow position:
               
chr4:10992494-10992024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
12-477
               

               
Cow position:
               
chr4:15623552-15624032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
13-329
               

               
Cow position:
               
chr4:44612707-44613022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
182, 111
               

               
Conread position:
               
17-282
               

               
Cow position:
               
chr4:45629-45894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
19-326
               

               
Cow position:
               
chr4:19744603-19744903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
19-378
               

               
Cow position:
               
chr4:45114892-45114537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
19-412
               

               
Cow position:
               
chr4:23066054-23065675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
19-471
               

               
Cow position:
               
chr4:52225725-52226174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
21-247
               

               
Cow position:
               
chr4:63349760-63349536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr4:9912444-9912748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
21-395
               

               
Cow position:
               
chr4:33030277-33030638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 27
               

               
Conread position:
               
21-414
               

               
Cow position:
               
chr4:36813088-36813485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
21-443
               

               
Cow position:
               
chr4:20279054-20279470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
21-461
               

               
Cow position:
               
chr4:22115322-22115766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
22-263
               

               
Cow position:
               
chr4:44073053-44072811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
22-459
               

               
Cow position:
               
chr4:48499565-48499976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 28
               

               
Conread position:
               
23-423
               

               
Cow position:
               
chr4:46083178-46082788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
25-415
               

               
Cow position:
               
chr4:7213865-7213490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 25
               

               
Conread position:
               
25-463
               

               
Cow position:
               
chr4:21365134-21365565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 25
               

               
Conread position:
               
25-487
               

               
Cow position:
               
chr4:12697368-12697818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 25
               

               
Conread position:
               
27-395
               

               
Cow position:
               
chr4:488717-488335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
29-329
               

               
Cow position:
               
chr4:43866127-43865839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
29-434
               

               
Cow position:
               
chr4:66548032-66547640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
29-475
               

               
Cow position:
               
chr4:45918755-45919208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
29-477
               

               
Cow position:
               
chr4:8692436-8692027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
29-477
               

               
Cow position:
               
chr4:22528663-22528211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 21
               

               
Conread position:
               
29-477
               

               
Cow position:
               
chr4:27997408-27997871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
30-265
               

               
Cow position:
               
chr4:42672896-42673131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
30-271
               

               
Cow position:
               
chr4:23853929-23854153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
30-276
               

               
Cow position:
               
chr4:20327990-20327742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
30-302
               

               
Cow position:
               
chr4:19265298-19265566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
30-327
               

               
Cow position:
               
chr4:16799467-16799170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
146, 23
               

               
Conread position:
               
30-327
               

               
Cow position:
               
chr4:51727808-51728093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
30-332
               

               
Cow position:
               
chr4:45662775-45662490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
30-333
               

               
Cow position:
               
chr4:44839160-44838870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
30-336
               

               
Cow position:
               
chr4:58512838-58512536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 20
               

               
Conread position:
               
30-415
               

               
Cow position:
               
chr4:9845649-9846021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 25
               

               
Conread position:
               
30-415
               

               
Cow position:
               
chr4:23382080-23381710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
30-467
               

               
Cow position:
               
chr4:65406635-65406210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 20
               

               
Conread position:
               
30-473
               

               
Cow position:
               
chr4:23311535-23311097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
30-477
               

               
Cow position:
               
chr4:28151254-28151705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
30-479
               

               
Cow position:
               
chr4:28377924-28377495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
404, 20
               

               
Conread position:
               
31-282
               

               
Cow position:
               
chr4:22215930-22215682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
31-322
               

               
Cow position:
               
chr4:66173071-66172785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
253, 19
               

               
Conread position:
               
31-327
               

               
Cow position:
               
chr4:48152643-48152355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
31-477
               

               
Cow position:
               
chr4:11021925-11021486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
32-414
               

               
Cow position:
               
chr4:242953-243338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
126, 12
               

               
Conread position:
               
32-467
               

               
Cow position:
               
chr4:19306983-19307421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
32-476
               

               
Cow position:
               
chr4:3440129-3440587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 94
               

               
Conread position:
               
33-282
               

               
Cow position:
               
chr4:19097020-19097259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
33-321
               

               
Cow position:
               
chr4:33433530-33433246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
173, 15
               

               
Conread position:
               
33-332
               

               
Cow position:
               
chr4:4321278-4320981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
33-352
               

               
Cow position:
               
chr4:44496112-44496418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
34-305
               

               
Cow position:
               
chr4:3475359-3475624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
34-305
               

               
Cow position:
               
chr4:52167118-52166857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
34-416
               

               
Cow position:
               
chr4:59833669-59834035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
44-461
               

               
Cow position:
               
chr4:5797701-5798125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
45-479
               

               
Cow position:
               
chr4:22249708-22249272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
47-375
               

               
Cow position:
               
chr4:47730600-47730927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
48-412
               

               
Cow position:
               
chr4:25879135-25879496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
51-422
               

               
Cow position:
               
chr4:45367478-45367855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
143, 21
               

               
Conread position:
               
52-262
               

               
Cow position:
               
chr4:26541474-26541694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
52-264
               

               
Cow position:
               
chr4:2422325-2422540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
52-271
               

               
Cow position:
               
chr4:14159381-14159163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
52-296
               

               
Cow position:
               
chr4:54501706-54501460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr4:19584447-19584710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr4:24198051-24197806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
217, 73
               

               
Conread position:
               
52-326
               

               
Cow position:
               
chr4:65919361-65919626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
163, 72
               

               
Conread position:
               
52-329
               

               
Cow position:
               
chr4:38181424-38181700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
52-332
               

               
Cow position:
               
chr4:11671195-11671473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
52-333
               

               
Cow position:
               
chr4:54190843-54191111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
158, 30
               

               
Conread position:
               
52-338
               

               
Cow position:
               
chr4:27561139-27561424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
52-352
               

               
Cow position:
               
chr4:28399664-28399372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
52-354
               

               
Cow position:
               
chr4:16339849-16339557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 71
               

               
Conread position:
               
52-386
               

               
Cow position:
               
chr4:23509331-23509673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
52-396
               

               
Cow position:
               
chr4:9168906-9168576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
52-412
               

               
Cow position:
               
chr4:23847308-23846946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
52-421
               

               
Cow position:
               
chr4:3850296-3850664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
99, 74
               

               
Conread position:
               
52-459
               

               
Cow position:
               
chr4:68795562-68795138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
52-470
               

               
Cow position:
               
chr4:31172409-31172842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
52-475
               

               
Cow position:
               
chr4:30131104-30131510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
52-475
               

               
Cow position:
               
chr4:54146732-54146301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
52-476
               

               
Cow position:
               
chr4:25972642-25973074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
52-477
               

               
Cow position:
               
chr4:49001558-49001134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
52-477
               

               
Cow position:
               
chr4:58707440-58706998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
127, 20
               

               
Conread position:
               
52-480
               

               
Cow position:
               
chr4:35471075-35471497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
52-489
               

               
Cow position:
               
chr4:65116468-65116009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
53-283
               

               
Cow position:
               
chr4:37470295-37470524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
53-316
               

               
Cow position:
               
chr4:10916093-10915836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
53-351
               

               
Cow position:
               
chr4:59333230-59332939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
53-477
               

               
Cow position:
               
chr4:18439829-18439399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
54-476
               

               
Cow position:
               
chr4:27372111-27371689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
55-300
               

               
Cow position:
               
chr4:50760374-50760133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
224, 20
               

               
Conread position:
               
55-305
               

               
Cow position:
               
chr4:49089540-49089785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
55-476
               

               
Cow position:
               
chr4:35869961-35870379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 70
               

               
Conread position:
               
59-270
               

               
Cow position:
               
chr4:53447916-53447704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
59-315
               

               
Cow position:
               
chr4:59565290-59565547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
59-413
               

               
Cow position:
               
chr4:21258970-21259319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 11
               

               
Conread position:
               
60-303
               

               
Cow position:
               
chr4:11099918-11099675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
60-413
               

               
Cow position:
               
chr4:65842011-65841661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
60-479
               

               
Cow position:
               
chr4:53752264-53752707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 12
               

               
Conread position:
               
64-477
               

               
Cow position:
               
chr4:21073393-21072978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 31
               

               
Conread position:
               
65-476
               

               
Cow position:
               
chr4:6208224-6208631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
66-329
               

               
Cow position:
               
chr4:11897541-11897277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
66-396
               

               
Cow position:
               
chr4:51408205-51407886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
313, 58
               

               
Conread position:
               
66-477
               

               
Cow position:
               
chr4:13406464-13406870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
67-299
               

               
Cow position:
               
chr4:8649999-8650220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
72-416
               

               
Cow position:
               
chr4:20090806-20090492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
73-256
               

               
Cow position:
               
chr4:25359376-25359558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
74-448
               

               
Cow position:
               
chr4:2601995-2602374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
78-311
               

               
Cow position:
               
chr4:46861822-46861593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 46
               

               
Conread position:
               
79-332
               

               
Cow position:
               
chr4:16762961-16762705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
81-485
               

               
Cow position:
               
chr4:36945419-36945009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 38
               

               
Conread position:
               
84-395
               

               
Cow position:
               
chr4:44973418-44973722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
121, 40
               

               
Conread position:
               
84-412
               

               
Cow position:
               
chr4:13222400-13222081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
94-318
               

               
Cow position:
               
chr4:36724828-36725048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 30
               

               
Conread position:
               
94-413
               

               
Cow position:
               
chr4:5554007-5553690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
96-395
               

               
Cow position:
               
chr4:61171691-61171987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
99-414
               

               
Cow position:
               
chr4:45952583-45952281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
99-479
               

               
Cow position:
               
chr4:39767136-39767529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
101-343
               

               
Cow position:
               
chr4:61231930-61231697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
101-412
               

               
Cow position:
               
chr4:40623303-40622996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
102-449
               

               
Cow position:
               
chr4:51768906-51769249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
104-471
               

               
Cow position:
               
chr4:58858367-58858007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
106-388
               

               
Cow position:
               
chr4:31634766-31634490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
116-386
               

               
Cow position:
               
chr4:10378918-10379191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
117-332
               

               
Cow position:
               
chr4:19408194-19407976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 37
               

               
Conread position:
               
117-352
               

               
Cow position:
               
chr4:38935164-38935404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
6, 35
               

               
Conread position:
               
117-404
               

               
Cow position:
               
chr4:36929119-36929407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
6, 163
               

               
Conread position:
               
119-340
               

               
Cow position:
               
chr4:21517196-21516973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
119-354
               

               
Cow position:
               
chr4:15784999-15784762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
120-258
               

               
Cow position:
               
chr4:6133781-6133922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
121-380
               

               
Cow position:
               
chr4:33666986-33667269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 128
               

               
Conread position:
               
122-352
               

               
Cow position:
               
chr4:35791287-35791073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
7, 103
               

               
Conread position:
               
126-272
               

               
Cow position:
               
chr4:59719449-59719599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
128-474
               

               
Cow position:
               
chr4:50769950-50769593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
139-417
               

               
Cow position:
               
chr4:65950477-65950764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
48, 137
               

               
Conread position:
               
140-352
               

               
Cow position:
               
chr4:41154474-41154689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
140-477
               

               
Cow position:
               
chr4:23758634-23758979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 177
               

               
Conread position:
               
141-395
               

               
Cow position:
               
chr4:9649830-9650092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
7, 199
               

               
Conread position:
               
142-305
               

               
Cow position:
               
chr4:66125252-66125407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 29
               

               
Conread position:
               
142-475
               

               
Cow position:
               
chr4:10837548-10837207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
65, 52
               

               
Conread position:
               
143-325
               

               
Cow position:
               
chr4:63418091-63417907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 124
               

               
Conread position:
               
145-449
               

               
Cow position:
               
chr4:19501249-19500948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
172, 75
               

               
Conread position:
               
146-328
               

               
Cow position:
               
chr4:63784286-63784103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 124
               

               
Conread position:
               
147-477
               

               
Cow position:
               
chr4:23166741-23167074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 191
               

               
Conread position:
               
150-412
               

               
Cow position:
               
chr4:60783884-60784134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 119
               

               
Conread position:
               
150-477
               

               
Cow position:
               
chr4:51605768-51605443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
181, 59
               

               
Conread position:
               
153-477
               

               
Cow position:
               
chr4:52087778-52088103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
181, 81
               

               
Conread position:
               
158-426
               

               
Cow position:
               
chr4:1374216-1374481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
159-413
               

               
Cow position:
               
chr4:24497968-24497723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
161-469
               

               
Cow position:
               
chr4:48409415-48409098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
157, 59
               

               
Conread position:
               
164-472
               

               
Cow position:
               
chr4:37880786-37881103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
177-415
               

               
Cow position:
               
chr4:20066354-20066113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 206
               

               
Conread position:
               
177-475
               

               
Cow position:
               
chr4:5913482-5913171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 15
               

               
Conread position:
               
185-464
               

               
Cow position:
               
chr4:30763-30476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
53, 111
               

               
Conread position:
               
187-412
               

               
Cow position:
               
chr4:12995845-12996061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
187-475
               

               
Cow position:
               
chr4:5580436-5580732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
142, 27
               

               
Conread position:
               
194-474
               

               
Cow position:
               
chr4:21250144-21249854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 56
               

               
Conread position:
               
206-470
               

               
Cow position:
               
chr4:40434004-40433736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
129, 14
               

               
Conread position:
               
207-429
               

               
Cow position:
               
chr4:48283383-48283157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
215-335
               

               
Cow position:
               
chr4:22713802-22713682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
218-415
               

               
Cow position:
               
chr4:19729189-19728996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
222-386
               

               
Cow position:
               
chr4:47244140-47243981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
223-477
               

               
Cow position:
               
chr4:5002678-5002933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
109, 41
               

               
Conread position:
               
230-477
               

               
Cow position:
               
chr4:184213-184464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
244-477
               

               
Cow position:
               
chr4:37035299-37035058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
258-462
               

               
Cow position:
               
chr4:38877710-38877929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
261-477
               

               
Cow position:
               
chr4:44279987-44279758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
276-475
               

               
Cow position:
               
chr4:65604504-65604300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
5, 20
               

               
Conread position:
               
280-469
               

               
Cow position:
               
chr4:24415535-24415722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
156, 44
               
Show alignments to all cow chromosomes.