Cow genome map

Conread name: Pla1-C0000039_N19

Conread position: 80-494
Cow position: chr12:11588011-11587578 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 303
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 54, 45

Conread position: 80-506
Cow position: chr12:5631660-5632078 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 296
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 141, 43

Conread position: 144-502
Cow position: chr12:17001419-17001064 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 93

Conread position: 146-488
Cow position: chr12:17624659-17625006 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 236

Conread position: 155-342
Cow position: chr12:29731478-29731274 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 155-454
Cow position: chr12:23446882-23446573 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 16

Conread position: 155-462
Cow position: chr12:22284956-22285276 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 79, 20

Conread position: 155-488
Cow position: chr12:37732630-37732966 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 82, 16

Conread position: 157-336
Cow position: chr12:29316298-29316496 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 14

Conread position: 157-352
Cow position: chr12:2734746-2734958 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 157-462
Cow position: chr12:24032653-24032344 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 30

Conread position: 160-488
Cow position: chr12:37728290-37727958 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 79, 11

Conread position: 161-345
Cow position: chr12:45126699-45126896 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 161-406
Cow position: chr12:37514120-37514382 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 26, 215

Conread position: 161-426
Cow position: chr12:1333378-1333107 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 80, 209

Conread position: 161-482
Cow position: chr12:23916999-23916665 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 10

Conread position: 161-502
Cow position: chr12:33458282-33457947 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 131, 63

Conread position: 161-506
Cow position: chr12:40910125-40910490 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 65, 10

Conread position: 163-347
Cow position: chr12:48578993-48578798 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 76, 9

Conread position: 163-386
Cow position: chr12:33949058-33948821 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 75, 8

Conread position: 163-408
Cow position: chr12:6235430-6235182 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 151
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 43, 14

Conread position: 163-449
Cow position: chr12:44202835-44203127 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 50, 173

Conread position: 163-451
Cow position: chr12:9766723-9767020 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 70, 10

Conread position: 163-453
Cow position: chr12:26576051-26575737 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 163-487
Cow position: chr12:38774087-38774422 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 78, 10

Conread position: 163-500
Cow position: chr12:26217668-26218026 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 35

Conread position: 163-501
Cow position: chr12:4769078-4768729 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 75, 222

Conread position: 163-502
Cow position: chr12:6241483-6241115 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 63, 318

Conread position: 163-502
Cow position: chr12:18518831-18518468 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 235

Conread position: 163-506
Cow position: chr12:5714777-5714424 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 127

Conread position: 163-507
Cow position: chr12:17031767-17031410 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 132

Conread position: 163-507
Cow position: chr12:25804987-25805315 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 265
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 74, 10

Conread position: 163-507
Cow position: chr12:30806011-30805649 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 226

Conread position: 163-507
Cow position: chr12:31948270-31947918 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 75, 8

Conread position: 163-507
Cow position: chr12:34161562-34161214 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 25

Conread position: 163-509
Cow position: chr12:34465860-34466213 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 74, 10

Conread position: 164-458
Cow position: chr12:17269960-17269646 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 232

Conread position: 166-349
Cow position: chr12:14986903-14986702 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 166-365
Cow position: chr12:45039263-45039043 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 166-366
Cow position: chr12:9229360-9229564 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 166-370
Cow position: chr12:24273216-24273427 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 74, 148

Conread position: 166-374
Cow position: chr12:17252047-17252270 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 171

Conread position: 166-397
Cow position: chr12:5554181-5554426 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 200

Conread position: 166-416
Cow position: chr12:18582843-18583104 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 70, 26

Conread position: 166-429
Cow position: chr12:19261351-19261074 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 65, 227

Conread position: 166-432
Cow position: chr12:37008554-37008831 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 69, 142

Conread position: 166-460
Cow position: chr12:7902649-7902955 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 77, 225

Conread position: 166-483
Cow position: chr12:20776773-20777100 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 122

Conread position: 166-488
Cow position: chr12:47804291-47803972 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 71, 82

Conread position: 166-494
Cow position: chr12:11836384-11836044 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 60, 17

Conread position: 166-494
Cow position: chr12:25561522-25561183 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 219

Conread position: 166-502
Cow position: chr12:5635296-5635642 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 221

Conread position: 166-502
Cow position: chr12:17879149-17879500 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 132

Conread position: 166-502
Cow position: chr12:18123822-18123488 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 208

Conread position: 166-502
Cow position: chr12:18420765-18421121 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 132

Conread position: 166-502
Cow position: chr12:30170808-30170473 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 153

Conread position: 166-502
Cow position: chr12:33129410-33129070 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 63, 187

Conread position: 166-502
Cow position: chr12:33851512-33851161 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 165

Conread position: 166-502
Cow position: chr12:39465721-39465384 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 210

Conread position: 166-502
Cow position: chr12:41084201-41083871 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 87, 26

Conread position: 166-508
Cow position: chr12:18577983-18577639 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 213

Conread position: 166-508
Cow position: chr12:19714905-19715238 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 60, 24

Conread position: 166-511
Cow position: chr12:7884524-7884874 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 212

Conread position: 167-367
Cow position: chr12:45092595-45092381 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 167-506
Cow position: chr12:35669317-35669675 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 70, 25

Conread position: 169-370
Cow position: chr12:40881770-40881979 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 169-451
Cow position: chr12:24116220-24116510 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 183

Conread position: 169-502
Cow position: chr12:24559493-24559159 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 218
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 58

Conread position: 169-502
Cow position: chr12:27055737-27055412 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 218
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 124, 18

Conread position: 169-502
Cow position: chr12:30210623-30210284 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 211

Conread position: 169-502
Cow position: chr12:36544492-36544847 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 301

Conread position: 169-502
Cow position: chr12:48415367-48415711 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 69, 29

Conread position: 170-366
Cow position: chr12:24166797-24167008 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 170-398
Cow position: chr12:26777042-26777283 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 51, 152

Conread position: 170-500
Cow position: chr12:27802906-27803242 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 72, 213

Conread position: 170-502
Cow position: chr12:36500795-36501146 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 223

Conread position: 170-507
Cow position: chr12:15204983-15204625 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 122

Conread position: 172-500
Cow position: chr12:22515588-22515931 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 228
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 172

Conread position: 172-502
Cow position: chr12:30194843-30194511 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 67, 20

Conread position: 173-335
Cow position: chr12:6465376-6465543 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 94

Conread position: 173-374
Cow position: chr12:3616132-3615930 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 64, 152

Conread position: 173-392
Cow position: chr12:18513777-18514015 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 189

Conread position: 173-482
Cow position: chr12:4720093-4719768 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 65, 211

Conread position: 173-483
Cow position: chr12:15122474-15122142 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 221

Conread position: 173-502
Cow position: chr12:11057015-11056682 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 20

Conread position: 174-367
Cow position: chr12:6484276-6484075 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 58, 143

Conread position: 174-477
Cow position: chr12:27366055-27365754 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 44

Conread position: 174-491
Cow position: chr12:12637037-12637374 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 215

Conread position: 175-371
Cow position: chr12:26151333-26151529 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 38

Conread position: 175-417
Cow position: chr12:6468926-6469173 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 57, 212

Conread position: 175-465
Cow position: chr12:31517036-31517327 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 62, 196

Conread position: 176-507
Cow position: chr12:31429446-31429775 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 75, 61

Conread position: 190-507
Cow position: chr12:37770998-37770670 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 16

Conread position: 193-511
Cow position: chr12:43942601-43942271 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 45, 128

Conread position: 201-502
Cow position: chr12:28471749-28471441 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 90, 65

Conread position: 218-500
Cow position: chr12:30605079-30605347 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 8, 19

Conread position: 220-501
Cow position: chr12:9143471-9143200 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 11

Conread position: 220-502
Cow position: chr12:4008202-4008475 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 32

Conread position: 220-502
Cow position: chr12:31228657-31228376 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 155

Conread position: 220-502
Cow position: chr12:44622436-44622156 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 79

Conread position: 220-511
Cow position: chr12:32715129-32714837 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 115

Conread position: 222-508
Cow position: chr12:12304462-12304189 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 17

Conread position: 223-502
Cow position: chr12:5801127-5800836 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 13, 119

Conread position: 224-500
Cow position: chr12:44595730-44596006 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 7

Conread position: 225-465
Cow position: chr12:37169866-37170103 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 26, 154

Conread position: 225-502
Cow position: chr12:15240660-15240922 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 8

Conread position: 225-507
Cow position: chr12:31532325-31532609 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 13

Conread position: 226-363
Cow position: chr12:36261768-36261628 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 226-502
Cow position: chr12:33323420-33323693 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 67, 11

Conread position: 227-338
Cow position: chr12:19371812-19371926 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 227-403
Cow position: chr12:30819323-30819145 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 11, 151

Conread position: 227-461
Cow position: chr12:35770943-35771175 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 147

Conread position: 227-488
Cow position: chr12:30919503-30919237 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 236

Conread position: 227-500
Cow position: chr12:2711577-2711296 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 97

Conread position: 227-501
Cow position: chr12:25452367-25452641 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 14, 149

Conread position: 227-501
Cow position: chr12:35378278-35378007 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 15

Conread position: 227-502
Cow position: chr12:15531133-15530860 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 50

Conread position: 227-502
Cow position: chr12:28213587-28213320 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 57

Conread position: 227-502
Cow position: chr12:30753797-30753524 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 78

Conread position: 227-502
Cow position: chr12:32169618-32169342 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 92

Conread position: 227-507
Cow position: chr12:42163118-42162834 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 24, 64

Conread position: 228-338
Cow position: chr12:6480717-6480604 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 228-502
Cow position: chr12:6163950-6164223 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 184, 45

Conread position: 228-502
Cow position: chr12:30661873-30662147 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 21, 131

Conread position: 229-502
Cow position: chr12:29995388-29995655 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 92

Conread position: 229-509
Cow position: chr12:6488917-6489189 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 23, 77

Conread position: 232-494
Cow position: chr12:30745789-30745527 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 19, 88

Conread position: 233-461
Cow position: chr12:46120760-46120986 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 18, 148

Conread position: 233-472
Cow position: chr12:42784384-42784140 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 146

Conread position: 233-491
Cow position: chr12:28582438-28582688 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 60, 33

Conread position: 233-507
Cow position: chr12:17774866-17774600 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 10, 137

Conread position: 234-408
Cow position: chr12:3371475-3371645 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 17, 69

Conread position: 235-384
Cow position: chr12:23644733-23644885 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 150

Conread position: 235-385
Cow position: chr12:5839585-5839737 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 141

Conread position: 235-408
Cow position: chr12:33319598-33319769 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 16, 125

Conread position: 235-450
Cow position: chr12:3371788-3372004 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 79

Conread position: 235-489
Cow position: chr12:6485143-6485391 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 74

Conread position: 235-493
Cow position: chr12:42684875-42685134 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 16, 125

Conread position: 235-502
Cow position: chr12:2813297-2813028 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 139

Conread position: 235-502
Cow position: chr12:6210088-6210355 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 138

Conread position: 235-502
Cow position: chr12:8943154-8943415 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 123

Conread position: 235-502
Cow position: chr12:19502358-19502614 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 16, 125

Conread position: 235-502
Cow position: chr12:23798169-23797910 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 123

Conread position: 235-507
Cow position: chr12:1773591-1773872 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 144

Conread position: 235-508
Cow position: chr12:17881931-17881656 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 139

Conread position: 235-509
Cow position: chr12:34333180-34332894 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 132

Conread position: 236-342
Cow position: chr12:27572171-27572280 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 236-347
Cow position: chr12:6139511-6139626 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 236-347
Cow position: chr12:24437566-24437680 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 236-363
Cow position: chr12:27357456-27357327 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 109
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 15, 102

Conread position: 236-367
Cow position: chr12:15260831-15260698 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 115
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 236-369
Cow position: chr12:19274330-19274464 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 35

Conread position: 236-369
Cow position: chr12:46464001-46464134 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 22

Conread position: 236-449
Cow position: chr12:47193955-47194158 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 15, 119

Conread position: 236-451
Cow position: chr12:16670335-16670119 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 56, 142

Conread position: 236-452
Cow position: chr12:45028416-45028205 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 45

Conread position: 236-461
Cow position: chr12:4866886-4866666 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 125

Conread position: 236-465
Cow position: chr12:41215816-41216044 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 80

Conread position: 236-482
Cow position: chr12:34473556-34473801 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 55

Conread position: 236-485
Cow position: chr12:15089584-15089334 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 15, 48

Conread position: 236-486
Cow position: chr12:6410665-6410913 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 16, 138

Conread position: 236-487
Cow position: chr12:24663183-24662936 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 136

Conread position: 236-494
Cow position: chr12:45820297-45820548 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 134

Conread position: 236-500
Cow position: chr12:23574832-23574574 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 15, 141

Conread position: 236-500
Cow position: chr12:25177529-25177779 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 85

Conread position: 236-502
Cow position: chr12:6720396-6720125 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 6

Conread position: 236-502
Cow position: chr12:18020926-18020659 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 66

Conread position: 236-502
Cow position: chr12:18388222-18388480 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 236-502
Cow position: chr12:24211475-24211222 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 83

Conread position: 236-502
Cow position: chr12:27037381-27037643 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 140

Conread position: 236-502
Cow position: chr12:29770510-29770771 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 58

Conread position: 236-502
Cow position: chr12:45965189-45965450 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 15, 77

Conread position: 236-503
Cow position: chr12:19691165-19691433 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 62

Conread position: 236-506
Cow position: chr12:19869529-19869267 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 59, 29

Conread position: 236-507
Cow position: chr12:26222920-26223189 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 11, 101

Conread position: 236-507
Cow position: chr12:42879762-42879496 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 137

Conread position: 237-408
Cow position: chr12:11659989-11659824 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 14, 46

Conread position: 237-444
Cow position: chr12:30590835-30590628 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 14, 127

Conread position: 237-502
Cow position: chr12:34148290-34148546 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 14, 142

Conread position: 238-380
Cow position: chr12:15641040-15641187 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 238-449
Cow position: chr12:7110264-7110056 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 127

Conread position: 238-454
Cow position: chr12:3197335-3197127 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 13, 121

Conread position: 238-455
Cow position: chr12:15173890-15173675 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 11, 137

Conread position: 238-462
Cow position: chr12:19258344-19258122 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 11, 64

Conread position: 238-463
Cow position: chr12:12300986-12300763 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 126

Conread position: 238-468
Cow position: chr12:36790745-36790974 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 121

Conread position: 238-477
Cow position: chr12:15703431-15703669 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 67

Conread position: 238-488
Cow position: chr12:25320981-25320739 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 60

Conread position: 238-488
Cow position: chr12:29483819-29484073 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 158

Conread position: 238-493
Cow position: chr12:23855899-23855647 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 13, 20

Conread position: 238-494
Cow position: chr12:30438304-30438056 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 56

Conread position: 238-499
Cow position: chr12:7000538-7000801 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 14, 29

Conread position: 238-500
Cow position: chr12:7978104-7977847 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 58

Conread position: 238-500
Cow position: chr12:41581177-41580920 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 62

Conread position: 238-500
Cow position: chr12:44517671-44517932 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 136

Conread position: 238-502
Cow position: chr12:5906123-5905859 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 138

Conread position: 238-502
Cow position: chr12:5940408-5940149 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 124

Conread position: 238-502
Cow position: chr12:18765906-18766175 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 13, 151

Conread position: 238-502
Cow position: chr12:27563310-27563581 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 137

Conread position: 238-502
Cow position: chr12:29969646-29969382 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 137

Conread position: 238-502
Cow position: chr12:41474156-41473893 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 129

Conread position: 238-502
Cow position: chr12:42181062-42181335 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 244

Conread position: 238-507
Cow position: chr12:31959946-31959689 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 55

Conread position: 238-507
Cow position: chr12:35368709-35368438 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 136

Conread position: 238-508
Cow position: chr12:41159654-41159391 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 13, 56

Conread position: 239-451
Cow position: chr12:42234125-42233913 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 124

Conread position: 239-461
Cow position: chr12:4596530-4596309 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 77

Conread position: 239-464
Cow position: chr12:38184659-38184439 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 55, 134

Conread position: 239-465
Cow position: chr12:22540273-22540045 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 136

Conread position: 239-465
Cow position: chr12:45090286-45090518 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 124

Conread position: 239-483
Cow position: chr12:35123954-35123714 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 69

Conread position: 239-486
Cow position: chr12:19507703-19507451 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 215

Conread position: 239-508
Cow position: chr12:39486481-39486230 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 254, 12

Conread position: 240-437
Cow position: chr12:3092515-3092705 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 119

Conread position: 240-482
Cow position: chr12:25340594-25340336 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 12, 126

Conread position: 240-502
Cow position: chr12:3950280-3950545 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 136

Conread position: 240-502
Cow position: chr12:33976264-33976005 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 128

Conread position: 240-502
Cow position: chr12:42967060-42966802 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 78

Conread position: 240-502
Cow position: chr12:46314639-46314901 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 85

Conread position: 240-507
Cow position: chr12:18943593-18943849 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 121

Conread position: 240-511
Cow position: chr12:46333409-46333147 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 68

Conread position: 241-506
Cow position: chr12:8868818-8869080 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 55

Conread position: 241-507
Cow position: chr12:15762851-15763115 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 217, 47

Conread position: 242-502
Cow position: chr12:18963866-18964125 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 126

Conread position: 242-502
Cow position: chr12:25917214-25917461 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 51, 78

Conread position: 242-511
Cow position: chr12:15429533-15429809 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 134

Conread position: 243-506
Cow position: chr12:22882118-22881847 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 7, 133

Conread position: 245-502
Cow position: chr12:1889518-1889778 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 172
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 6, 98

Conread position: 249-461
Cow position: chr12:11090471-11090271 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 64

Conread position: 249-483
Cow position: chr12:19664477-19664709 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 107

Conread position: 251-502
Cow position: chr12:17080313-17080062 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 117

Conread position: 254-502
Cow position: chr12:34673290-34673538 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 121

Conread position: 259-431
Cow position: chr12:18023380-18023559 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 177

Conread position: 263-502
Cow position: chr12:13156708-13156480 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 10

Conread position: 264-502
Cow position: chr12:3906513-3906274 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 29, 57

Conread position: 267-476
Cow position: chr12:20636115-20636330 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 95

Conread position: 267-494
Cow position: chr12:19508522-19508757 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 26, 128

Conread position: 267-502
Cow position: chr12:20071536-20071774 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 100

Conread position: 267-502
Cow position: chr12:28748978-28748740 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 104

Conread position: 267-507
Cow position: chr12:18550918-18550677 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 26, 112

Conread position: 269-506
Cow position: chr12:9710173-9710412 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 25, 105

Conread position: 271-507
Cow position: chr12:730903-731140 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 22, 82

Conread position: 274-487
Cow position: chr12:18420500-18420288 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 61

Conread position: 277-502
Cow position: chr12:20326801-20326576 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 98

Conread position: 283-490
Cow position: chr12:4790554-4790753 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 19

Conread position: 291-487
Cow position: chr12:29921774-29921964 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 107, 78

Conread position: 291-500
Cow position: chr12:3510572-3510371 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 68

Conread position: 291-500
Cow position: chr12:28010898-28011094 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 12

Conread position: 295-502
Cow position: chr12:12178930-12178727 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 91, 56

Conread position: 295-507
Cow position: chr12:26317472-26317260 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 117, 78

Conread position: 297-509
Cow position: chr12:8710826-8710620 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 58

Conread position: 302-502
Cow position: chr12:38454909-38454719 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 106, 66

Conread position: 303-500
Cow position: chr12:3579285-3579089 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 109, 29

Conread position: 319-488
Cow position: chr12:29411506-29411673 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 159, 60

Conread position: 319-500
Cow position: chr12:4116472-4116297 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 174, 50

Conread position: 319-500
Cow position: chr12:30476465-30476285 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 83, 51

Conread position: 327-502
Cow position: chr12:25456094-25455921 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 45

Conread position: 327-502
Cow position: chr12:41214346-41214520 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 49

Conread position: 330-502
Cow position: chr12:32391820-32391647 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 43

Conread position: 335-507
Cow position: chr12:38511869-38512047 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 37

Conread position: 367-472
Cow position: chr12:38010118-38010226 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 371-502
Cow position: chr12:31841379-31841243 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 372-507
Cow position: chr12:24440755-24440615 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 376-502
Cow position: chr12:18021527-18021399 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 118

Conread position: 376-509
Cow position: chr12:40270161-40270298 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Show alignments to all cow chromosomes.