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Cow genome map

           
Conread name:
           
Pla1-C0000039_N19
        

               
Conread position:
               
115-403
               

               
Cow position:
               
chr14:21224445-21224740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
113, 8
               

               
Conread position:
               
115-496
               

               
Cow position:
               
chr14:16550200-16549809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 8
               

               
Conread position:
               
148-502
               

               
Cow position:
               
chr14:33247590-33247231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 220
               

               
Conread position:
               
152-502
               

               
Cow position:
               
chr14:9019875-9020226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
94, 197
               

               
Conread position:
               
153-433
               

               
Cow position:
               
chr14:47170515-47170220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
87, 191
               

               
Conread position:
               
153-457
               

               
Cow position:
               
chr14:12244547-12244226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
86, 220
               

               
Conread position:
               
153-502
               

               
Cow position:
               
chr14:10858275-10858634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
47, 54
               

               
Conread position:
               
153-507
               

               
Cow position:
               
chr14:14182186-14182552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
153-509
               

               
Cow position:
               
chr14:41749920-41749547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
154-309
               

               
Cow position:
               
chr14:24845815-24845978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
155-506
               

               
Cow position:
               
chr14:42596232-42596585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
157-368
               

               
Cow position:
               
chr14:31177441-31177217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 140
               

               
Conread position:
               
161-477
               

               
Cow position:
               
chr14:46654671-46654369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
132, 48
               

               
Conread position:
               
161-485
               

               
Cow position:
               
chr14:37884538-37884229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
132, 67
               

               
Conread position:
               
161-494
               

               
Cow position:
               
chr14:5222441-5222097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
161-500
               

               
Cow position:
               
chr14:20667161-20666824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
161-501
               

               
Cow position:
               
chr14:41210708-41211054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
161-502
               

               
Cow position:
               
chr14:13385210-13385572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 7
               

               
Conread position:
               
161-507
               

               
Cow position:
               
chr14:26490874-26490534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
161-509
               

               
Cow position:
               
chr14:36289946-36289593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
162-459
               

               
Cow position:
               
chr14:14187189-14187490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
162-494
               

               
Cow position:
               
chr14:19188897-19189229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
162-507
               

               
Cow position:
               
chr14:24416738-24417091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
163-312
               

               
Cow position:
               
chr14:12505772-12505623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
163-315
               

               
Cow position:
               
chr14:41267877-41267715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
163-378
               

               
Cow position:
               
chr14:13731252-13731019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 229
               

               
Conread position:
               
163-389
               

               
Cow position:
               
chr14:27733453-27733695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
163-420
               

               
Cow position:
               
chr14:19827627-19827354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 32
               

               
Conread position:
               
163-451
               

               
Cow position:
               
chr14:37422928-37422638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 127
               

               
Conread position:
               
163-451
               

               
Cow position:
               
chr14:41253134-41252839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 147
               

               
Conread position:
               
163-495
               

               
Cow position:
               
chr14:13845839-13846181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
163-500
               

               
Cow position:
               
chr14:43046021-43046347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chr14:21284499-21284829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
163-503
               

               
Cow position:
               
chr14:33791038-33791389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 117
               

               
Conread position:
               
163-507
               

               
Cow position:
               
chr14:14622323-14621965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
79, 167
               

               
Conread position:
               
164-495
               

               
Cow position:
               
chr14:15997905-15997573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 213
               

               
Conread position:
               
165-368
               

               
Cow position:
               
chr14:10706725-10706945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 175
               

               
Conread position:
               
165-371
               

               
Cow position:
               
chr14:606803-606593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
165-503
               

               
Cow position:
               
chr14:19129377-19129711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
166-291
               

               
Cow position:
               
chr14:2712158-2712031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
166-304
               

               
Cow position:
               
chr14:40806750-40806605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
166-335
               

               
Cow position:
               
chr14:13928430-13928606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
166-345
               

               
Cow position:
               
chr14:109630-109443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 58
               

               
Conread position:
               
166-354
               

               
Cow position:
               
chr14:36775511-36775706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 147
               

               
Conread position:
               
166-362
               

               
Cow position:
               
chr14:11576917-11577132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
166-408
               

               
Cow position:
               
chr14:2344942-2345174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
166-429
               

               
Cow position:
               
chr14:11729259-11728980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 218
               

               
Conread position:
               
166-431
               

               
Cow position:
               
chr14:1868940-1868668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
166-431
               

               
Cow position:
               
chr14:16352206-16352475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 122
               

               
Conread position:
               
166-436
               

               
Cow position:
               
chr14:40208756-40209035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
49, 207
               

               
Conread position:
               
166-461
               

               
Cow position:
               
chr14:25903380-25903684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
70, 209
               

               
Conread position:
               
166-464
               

               
Cow position:
               
chr14:12954527-12954221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
166-477
               

               
Cow position:
               
chr14:44084628-44084303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 316
               

               
Conread position:
               
166-488
               

               
Cow position:
               
chr14:23080906-23080578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 151
               

               
Conread position:
               
166-494
               

               
Cow position:
               
chr14:4877379-4877038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
51, 144
               

               
Conread position:
               
166-494
               

               
Cow position:
               
chr14:20110874-20110530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 227
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr14:18345876-18345534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 150
               

               
Conread position:
               
166-501
               

               
Cow position:
               
chr14:8848126-8848446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
61, 92
               

               
Conread position:
               
166-501
               

               
Cow position:
               
chr14:16256622-16256967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 227
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr14:8541359-8541008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
60, 206
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr14:11615355-11615020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr14:23682115-23682463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
75, 225
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr14:25231768-25231446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
222, 92
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr14:35700295-35700629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr14:42155119-42154762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr14:49022032-49021700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr14:50040101-50040444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 118
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr14:13809802-13810144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 174
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr14:20826339-20826682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
67, 117
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chr14:33714826-33714472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 205
               

               
Conread position:
               
166-511
               

               
Cow position:
               
chr14:5835778-5836114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
166-511
               

               
Cow position:
               
chr14:38355056-38355397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
166-511
               

               
Cow position:
               
chr14:39037087-39037443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 111
               

               
Conread position:
               
168-432
               

               
Cow position:
               
chr14:16524319-16524603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
168-502
               

               
Cow position:
               
chr14:16760249-16760598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 204
               

               
Conread position:
               
169-289
               

               
Cow position:
               
chr14:5629591-5629470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
169-376
               

               
Cow position:
               
chr14:29734509-29734286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
169-408
               

               
Cow position:
               
chr14:25227998-25228243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
169-494
               

               
Cow position:
               
chr14:36254838-36254514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
68, 200
               

               
Conread position:
               
169-502
               

               
Cow position:
               
chr14:5630019-5630360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 221
               

               
Conread position:
               
169-502
               

               
Cow position:
               
chr14:20640778-20640425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 167
               

               
Conread position:
               
169-502
               

               
Cow position:
               
chr14:39770370-39770031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
169-502
               

               
Cow position:
               
chr14:39918885-39918561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
66, 44
               

               
Conread position:
               
169-507
               

               
Cow position:
               
chr14:24236673-24237034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
60, 224
               

               
Conread position:
               
169-509
               

               
Cow position:
               
chr14:50589539-50589174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
170-394
               

               
Cow position:
               
chr14:11975862-11975635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
170-406
               

               
Cow position:
               
chr14:11643394-11643153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
59, 162
               

               
Conread position:
               
170-483
               

               
Cow position:
               
chr14:18309448-18309117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
69, 305
               

               
Conread position:
               
170-500
               

               
Cow position:
               
chr14:22988887-22989232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 178
               

               
Conread position:
               
170-502
               

               
Cow position:
               
chr14:12036977-12036643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
67, 91
               

               
Conread position:
               
170-502
               

               
Cow position:
               
chr14:28803867-28803542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
122, 79
               

               
Conread position:
               
172-465
               

               
Cow position:
               
chr14:35503217-35503527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
66, 199
               

               
Conread position:
               
173-329
               

               
Cow position:
               
chr14:10780322-10780478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
63, 119
               

               
Conread position:
               
173-374
               

               
Cow position:
               
chr14:42513563-42513355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
90, 64
               

               
Conread position:
               
173-401
               

               
Cow position:
               
chr14:37901855-37902097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
173-406
               

               
Cow position:
               
chr14:41838004-41837769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr14:40754389-40754085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
65, 214
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr14:46997907-46998205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
173-462
               

               
Cow position:
               
chr14:23424120-23424418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 99
               

               
Conread position:
               
173-462
               

               
Cow position:
               
chr14:23442881-23443179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 99
               

               
Conread position:
               
173-464
               

               
Cow position:
               
chr14:13006379-13006667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
173-479
               

               
Cow position:
               
chr14:12512036-12511723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 121
               

               
Conread position:
               
173-481
               

               
Cow position:
               
chr14:48772772-48773082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
173-491
               

               
Cow position:
               
chr14:36555275-36554965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 57
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chr14:2975231-2974893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 174
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chr14:6600097-6599749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 92
               

               
Conread position:
               
173-503
               

               
Cow position:
               
chr14:37679129-37678799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
173-507
               

               
Cow position:
               
chr14:8786682-8786344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
72, 130
               

               
Conread position:
               
173-511
               

               
Cow position:
               
chr14:23712550-23712896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 221
               

               
Conread position:
               
174-309
               

               
Cow position:
               
chr14:33447654-33447527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr14:7959654-7959968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 126
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr14:33462063-33462359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
174-503
               

               
Cow position:
               
chr14:47673022-47672682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 161
               

               
Conread position:
               
175-500
               

               
Cow position:
               
chr14:24387308-24387647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
175-502
               

               
Cow position:
               
chr14:8101654-8101991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr14:47027496-47027162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
176-429
               

               
Cow position:
               
chr14:12127539-12127284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 188
               

               
Conread position:
               
177-362
               

               
Cow position:
               
chr14:19487161-19487359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
177-502
               

               
Cow position:
               
chr14:39434395-39434058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
62, 113
               

               
Conread position:
               
178-507
               

               
Cow position:
               
chr14:18904728-18904404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
179-387
               

               
Cow position:
               
chr14:40191455-40191675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
181-502
               

               
Cow position:
               
chr14:22583031-22583343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
188-502
               

               
Cow position:
               
chr14:34083279-34082953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 237
               

               
Conread position:
               
190-307
               

               
Cow position:
               
chr14:10899735-10899855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
191-457
               

               
Cow position:
               
chr14:6226735-6226471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr14:12924180-12924378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
192-450
               

               
Cow position:
               
chr14:2038919-2038666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 184
               

               
Conread position:
               
195-374
               

               
Cow position:
               
chr14:2833508-2833328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
199-502
               

               
Cow position:
               
chr14:30661896-30662186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
200-509
               

               
Cow position:
               
chr14:20016807-20016491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 166
               

               
Conread position:
               
208-503
               

               
Cow position:
               
chr14:9901092-9901374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
211-451
               

               
Cow position:
               
chr14:29698451-29698208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 154
               

               
Conread position:
               
211-483
               

               
Cow position:
               
chr14:1859710-1859432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
213-483
               

               
Cow position:
               
chr14:6175497-6175765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
220-502
               

               
Cow position:
               
chr14:1978152-1977880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
220-502
               

               
Cow position:
               
chr14:4990919-4991197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
19, 150
               

               
Conread position:
               
226-371
               

               
Cow position:
               
chr14:33643885-33644030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
226-501
               

               
Cow position:
               
chr14:39778677-39778951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 144
               

               
Conread position:
               
226-502
               

               
Cow position:
               
chr14:16237587-16237307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
226-502
               

               
Cow position:
               
chr14:44257847-44258126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 150
               

               
Conread position:
               
227-477
               

               
Cow position:
               
chr14:27076903-27077161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 204
               

               
Conread position:
               
227-489
               

               
Cow position:
               
chr14:21933419-21933153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
227-494
               

               
Cow position:
               
chr14:10631192-10630932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
65, 131
               

               
Conread position:
               
227-500
               

               
Cow position:
               
chr14:38338207-38337947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chr14:8750003-8750277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chr14:25779027-25779293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chr14:26433316-26433042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chr14:36709050-36709322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 102
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chr14:40165351-40165621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
227-505
               

               
Cow position:
               
chr14:9308155-9308429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 104
               

               
Conread position:
               
227-506
               

               
Cow position:
               
chr14:41127823-41128098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
228-489
               

               
Cow position:
               
chr14:48838522-48838783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 148
               

               
Conread position:
               
229-493
               

               
Cow position:
               
chr14:24607890-24608158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 88
               

               
Conread position:
               
229-502
               

               
Cow position:
               
chr14:39775122-39774852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
230-465
               

               
Cow position:
               
chr14:33300633-33300869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
230-500
               

               
Cow position:
               
chr14:43035831-43036079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
63, 87
               

               
Conread position:
               
232-418
               

               
Cow position:
               
chr14:41486328-41486143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
232-487
               

               
Cow position:
               
chr14:45677162-45677409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
233-332
               

               
Cow position:
               
chr14:28706979-28707081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
233-364
               

               
Cow position:
               
chr14:18301892-18302027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
233-392
               

               
Cow position:
               
chr14:5355092-5354934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 142
               

               
Conread position:
               
233-409
               

               
Cow position:
               
chr14:25333991-25334165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 133
               

               
Conread position:
               
233-420
               

               
Cow position:
               
chr14:19959802-19959616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 141
               

               
Conread position:
               
233-500
               

               
Cow position:
               
chr14:19372271-19372539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 142
               

               
Conread position:
               
233-500
               

               
Cow position:
               
chr14:48427006-48427273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr14:25986449-25986719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
58, 6
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr14:32452181-32452455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 135
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr14:35018821-35018553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 141
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr14:37131594-37131857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 18
               

               
Conread position:
               
234-462
               

               
Cow position:
               
chr14:38527359-38527584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
235-355
               

               
Cow position:
               
chr14:2981735-2981614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
235-364
               

               
Cow position:
               
chr14:9307999-9308131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
235-370
               

               
Cow position:
               
chr14:12033300-12033169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
235-387
               

               
Cow position:
               
chr14:10851965-10852117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
235-397
               

               
Cow position:
               
chr14:45577158-45576998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 128
               

               
Conread position:
               
235-422
               

               
Cow position:
               
chr14:24945558-24945370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 140
               

               
Conread position:
               
235-432
               

               
Cow position:
               
chr14:42419339-42419143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
235-461
               

               
Cow position:
               
chr14:26655200-26654973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 138
               

               
Conread position:
               
235-464
               

               
Cow position:
               
chr14:14316821-14317044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
235-479
               

               
Cow position:
               
chr14:33341694-33341936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
235-483
               

               
Cow position:
               
chr14:37447529-37447287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
235-487
               

               
Cow position:
               
chr14:13042692-13042942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr14:15055057-15054787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 147
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr14:16032946-16033209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr14:32371806-32371544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 107
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr14:40230701-40230436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
235-503
               

               
Cow position:
               
chr14:19394297-19394563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
14, 134
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chr14:28378293-28378574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 132
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chr14:34096631-34096385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
235-509
               

               
Cow position:
               
chr14:38920886-38921154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
235-510
               

               
Cow position:
               
chr14:33751472-33751733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
236-352
               

               
Cow position:
               
chr14:40287527-40287646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
236-371
               

               
Cow position:
               
chr14:24913811-24913949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
236-372
               

               
Cow position:
               
chr14:20349797-20349656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
236-379
               

               
Cow position:
               
chr14:16457455-16457598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
236-406
               

               
Cow position:
               
chr14:7636564-7636392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 124
               

               
Conread position:
               
236-411
               

               
Cow position:
               
chr14:5557186-5557011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 139
               

               
Conread position:
               
236-415
               

               
Cow position:
               
chr14:25225663-25225843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
15, 134
               

               
Conread position:
               
236-451
               

               
Cow position:
               
chr14:19359823-19360044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
236-460
               

               
Cow position:
               
chr14:19951501-19951728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 133
               

               
Conread position:
               
236-483
               

               
Cow position:
               
chr14:38747613-38747848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
236-487
               

               
Cow position:
               
chr14:36166878-36167124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
236-494
               

               
Cow position:
               
chr14:15492528-15492789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 141
               

               
Conread position:
               
236-494
               

               
Cow position:
               
chr14:27848120-27848391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 136
               

               
Conread position:
               
236-500
               

               
Cow position:
               
chr14:28115251-28114986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr14:1646249-1645990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr14:24796493-24796225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 21
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr14:26442405-26442140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr14:27592021-27591752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 139
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr14:34199908-34199642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 123
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr14:34983802-34984063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr14:41966166-41966442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
14, 157
               

               
Conread position:
               
236-506
               

               
Cow position:
               
chr14:10078203-10078471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 143
               

               
Conread position:
               
236-509
               

               
Cow position:
               
chr14:16834257-16834546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 143
               

               
Conread position:
               
237-489
               

               
Cow position:
               
chr14:3194802-3195036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
237-501
               

               
Cow position:
               
chr14:20385049-20384785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 130
               

               
Conread position:
               
238-368
               

               
Cow position:
               
chr14:4848285-4848417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 88
               

               
Conread position:
               
238-370
               

               
Cow position:
               
chr14:2571088-2570953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
238-426
               

               
Cow position:
               
chr14:4282569-4282383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
238-451
               

               
Cow position:
               
chr14:7036420-7036205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 137
               

               
Conread position:
               
238-451
               

               
Cow position:
               
chr14:7695203-7695411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
238-461
               

               
Cow position:
               
chr14:22941791-22941562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
238-463
               

               
Cow position:
               
chr14:42436962-42437188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
238-488
               

               
Cow position:
               
chr14:20600322-20600571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
238-488
               

               
Cow position:
               
chr14:24981396-24981644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
238-500
               

               
Cow position:
               
chr14:34355773-34355494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
238-500
               

               
Cow position:
               
chr14:48412945-48412680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
238-501
               

               
Cow position:
               
chr14:31130438-31130182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr14:17841354-17841087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr14:19618813-19618550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 136
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr14:33309566-33309310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr14:35420827-35420559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 137
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr14:38144170-38143910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
14, 129
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr14:49086244-49086508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
238-506
               

               
Cow position:
               
chr14:45605035-45605299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr14:8784138-8784389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr14:33830239-33830506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
238-511
               

               
Cow position:
               
chr14:4227285-4226993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
238-511
               

               
Cow position:
               
chr14:37883979-37883701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 138
               

               
Conread position:
               
239-485
               

               
Cow position:
               
chr14:14949274-14949026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 135
               

               
Conread position:
               
239-500
               

               
Cow position:
               
chr14:10609618-10609890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
239-500
               

               
Cow position:
               
chr14:25403997-25403743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
12, 135
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr14:20712749-20712485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr14:29632943-29632684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr14:40432864-40433121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
240-490
               

               
Cow position:
               
chr14:4203159-4202904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
240-499
               

               
Cow position:
               
chr14:2959463-2959710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 143
               

               
Conread position:
               
240-507
               

               
Cow position:
               
chr14:46973379-46973643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
173, 55
               

               
Conread position:
               
241-511
               

               
Cow position:
               
chr14:45052384-45052652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
51, 101
               

               
Conread position:
               
242-370
               

               
Cow position:
               
chr14:49188891-49188757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
242-477
               

               
Cow position:
               
chr14:12035352-12035584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 66
               

               
Conread position:
               
242-494
               

               
Cow position:
               
chr14:24922042-24922296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
242-502
               

               
Cow position:
               
chr14:42330294-42330553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
242-503
               

               
Cow position:
               
chr14:33338533-33338277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
242-509
               

               
Cow position:
               
chr14:48740927-48740662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 119
               

               
Conread position:
               
243-460
               

               
Cow position:
               
chr14:15039670-15039449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
49, 93
               

               
Conread position:
               
243-494
               

               
Cow position:
               
chr14:28003911-28004170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
50, 96
               

               
Conread position:
               
244-502
               

               
Cow position:
               
chr14:41180771-41180499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
246-449
               

               
Cow position:
               
chr14:6541779-6541576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 123
               

               
Conread position:
               
246-502
               

               
Cow position:
               
chr14:40269895-40269642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
249-450
               

               
Cow position:
               
chr14:5633996-5633789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
44, 129
               

               
Conread position:
               
249-502
               

               
Cow position:
               
chr14:25001984-25002235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 124
               

               
Conread position:
               
250-408
               

               
Cow position:
               
chr14:42480267-42480114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
250-493
               

               
Cow position:
               
chr14:38378966-38379212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
43, 128
               

               
Conread position:
               
254-506
               

               
Cow position:
               
chr14:22966710-22966957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
262-408
               

               
Cow position:
               
chr14:19939087-19939231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
262-502
               

               
Cow position:
               
chr14:41325485-41325238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
31, 214
               

               
Conread position:
               
265-509
               

               
Cow position:
               
chr14:3162692-3162914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
266-507
               

               
Cow position:
               
chr14:29029795-29030040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
267-461
               

               
Cow position:
               
chr14:41809686-41809496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr14:8946117-8945888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr14:12667696-12667925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
267-506
               

               
Cow position:
               
chr14:20010344-20010106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 111
               

               
Conread position:
               
268-456
               

               
Cow position:
               
chr14:26222704-26222899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 127
               

               
Conread position:
               
268-509
               

               
Cow position:
               
chr14:33643809-33643575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
274-500
               

               
Cow position:
               
chr14:47591939-47591718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
276-491
               

               
Cow position:
               
chr14:26859758-26859534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
276-494
               

               
Cow position:
               
chr14:27919759-27919544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
276-502
               

               
Cow position:
               
chr14:11043515-11043291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
279-502
               

               
Cow position:
               
chr14:41479683-41479458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
282-468
               

               
Cow position:
               
chr14:17830894-17831078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
291-507
               

               
Cow position:
               
chr14:12324412-12324634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
121, 82
               

               
Conread position:
               
291-509
               

               
Cow position:
               
chr14:33538943-33538710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
295-507
               

               
Cow position:
               
chr14:33326398-33326183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
162, 76
               

               
Conread position:
               
299-509
               

               
Cow position:
               
chr14:33828163-33828367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
114, 70
               

               
Conread position:
               
319-500
               

               
Cow position:
               
chr14:11820099-11819923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
319-511
               

               
Cow position:
               
chr14:20483436-20483249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
183, 54
               

               
Conread position:
               
320-506
               

               
Cow position:
               
chr14:28708041-28708234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
321-506
               

               
Cow position:
               
chr14:8754342-8754533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 171
               

               
Conread position:
               
326-502
               

               
Cow position:
               
chr14:27312451-27312628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
348-511
               

               
Cow position:
               
chr14:41756306-41756477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
367-507
               

               
Cow position:
               
chr14:12484237-12484093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 103
               

               
Conread position:
               
372-489
               

               
Cow position:
               
chr14:19633247-19633367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
374-502
               

               
Cow position:
               
chr14:28924456-28924588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
376-507
               

               
Cow position:
               
chr14:8080044-8080175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 111
               
Show alignments to all cow chromosomes.