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Cow genome map

           
Conread name:
           
Pla1-C0000039_N19
        

               
Conread position:
               
80-465
               

               
Cow position:
               
chr17:40421960-40421590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
82-304
               

               
Cow position:
               
chr17:36958209-36957980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
127-462
               

               
Cow position:
               
chr17:40406698-40406366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
129-489
               

               
Cow position:
               
chr17:6424025-6423656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
153-406
               

               
Cow position:
               
chr17:7577816-7577570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
139, 27
               

               
Conread position:
               
153-427
               

               
Cow position:
               
chr17:25800636-25800925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 127
               

               
Conread position:
               
153-483
               

               
Cow position:
               
chr17:11101571-11101899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
153-486
               

               
Cow position:
               
chr17:25616493-25616157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
39, 169
               

               
Conread position:
               
153-500
               

               
Cow position:
               
chr17:7143105-7142747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
85, 238
               

               
Conread position:
               
153-502
               

               
Cow position:
               
chr17:18720204-18720572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
153-507
               

               
Cow position:
               
chr17:24004621-24004259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
69, 129
               

               
Conread position:
               
153-507
               

               
Cow position:
               
chr17:42259448-42259074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
153-509
               

               
Cow position:
               
chr17:18860496-18860851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 21
               

               
Conread position:
               
155-431
               

               
Cow position:
               
chr17:39606667-39606383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
155-502
               

               
Cow position:
               
chr17:25917134-25916777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
155-503
               

               
Cow position:
               
chr17:40772075-40771715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
81, 10
               

               
Conread position:
               
156-429
               

               
Cow position:
               
chr17:33154913-33155200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
80, 191
               

               
Conread position:
               
157-333
               

               
Cow position:
               
chr17:35276206-35276390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
157-461
               

               
Cow position:
               
chr17:12946116-12946435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
157-502
               

               
Cow position:
               
chr17:11296883-11296520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
157-502
               

               
Cow position:
               
chr17:13922725-13922360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
161-348
               

               
Cow position:
               
chr17:10769289-10769478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
161-422
               

               
Cow position:
               
chr17:17044095-17044371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 221
               

               
Conread position:
               
161-449
               

               
Cow position:
               
chr17:16617040-16616754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
161-483
               

               
Cow position:
               
chr17:11912265-11912596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 234
               

               
Conread position:
               
161-501
               

               
Cow position:
               
chr17:31856912-31856545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 234
               

               
Conread position:
               
161-502
               

               
Cow position:
               
chr17:15664915-15664549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
161-502
               

               
Cow position:
               
chr17:29714974-29715305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
162-507
               

               
Cow position:
               
chr17:1634254-1634611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 233
               

               
Conread position:
               
163-368
               

               
Cow position:
               
chr17:25169287-25169091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
163-369
               

               
Cow position:
               
chr17:17035183-17034961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
163-370
               

               
Cow position:
               
chr17:34835887-34836097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
163-404
               

               
Cow position:
               
chr17:9932073-9932320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 219
               

               
Conread position:
               
163-408
               

               
Cow position:
               
chr17:25511480-25511220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 207
               

               
Conread position:
               
163-432
               

               
Cow position:
               
chr17:25126581-25126304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
83, 10
               

               
Conread position:
               
163-483
               

               
Cow position:
               
chr17:3354107-3353782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
163-490
               

               
Cow position:
               
chr17:33275522-33275853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
67, 10
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chr17:20022276-20022636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 230
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chr17:21243572-21243902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 10
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chr17:22564416-22564062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chr17:23246424-23246095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chr17:25128116-25128465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 227
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chr17:36330730-36331084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chr17:41289806-41290139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
77, 99
               

               
Conread position:
               
163-507
               

               
Cow position:
               
chr17:25612324-25611967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
163-508
               

               
Cow position:
               
chr17:20157846-20157484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
58, 228
               

               
Conread position:
               
163-509
               

               
Cow position:
               
chr17:30539061-30539379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
129, 62
               

               
Conread position:
               
163-509
               

               
Cow position:
               
chr17:33933511-33933869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
163-511
               

               
Cow position:
               
chr17:24883332-24883696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
70, 215
               

               
Conread position:
               
164-459
               

               
Cow position:
               
chr17:36864860-36864556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 222
               

               
Conread position:
               
164-499
               

               
Cow position:
               
chr17:7654252-7654568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
131, 65
               

               
Conread position:
               
164-502
               

               
Cow position:
               
chr17:32993390-32993734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
164-507
               

               
Cow position:
               
chr17:32989710-32989361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
165-370
               

               
Cow position:
               
chr17:12289010-12288805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
127, 67
               

               
Conread position:
               
165-371
               

               
Cow position:
               
chr17:7959415-7959190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 126
               

               
Conread position:
               
165-411
               

               
Cow position:
               
chr17:12959337-12959080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
165-441
               

               
Cow position:
               
chr17:29995199-29995493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
64, 228
               

               
Conread position:
               
165-500
               

               
Cow position:
               
chr17:1562555-1562887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
71, 144
               

               
Conread position:
               
166-261
               

               
Cow position:
               
chr17:24612880-24612785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
166-284
               

               
Cow position:
               
chr17:17757022-17757142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
166-291
               

               
Cow position:
               
chr17:42675805-42675935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
166-300
               

               
Cow position:
               
chr17:39759343-39759199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
166-327
               

               
Cow position:
               
chr17:24497374-24497209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
62, 104
               

               
Conread position:
               
166-334
               

               
Cow position:
               
chr17:10016512-10016326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
166-342
               

               
Cow position:
               
chr17:3182162-3182340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
166-342
               

               
Cow position:
               
chr17:21718762-21718958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
166-352
               

               
Cow position:
               
chr17:12019324-12019516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 113
               

               
Conread position:
               
166-353
               

               
Cow position:
               
chr17:946591-946385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
166-406
               

               
Cow position:
               
chr17:25473046-25473300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
68, 218
               

               
Conread position:
               
166-412
               

               
Cow position:
               
chr17:33164585-33164843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 157
               

               
Conread position:
               
166-417
               

               
Cow position:
               
chr17:32332857-32333125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
166-432
               

               
Cow position:
               
chr17:22051356-22051640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
68, 209
               

               
Conread position:
               
166-436
               

               
Cow position:
               
chr17:21039791-21039512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 210
               

               
Conread position:
               
166-449
               

               
Cow position:
               
chr17:1025599-1025885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 162
               

               
Conread position:
               
166-455
               

               
Cow position:
               
chr17:33793387-33793093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
166-462
               

               
Cow position:
               
chr17:9824902-9824591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 209
               

               
Conread position:
               
166-489
               

               
Cow position:
               
chr17:1040963-1040641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 200
               

               
Conread position:
               
166-491
               

               
Cow position:
               
chr17:40250645-40250320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 114
               

               
Conread position:
               
166-494
               

               
Cow position:
               
chr17:23563577-23563899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 209
               

               
Conread position:
               
166-494
               

               
Cow position:
               
chr17:29084402-29084079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr17:3577762-3577423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 93
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr17:8836716-8837068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr17:21003596-21003946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 116
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr17:24587858-24587503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 226
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr17:26818237-26818568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 109
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr17:32418882-32419233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 226
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr17:33288423-33288773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
67, 226
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr17:38362778-38363103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
166-503
               

               
Cow position:
               
chr17:27429791-27429462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
166-503
               

               
Cow position:
               
chr17:32349298-32348954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 143
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr17:908974-908620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 202
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr17:17059653-17059309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
61, 169
               

               
Conread position:
               
166-511
               

               
Cow position:
               
chr17:5224612-5224275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
166-511
               

               
Cow position:
               
chr17:22775605-22775249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
49, 222
               

               
Conread position:
               
167-352
               

               
Cow position:
               
chr17:9713128-9713313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
169-314
               

               
Cow position:
               
chr17:6101466-6101317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
169-366
               

               
Cow position:
               
chr17:42150620-42150406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
169-408
               

               
Cow position:
               
chr17:8815419-8815168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
84, 219
               

               
Conread position:
               
169-428
               

               
Cow position:
               
chr17:40412811-40412544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
67, 196
               

               
Conread position:
               
169-443
               

               
Cow position:
               
chr17:5372300-5372588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 211
               

               
Conread position:
               
169-499
               

               
Cow position:
               
chr17:24974175-24973839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
65, 227
               

               
Conread position:
               
169-502
               

               
Cow position:
               
chr17:4968315-4967995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
169-502
               

               
Cow position:
               
chr17:6318636-6318976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
57, 199
               

               
Conread position:
               
169-502
               

               
Cow position:
               
chr17:12447170-12447519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 90
               

               
Conread position:
               
169-507
               

               
Cow position:
               
chr17:5000369-5000702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
64, 167
               

               
Conread position:
               
170-315
               

               
Cow position:
               
chr17:33288260-33288413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
170-377
               

               
Cow position:
               
chr17:12556781-12556575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
203, 81
               

               
Conread position:
               
170-436
               

               
Cow position:
               
chr17:18934487-18934205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
170-463
               

               
Cow position:
               
chr17:1469597-1469298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
67, 132
               

               
Conread position:
               
171-502
               

               
Cow position:
               
chr17:11156278-11156608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
172-383
               

               
Cow position:
               
chr17:27665887-27666107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 148
               

               
Conread position:
               
173-331
               

               
Cow position:
               
chr17:12963386-12963557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
173-363
               

               
Cow position:
               
chr17:12342274-12342463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
115, 64
               

               
Conread position:
               
173-458
               

               
Cow position:
               
chr17:12510757-12511049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
173-473
               

               
Cow position:
               
chr17:25342512-25342829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 206
               

               
Conread position:
               
173-485
               

               
Cow position:
               
chr17:28284808-28285131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
173-500
               

               
Cow position:
               
chr17:1783398-1783722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
68, 95
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chr17:14004052-14003702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
25, 220
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chr17:20216376-20216050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chr17:32471560-32471909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 211
               

               
Conread position:
               
173-507
               

               
Cow position:
               
chr17:1063396-1063063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
173-507
               

               
Cow position:
               
chr17:3467979-3467643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
57, 201
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr17:30529319-30529669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 219
               

               
Conread position:
               
174-500
               

               
Cow position:
               
chr17:12536247-12536585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 217
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr17:5422851-5423188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 210
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr17:12325543-12325866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 197
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr17:23100995-23101326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
66, 205
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr17:24580087-24580415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
175-334
               

               
Cow position:
               
chr17:5027238-5027413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
55, 135
               

               
Conread position:
               
175-502
               

               
Cow position:
               
chr17:4299716-4300037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 150
               

               
Conread position:
               
176-489
               

               
Cow position:
               
chr17:21114730-21115055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 217
               

               
Conread position:
               
177-502
               

               
Cow position:
               
chr17:924085-923759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
177-502
               

               
Cow position:
               
chr17:4601337-4601663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
177-511
               

               
Cow position:
               
chr17:5688168-5688483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
180-489
               

               
Cow position:
               
chr17:40852189-40851878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
20, 167
               

               
Conread position:
               
194-502
               

               
Cow position:
               
chr17:15102703-15103003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
199-501
               

               
Cow position:
               
chr17:41891878-41892182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
208-502
               

               
Cow position:
               
chr17:6624422-6624139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
209-500
               

               
Cow position:
               
chr17:20848695-20848409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
215-507
               

               
Cow position:
               
chr17:39736343-39736059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
218-500
               

               
Cow position:
               
chr17:2662592-2662296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 155
               

               
Conread position:
               
220-347
               

               
Cow position:
               
chr17:30501647-30501781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
220-502
               

               
Cow position:
               
chr17:24824405-24824133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
221-503
               

               
Cow position:
               
chr17:979004-979275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
221-506
               

               
Cow position:
               
chr17:9565465-9565184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
224-403
               

               
Cow position:
               
chr17:11478929-11478748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
224-487
               

               
Cow position:
               
chr17:22806384-22806639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
226-347
               

               
Cow position:
               
chr17:42697451-42697328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
226-347
               

               
Cow position:
               
chr17:42744613-42744490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
226-506
               

               
Cow position:
               
chr17:18146343-18146063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 148
               

               
Conread position:
               
227-366
               

               
Cow position:
               
chr17:13236183-13236325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
227-387
               

               
Cow position:
               
chr17:21466105-21466266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 143
               

               
Conread position:
               
227-441
               

               
Cow position:
               
chr17:16158648-16158434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 147
               

               
Conread position:
               
227-465
               

               
Cow position:
               
chr17:38263330-38263567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 150
               

               
Conread position:
               
227-488
               

               
Cow position:
               
chr17:34751248-34751509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
10, 96
               

               
Conread position:
               
227-493
               

               
Cow position:
               
chr17:33657910-33658179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chr17:7698204-7697938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chr17:9117801-9117528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
24, 132
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chr17:24554154-24553889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 134
               

               
Conread position:
               
228-461
               

               
Cow position:
               
chr17:11368691-11368927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
230-502
               

               
Cow position:
               
chr17:267439-267707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
230-502
               

               
Cow position:
               
chr17:20992887-20993159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
233-345
               

               
Cow position:
               
chr17:3178310-3178424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
233-431
               

               
Cow position:
               
chr17:26575072-26575274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
18, 141
               

               
Conread position:
               
233-461
               

               
Cow position:
               
chr17:29026223-29025991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
233-463
               

               
Cow position:
               
chr17:1466266-1466508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
17, 159
               

               
Conread position:
               
233-501
               

               
Cow position:
               
chr17:18473314-18473062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
5, 82
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr17:1035446-1035716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
16, 142
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr17:9697531-9697817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 173
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr17:32278756-32279022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr17:32280816-32280550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
233-505
               

               
Cow position:
               
chr17:25594540-25594825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
233-507
               

               
Cow position:
               
chr17:17682761-17683024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
180, 60
               

               
Conread position:
               
233-509
               

               
Cow position:
               
chr17:13243899-13244163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
234-347
               

               
Cow position:
               
chr17:39485912-39485796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
235-384
               

               
Cow position:
               
chr17:43315140-43315288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
235-469
               

               
Cow position:
               
chr17:5850199-5850431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
235-470
               

               
Cow position:
               
chr17:21757992-21758224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 144
               

               
Conread position:
               
235-472
               

               
Cow position:
               
chr17:23516794-23517030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
235-485
               

               
Cow position:
               
chr17:14652631-14652881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 133
               

               
Conread position:
               
235-494
               

               
Cow position:
               
chr17:10458783-10459047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr17:5006339-5006606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr17:21292899-21293160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
222, 16
               

               
Conread position:
               
235-506
               

               
Cow position:
               
chr17:7810606-7810859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
16, 140
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chr17:4225355-4225617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chr17:5768053-5767788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
235-509
               

               
Cow position:
               
chr17:24559439-24559167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 151
               

               
Conread position:
               
236-330
               

               
Cow position:
               
chr17:25348516-25348419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
236-335
               

               
Cow position:
               
chr17:26833723-26833826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
236-340
               

               
Cow position:
               
chr17:24895221-24895114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
236-353
               

               
Cow position:
               
chr17:5743143-5743263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
236-355
               

               
Cow position:
               
chr17:18109401-18109523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
236-361
               

               
Cow position:
               
chr17:20392296-20392171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
236-366
               

               
Cow position:
               
chr17:29075936-29076068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
236-376
               

               
Cow position:
               
chr17:3097508-3097652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
236-389
               

               
Cow position:
               
chr17:21472041-21472184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
236-402
               

               
Cow position:
               
chr17:3388971-3388808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
236-403
               

               
Cow position:
               
chr17:24163184-24163020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
236-412
               

               
Cow position:
               
chr17:18766846-18767019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
236-449
               

               
Cow position:
               
chr17:34790916-34791131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
236-455
               

               
Cow position:
               
chr17:3153427-3153642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
236-465
               

               
Cow position:
               
chr17:3371764-3371553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
236-472
               

               
Cow position:
               
chr17:10431826-10432064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 141
               

               
Conread position:
               
236-483
               

               
Cow position:
               
chr17:26765171-26764918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
236-484
               

               
Cow position:
               
chr17:35573900-35573663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
236-486
               

               
Cow position:
               
chr17:21325480-21325231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 125
               

               
Conread position:
               
236-488
               

               
Cow position:
               
chr17:18495372-18495624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
236-491
               

               
Cow position:
               
chr17:265817-265570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
236-493
               

               
Cow position:
               
chr17:24751059-24750806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
236-493
               

               
Cow position:
               
chr17:35338773-35339024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
236-494
               

               
Cow position:
               
chr17:25513975-25514232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
236-494
               

               
Cow position:
               
chr17:30728652-30728412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
236-499
               

               
Cow position:
               
chr17:15340604-15340867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 135
               

               
Conread position:
               
236-499
               

               
Cow position:
               
chr17:25901348-25901081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 139
               

               
Conread position:
               
236-500
               

               
Cow position:
               
chr17:17060535-17060795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
52, 110
               

               
Conread position:
               
236-500
               

               
Cow position:
               
chr17:20780661-20780397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
236-500
               

               
Cow position:
               
chr17:31037229-31037497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr17:1060898-1061178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
15, 157
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr17:1410091-1410358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 142
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr17:11664434-11664707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 143
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr17:12591322-12591048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 153
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr17:17406283-17406023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 154
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr17:18108940-18109205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr17:24786876-24787136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr17:24822009-24821747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr17:25097602-25097344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
236-503
               

               
Cow position:
               
chr17:9911905-9911645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
236-506
               

               
Cow position:
               
chr17:30713491-30713224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr17:4105846-4106112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr17:4121582-4121848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr17:9746660-9746392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr17:20932479-20932203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 138
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr17:35126852-35126584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr17:40331912-40331639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
236-509
               

               
Cow position:
               
chr17:11215747-11216015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 75
               

               
Conread position:
               
236-509
               

               
Cow position:
               
chr17:20071951-20072207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
236-510
               

               
Cow position:
               
chr17:32138276-32138543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 139
               

               
Conread position:
               
237-369
               

               
Cow position:
               
chr17:11306356-11306221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
237-402
               

               
Cow position:
               
chr17:30213032-30212869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
237-415
               

               
Cow position:
               
chr17:40276887-40276700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
237-432
               

               
Cow position:
               
chr17:22016942-22017135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
237-494
               

               
Cow position:
               
chr17:25502257-25502000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
237-502
               

               
Cow position:
               
chr17:9854123-9853871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
237-507
               

               
Cow position:
               
chr17:29157563-29157293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
238-408
               

               
Cow position:
               
chr17:21053677-21053835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
238-418
               

               
Cow position:
               
chr17:28814347-28814533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
13, 143
               

               
Conread position:
               
238-430
               

               
Cow position:
               
chr17:37816049-37816236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
238-461
               

               
Cow position:
               
chr17:22056882-22057099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
238-461
               

               
Cow position:
               
chr17:25189431-25189211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
238-464
               

               
Cow position:
               
chr17:26231100-26230871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 137
               

               
Conread position:
               
238-464
               

               
Cow position:
               
chr17:27795799-27795567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
238-464
               

               
Cow position:
               
chr17:43141563-43141795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
9, 148
               

               
Conread position:
               
238-474
               

               
Cow position:
               
chr17:2275616-2275384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
238-477
               

               
Cow position:
               
chr17:5900515-5900274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 138
               

               
Conread position:
               
238-487
               

               
Cow position:
               
chr17:10561780-10561527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 83
               

               
Conread position:
               
238-489
               

               
Cow position:
               
chr17:11831969-11832224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
238-490
               

               
Cow position:
               
chr17:11215086-11215335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
238-491
               

               
Cow position:
               
chr17:21335546-21335801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 137
               

               
Conread position:
               
238-494
               

               
Cow position:
               
chr17:32366439-32366178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 104
               

               
Conread position:
               
238-500
               

               
Cow position:
               
chr17:32027306-32027575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
12, 137
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr17:6329261-6328993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr17:6848940-6848686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr17:7803029-7803290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
11, 143
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr17:8544450-8544187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr17:20990044-20990313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr17:21972984-21973252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr17:24077547-24077282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr17:30718272-30718538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr17:32273541-32273804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr17:11280954-11281233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
14, 94
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr17:12289263-12289541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 208
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr17:14025764-14026038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 125
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr17:20884669-20884397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr17:21738728-21739006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr17:28468268-28468010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
238-508
               

               
Cow position:
               
chr17:39857531-39857266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
238-509
               

               
Cow position:
               
chr17:21959542-21959815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 138
               

               
Conread position:
               
238-509
               

               
Cow position:
               
chr17:42419855-42419599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
238-511
               

               
Cow position:
               
chr17:38833189-38832916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
239-451
               

               
Cow position:
               
chr17:25032337-25032550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 145
               

               
Conread position:
               
239-476
               

               
Cow position:
               
chr17:21489481-21489716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 98
               

               
Conread position:
               
239-483
               

               
Cow position:
               
chr17:30665414-30665171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
239-500
               

               
Cow position:
               
chr17:8690307-8690559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr17:11172471-11172735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
53, 143
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr17:11618729-11618465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr17:12108949-12108686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr17:14033497-14033759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr17:18592587-18592325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
239-503
               

               
Cow position:
               
chr17:1114033-1113765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 135
               

               
Conread position:
               
239-507
               

               
Cow position:
               
chr17:18201901-18201639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 145
               

               
Conread position:
               
239-509
               

               
Cow position:
               
chr17:20874541-20874263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 118
               

               
Conread position:
               
240-500
               

               
Cow position:
               
chr17:8079456-8079201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
11, 119
               

               
Conread position:
               
240-507
               

               
Cow position:
               
chr17:27048299-27048033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
11, 132
               

               
Conread position:
               
241-511
               

               
Cow position:
               
chr17:17410435-17410159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 52
               

               
Conread position:
               
241-511
               

               
Cow position:
               
chr17:32017749-32018005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
242-415
               

               
Cow position:
               
chr17:18848017-18848190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
51, 132
               

               
Conread position:
               
242-453
               

               
Cow position:
               
chr17:40639088-40638881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
242-466
               

               
Cow position:
               
chr17:36275474-36275258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
242-472
               

               
Cow position:
               
chr17:27202904-27203132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 129
               

               
Conread position:
               
242-479
               

               
Cow position:
               
chr17:25718244-25718016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
50, 122
               

               
Conread position:
               
242-487
               

               
Cow position:
               
chr17:27058416-27058656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
57, 118
               

               
Conread position:
               
242-506
               

               
Cow position:
               
chr17:21495513-21495253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
242-509
               

               
Cow position:
               
chr17:3503723-3503454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
243-406
               

               
Cow position:
               
chr17:22048647-22048811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
8, 137
               

               
Conread position:
               
243-449
               

               
Cow position:
               
chr17:14848405-14848602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 55
               

               
Conread position:
               
244-488
               

               
Cow position:
               
chr17:15333574-15333816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
246-506
               

               
Cow position:
               
chr17:26000254-25999995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
248-486
               

               
Cow position:
               
chr17:23798415-23798179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
250-367
               

               
Cow position:
               
chr17:565245-565364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
253-502
               

               
Cow position:
               
chr17:31230993-31231230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
237, 42
               

               
Conread position:
               
253-509
               

               
Cow position:
               
chr17:38647191-38646932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
254-502
               

               
Cow position:
               
chr17:3782172-3781926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
254-502
               

               
Cow position:
               
chr17:20090508-20090740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 124
               

               
Conread position:
               
257-368
               

               
Cow position:
               
chr17:32192727-32192841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
258-494
               

               
Cow position:
               
chr17:10528603-10528847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
258-502
               

               
Cow position:
               
chr17:37481944-37482192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 135
               

               
Conread position:
               
259-494
               

               
Cow position:
               
chr17:23063843-23063602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
264-502
               

               
Cow position:
               
chr17:14762003-14762238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
265-507
               

               
Cow position:
               
chr17:21628596-21628356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
266-457
               

               
Cow position:
               
chr17:21478805-21478995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
266-502
               

               
Cow position:
               
chr17:34596057-34595825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
266-511
               

               
Cow position:
               
chr17:28540145-28539899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
136, 105
               

               
Conread position:
               
267-486
               

               
Cow position:
               
chr17:24490657-24490423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr17:33410893-33411132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr17:38615076-38614846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
267-500
               

               
Cow position:
               
chr17:7137095-7136865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
268-502
               

               
Cow position:
               
chr17:1275638-1275405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
269-509
               

               
Cow position:
               
chr17:21917759-21918001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
271-507
               

               
Cow position:
               
chr17:25541705-25541939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 107
               

               
Conread position:
               
272-502
               

               
Cow position:
               
chr17:27183832-27184059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
273-502
               

               
Cow position:
               
chr17:7132329-7132570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
285-509
               

               
Cow position:
               
chr17:5733371-5733580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
295-502
               

               
Cow position:
               
chr17:12059007-12059210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
113, 27
               

               
Conread position:
               
296-507
               

               
Cow position:
               
chr17:20870013-20870224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 40
               

               
Conread position:
               
301-444
               

               
Cow position:
               
chr17:20269816-20269671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
303-487
               

               
Cow position:
               
chr17:32009362-32009540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
308-491
               

               
Cow position:
               
chr17:1311423-1311241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
310-500
               

               
Cow position:
               
chr17:10510586-10510775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
311-500
               

               
Cow position:
               
chr17:3471489-3471303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 47
               

               
Conread position:
               
312-500
               

               
Cow position:
               
chr17:33290741-33290930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
318-502
               

               
Cow position:
               
chr17:21207078-21207250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
318-502
               

               
Cow position:
               
chr17:27306223-27306043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 54
               

               
Conread position:
               
318-509
               

               
Cow position:
               
chr17:27765337-27765149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
319-502
               

               
Cow position:
               
chr17:34207753-34207935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
93, 57
               

               
Conread position:
               
319-507
               

               
Cow position:
               
chr17:13143626-13143816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 45
               

               
Conread position:
               
323-489
               

               
Cow position:
               
chr17:44561016-44561185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
327-494
               

               
Cow position:
               
chr17:11921220-11921392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
350-501
               

               
Cow position:
               
chr17:4436200-4436349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
358-502
               

               
Cow position:
               
chr17:12216047-12216192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
365-502
               

               
Cow position:
               
chr17:11056348-11056490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
368-511
               

               
Cow position:
               
chr17:5895891-5896041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
377-500
               

               
Cow position:
               
chr17:43634116-43633995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
381-502
               

               
Cow position:
               
chr17:21017802-21017679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
406-507
               

               
Cow position:
               
chr17:3182606-3182710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               
Show alignments to all cow chromosomes.