Cow genome map

Conread name: Pla1-C0000039_N19

Conread position: 80-465
Cow position: chr20:7737902-7738305 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 46

Conread position: 81-374
Cow position: chr20:24097318-24097010 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 20

Conread position: 142-487
Cow position: chr20:3255293-3254952 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 13

Conread position: 144-451
Cow position: chr20:6903553-6903252 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 107, 61

Conread position: 147-483
Cow position: chr20:35710413-35710075 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 15

Conread position: 152-502
Cow position: chr20:8262146-8261794 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 47

Conread position: 153-367
Cow position: chr20:3148931-3148700 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 56

Conread position: 153-494
Cow position: chr20:33532540-33532200 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 73, 212

Conread position: 154-502
Cow position: chr20:32083851-32084198 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 19

Conread position: 155-461
Cow position: chr20:28818688-28819005 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 218
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 131

Conread position: 155-489
Cow position: chr20:12420371-12420721 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 248

Conread position: 155-500
Cow position: chr20:1640219-1640558 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 90, 131

Conread position: 155-500
Cow position: chr20:4206205-4205852 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 109, 37

Conread position: 156-446
Cow position: chr20:4786785-4787074 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 125

Conread position: 157-502
Cow position: chr20:747178-746831 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 207

Conread position: 160-472
Cow position: chr20:26077449-26077743 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 28

Conread position: 160-473
Cow position: chr20:11135509-11135844 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 227

Conread position: 160-500
Cow position: chr20:21929137-21928789 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 76, 218

Conread position: 161-466
Cow position: chr20:38868862-38868564 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 76, 12

Conread position: 161-487
Cow position: chr20:28982940-28982598 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 162

Conread position: 161-502
Cow position: chr20:6257833-6258177 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 14

Conread position: 161-506
Cow position: chr20:17251960-17251588 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 260
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 76, 7

Conread position: 162-502
Cow position: chr20:14880027-14879673 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 228

Conread position: 162-502
Cow position: chr20:28441559-28441213 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 11

Conread position: 162-506
Cow position: chr20:40511531-40511881 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 193

Conread position: 163-336
Cow position: chr20:21902043-21901874 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 72, 11

Conread position: 163-355
Cow position: chr20:36312272-36312480 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 8

Conread position: 163-406
Cow position: chr20:42166549-42166800 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 45

Conread position: 163-416
Cow position: chr20:13034093-13034353 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 163-440
Cow position: chr20:9376702-9376415 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 55

Conread position: 163-486
Cow position: chr20:18379617-18379282 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 70, 139

Conread position: 163-500
Cow position: chr20:29805438-29805773 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 229
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 88, 11

Conread position: 163-502
Cow position: chr20:14759434-14759777 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 240
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 68, 212

Conread position: 163-502
Cow position: chr20:14980267-14980628 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 71, 232

Conread position: 163-502
Cow position: chr20:22065300-22064955 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 71, 10

Conread position: 163-502
Cow position: chr20:23846426-23846785 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 10

Conread position: 163-502
Cow position: chr20:32847582-32847239 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 231

Conread position: 163-502
Cow position: chr20:40257190-40256851 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 225
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 97, 136

Conread position: 163-509
Cow position: chr20:38818229-38817880 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 63, 158

Conread position: 165-291
Cow position: chr20:38061535-38061672 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 165-324
Cow position: chr20:13617449-13617285 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 165-500
Cow position: chr20:34596865-34597214 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 231
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 28, 221

Conread position: 166-324
Cow position: chr20:35201594-35201757 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 166-347
Cow position: chr20:19635941-19636140 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 165
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 166-355
Cow position: chr20:3564390-3564188 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 156

Conread position: 166-363
Cow position: chr20:33623322-33623532 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 109

Conread position: 166-370
Cow position: chr20:10788676-10788877 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 166-388
Cow position: chr20:20158368-20158131 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 70, 0

Conread position: 166-416
Cow position: chr20:25351189-25351437 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 131

Conread position: 166-453
Cow position: chr20:7624022-7624313 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 215

Conread position: 166-461
Cow position: chr20:11548491-11548797 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 66, 154

Conread position: 166-462
Cow position: chr20:21204570-21204284 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 66

Conread position: 166-471
Cow position: chr20:5645013-5644702 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 71, 122

Conread position: 166-481
Cow position: chr20:23540934-23541252 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 66, 29

Conread position: 166-494
Cow position: chr20:3599165-3599498 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 69, 33

Conread position: 166-500
Cow position: chr20:12581719-12582062 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 225

Conread position: 166-500
Cow position: chr20:22235536-22235200 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 209

Conread position: 166-501
Cow position: chr20:11741079-11741416 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 183

Conread position: 166-501
Cow position: chr20:23792832-23792495 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 11

Conread position: 166-502
Cow position: chr20:7438620-7438969 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 222

Conread position: 166-502
Cow position: chr20:8308241-8307900 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 145

Conread position: 166-502
Cow position: chr20:8556033-8556387 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 208

Conread position: 166-502
Cow position: chr20:10209044-10208689 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 67, 117

Conread position: 166-502
Cow position: chr20:25009396-25009756 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 204

Conread position: 166-504
Cow position: chr20:6240283-6240640 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 219

Conread position: 166-506
Cow position: chr20:8702693-8703031 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 62

Conread position: 166-507
Cow position: chr20:7658988-7659339 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 218

Conread position: 166-507
Cow position: chr20:14572140-14572480 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 104

Conread position: 166-507
Cow position: chr20:14807120-14806762 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 221

Conread position: 166-507
Cow position: chr20:18618835-18618514 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 30

Conread position: 166-507
Cow position: chr20:33434922-33435291 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 70, 50

Conread position: 166-509
Cow position: chr20:35365255-35364921 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 32

Conread position: 167-423
Cow position: chr20:12126065-12126339 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 230

Conread position: 169-356
Cow position: chr20:39268848-39269058 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 169-483
Cow position: chr20:23103426-23103123 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 161, 73

Conread position: 169-502
Cow position: chr20:13269848-13269510 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 60, 136

Conread position: 169-502
Cow position: chr20:19363153-19363481 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 39

Conread position: 169-507
Cow position: chr20:24070036-24069682 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 220

Conread position: 171-489
Cow position: chr20:31081253-31080939 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 165

Conread position: 172-336
Cow position: chr20:26905893-26905722 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 172-461
Cow position: chr20:30119361-30119648 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 23

Conread position: 172-507
Cow position: chr20:2298564-2298901 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 196

Conread position: 173-408
Cow position: chr20:18423905-18423678 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 14

Conread position: 173-461
Cow position: chr20:35192989-35192703 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 85, 19

Conread position: 173-501
Cow position: chr20:25686136-25686463 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 78, 55

Conread position: 173-502
Cow position: chr20:7425968-7426302 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 211

Conread position: 173-502
Cow position: chr20:14917501-14917183 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 198

Conread position: 173-502
Cow position: chr20:15312881-15312546 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 55, 28

Conread position: 173-502
Cow position: chr20:29755008-29754671 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 129

Conread position: 173-502
Cow position: chr20:35146244-35145896 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 236
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 209

Conread position: 173-507
Cow position: chr20:4334308-4334644 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 212

Conread position: 173-507
Cow position: chr20:8547290-8546944 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 20

Conread position: 173-507
Cow position: chr20:11550575-11550243 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 64

Conread position: 173-507
Cow position: chr20:13752443-13752116 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 22

Conread position: 174-354
Cow position: chr20:10236047-10235862 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 171

Conread position: 174-395
Cow position: chr20:5702951-5702716 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 44, 211

Conread position: 174-471
Cow position: chr20:22265038-22265330 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 166

Conread position: 174-502
Cow position: chr20:15568734-15569063 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 18

Conread position: 174-502
Cow position: chr20:25161902-25162245 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 36

Conread position: 174-507
Cow position: chr20:28605435-28605081 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 213

Conread position: 175-425
Cow position: chr20:14620078-14620347 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 207

Conread position: 175-502
Cow position: chr20:19237299-19236961 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 181

Conread position: 175-509
Cow position: chr20:20967547-20967209 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 215

Conread position: 176-455
Cow position: chr20:33067132-33067432 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 223

Conread position: 176-463
Cow position: chr20:34001190-34001469 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 114, 56

Conread position: 177-337
Cow position: chr20:20590078-20590255 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 178-476
Cow position: chr20:398087-398392 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 192

Conread position: 178-502
Cow position: chr20:9433807-9433471 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 57, 201

Conread position: 178-507
Cow position: chr20:30817746-30817413 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 217
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 140

Conread position: 179-494
Cow position: chr20:6603255-6602932 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 63, 20

Conread position: 180-472
Cow position: chr20:6424177-6423886 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 140

Conread position: 191-507
Cow position: chr20:13967070-13967382 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 48, 83

Conread position: 193-502
Cow position: chr20:28067230-28067543 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 38, 12

Conread position: 198-374
Cow position: chr20:3351081-3350910 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 72

Conread position: 199-461
Cow position: chr20:16492259-16491997 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 26

Conread position: 199-507
Cow position: chr20:11188610-11188926 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 125

Conread position: 209-507
Cow position: chr20:35797787-35797487 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 32, 101

Conread position: 215-494
Cow position: chr20:36207987-36207698 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 178

Conread position: 217-507
Cow position: chr20:13025441-13025734 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 33, 161

Conread position: 218-509
Cow position: chr20:35906883-35907177 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 13

Conread position: 220-488
Cow position: chr20:11542121-11542385 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 125

Conread position: 220-502
Cow position: chr20:26996694-26996417 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 16

Conread position: 220-502
Cow position: chr20:38578598-38578874 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 100

Conread position: 220-503
Cow position: chr20:16935150-16935417 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 31, 16

Conread position: 222-494
Cow position: chr20:34221640-34221372 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 9

Conread position: 224-502
Cow position: chr20:38551525-38551258 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 7

Conread position: 225-352
Cow position: chr20:630685-630556 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 101

Conread position: 225-366
Cow position: chr20:15766273-15766128 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 136

Conread position: 225-380
Cow position: chr20:11392939-11392781 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 120

Conread position: 225-427
Cow position: chr20:2169560-2169762 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 114

Conread position: 225-488
Cow position: chr20:34901723-34901467 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 183, 23

Conread position: 226-502
Cow position: chr20:40446489-40446214 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 95

Conread position: 227-341
Cow position: chr20:19834668-19834788 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 227-451
Cow position: chr20:20056327-20056549 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 130

Conread position: 227-481
Cow position: chr20:41883891-41883641 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 62

Conread position: 227-500
Cow position: chr20:20203374-20203101 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 18

Conread position: 227-502
Cow position: chr20:17846119-17845846 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 94

Conread position: 227-502
Cow position: chr20:30710476-30710763 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 140

Conread position: 227-505
Cow position: chr20:33438821-33439091 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 133

Conread position: 227-511
Cow position: chr20:21019731-21019436 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 31, 121

Conread position: 228-460
Cow position: chr20:33976640-33976408 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 8, 68

Conread position: 228-509
Cow position: chr20:32988662-32988962 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 105

Conread position: 229-461
Cow position: chr20:38670907-38670684 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 22, 147

Conread position: 229-511
Cow position: chr20:31740062-31740346 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 41

Conread position: 229-511
Cow position: chr20:40185515-40185804 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 202

Conread position: 231-427
Cow position: chr20:22000156-21999957 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 61, 75

Conread position: 231-502
Cow position: chr20:39743465-39743202 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 163

Conread position: 233-440
Cow position: chr20:10772358-10772150 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 18, 141

Conread position: 233-476
Cow position: chr20:15822699-15822462 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 18, 32

Conread position: 233-502
Cow position: chr20:40450174-40449893 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 102

Conread position: 233-506
Cow position: chr20:38768310-38768576 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 80

Conread position: 234-484
Cow position: chr20:34786796-34787041 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 16, 65

Conread position: 235-355
Cow position: chr20:39155564-39155443 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 235-371
Cow position: chr20:35444952-35445091 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 235-374
Cow position: chr20:8912347-8912490 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 235-464
Cow position: chr20:31289656-31289428 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 39

Conread position: 235-494
Cow position: chr20:39266807-39267067 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 84

Conread position: 235-500
Cow position: chr20:21714919-21714637 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 149

Conread position: 235-502
Cow position: chr20:7363113-7362852 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 235-502
Cow position: chr20:7756474-7756746 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 68

Conread position: 235-502
Cow position: chr20:33144402-33144672 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 139

Conread position: 235-505
Cow position: chr20:1139617-1139895 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 138

Conread position: 235-509
Cow position: chr20:8098437-8098156 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 134

Conread position: 235-509
Cow position: chr20:19459514-19459782 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 15, 141

Conread position: 236-359
Cow position: chr20:23358345-23358467 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 67

Conread position: 236-383
Cow position: chr20:15530010-15529861 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 236-400
Cow position: chr20:11043324-11043489 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 15, 72

Conread position: 236-416
Cow position: chr20:21815711-21815531 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 15, 124

Conread position: 236-417
Cow position: chr20:19060689-19060868 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 71

Conread position: 236-444
Cow position: chr20:38514928-38514724 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 27

Conread position: 236-449
Cow position: chr20:22030468-22030258 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 58, 6

Conread position: 236-457
Cow position: chr20:11359482-11359694 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 102

Conread position: 236-462
Cow position: chr20:5078777-5078548 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 15, 141

Conread position: 236-486
Cow position: chr20:580770-581021 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 15, 138

Conread position: 236-494
Cow position: chr20:12239533-12239784 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 71

Conread position: 236-494
Cow position: chr20:22978477-22978213 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 15, 138

Conread position: 236-500
Cow position: chr20:35408001-35407748 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 83

Conread position: 236-501
Cow position: chr20:2819693-2819427 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 118

Conread position: 236-502
Cow position: chr20:5636631-5636367 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 136

Conread position: 236-502
Cow position: chr20:5827090-5826824 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 15, 99

Conread position: 236-502
Cow position: chr20:8578399-8578131 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 143

Conread position: 236-502
Cow position: chr20:20242234-20241983 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 70

Conread position: 236-502
Cow position: chr20:32463374-32463638 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 83

Conread position: 236-503
Cow position: chr20:40692214-40691939 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 181
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 236-507
Cow position: chr20:5998515-5998788 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 11, 140

Conread position: 236-507
Cow position: chr20:9412638-9412368 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 140

Conread position: 236-507
Cow position: chr20:40177395-40177126 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 16, 127

Conread position: 237-457
Cow position: chr20:38090062-38089841 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 142

Conread position: 237-471
Cow position: chr20:8620001-8620235 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 56, 17

Conread position: 237-500
Cow position: chr20:33363666-33363403 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 138

Conread position: 238-342
Cow position: chr20:26040950-26041057 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 94
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 238-375
Cow position: chr20:23678567-23678707 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 131

Conread position: 238-425
Cow position: chr20:40158048-40157862 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 136

Conread position: 238-432
Cow position: chr20:24902145-24902344 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 132

Conread position: 238-451
Cow position: chr20:354753-354961 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 58

Conread position: 238-453
Cow position: chr20:16941140-16941356 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 86

Conread position: 238-461
Cow position: chr20:11008318-11008094 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 128

Conread position: 238-482
Cow position: chr20:12430653-12430891 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 238-486
Cow position: chr20:13983504-13983263 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 125

Conread position: 238-488
Cow position: chr20:19751455-19751206 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 13, 124

Conread position: 238-489
Cow position: chr20:39417755-39418002 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 11, 83

Conread position: 238-492
Cow position: chr20:42458708-42458955 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 121

Conread position: 238-500
Cow position: chr20:6096347-6096606 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 13, 128

Conread position: 238-500
Cow position: chr20:9266959-9267212 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 31

Conread position: 238-500
Cow position: chr20:9537280-9537019 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 58

Conread position: 238-500
Cow position: chr20:20099452-20099708 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 13, 110

Conread position: 238-500
Cow position: chr20:41089647-41089905 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 72

Conread position: 238-501
Cow position: chr20:23870671-23870928 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 14, 99

Conread position: 238-502
Cow position: chr20:4945106-4945363 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 57

Conread position: 238-502
Cow position: chr20:5814714-5814457 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 75

Conread position: 238-502
Cow position: chr20:6054361-6054635 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 11, 137

Conread position: 238-502
Cow position: chr20:7211182-7210923 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 13, 36

Conread position: 238-502
Cow position: chr20:15565681-15565944 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 13, 120

Conread position: 238-502
Cow position: chr20:18320646-18320908 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 71

Conread position: 238-502
Cow position: chr20:22959200-22959459 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 39

Conread position: 238-502
Cow position: chr20:34097805-34098075 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 11, 140

Conread position: 238-502
Cow position: chr20:36633960-36633700 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 13, 76

Conread position: 238-502
Cow position: chr20:39518154-39517890 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 55, 125

Conread position: 238-502
Cow position: chr20:42469907-42469646 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 13, 65

Conread position: 238-507
Cow position: chr20:4332282-4332014 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 8, 127

Conread position: 238-507
Cow position: chr20:23064687-23064953 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 13, 58

Conread position: 238-509
Cow position: chr20:29845198-29844925 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 51, 141

Conread position: 238-510
Cow position: chr20:24000650-24000923 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 12

Conread position: 238-511
Cow position: chr20:3320996-3321266 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 71

Conread position: 238-511
Cow position: chr20:22485007-22484732 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 13, 83

Conread position: 238-511
Cow position: chr20:36040623-36040347 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 138

Conread position: 238-511
Cow position: chr20:39398629-39398359 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 122

Conread position: 239-385
Cow position: chr20:8817344-8817495 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 124
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 239-423
Cow position: chr20:6358767-6358578 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 156

Conread position: 239-456
Cow position: chr20:6248454-6248665 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 136

Conread position: 239-458
Cow position: chr20:21345580-21345357 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 139

Conread position: 239-466
Cow position: chr20:32709298-32709529 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 15, 114

Conread position: 239-502
Cow position: chr20:3141720-3141466 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 128

Conread position: 239-503
Cow position: chr20:40782108-40781851 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 138

Conread position: 239-511
Cow position: chr20:14433275-14433556 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 54, 156

Conread position: 240-426
Cow position: chr20:39212435-39212621 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 80

Conread position: 240-489
Cow position: chr20:24711987-24711732 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 145

Conread position: 240-494
Cow position: chr20:36010941-36010685 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 105

Conread position: 240-502
Cow position: chr20:28296441-28296174 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 125

Conread position: 241-479
Cow position: chr20:30888180-30887940 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 132

Conread position: 241-494
Cow position: chr20:7441991-7442234 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 65

Conread position: 241-500
Cow position: chr20:37165852-37165611 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 17

Conread position: 242-460
Cow position: chr20:17100506-17100287 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 9, 127

Conread position: 242-472
Cow position: chr20:32866050-32866273 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 47

Conread position: 242-500
Cow position: chr20:10818096-10818338 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 9, 156

Conread position: 242-500
Cow position: chr20:12995862-12996123 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 9, 42

Conread position: 242-511
Cow position: chr20:41627196-41627477 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 87

Conread position: 243-465
Cow position: chr20:16548136-16548355 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 50, 131

Conread position: 243-486
Cow position: chr20:23286192-23286423 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 8, 74

Conread position: 248-397
Cow position: chr20:1009569-1009715 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 110

Conread position: 248-457
Cow position: chr20:23506334-23506540 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 9

Conread position: 249-507
Cow position: chr20:28955565-28955823 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 44, 125

Conread position: 255-502
Cow position: chr20:11482005-11482252 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 5

Conread position: 256-507
Cow position: chr20:26077211-26076960 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 85

Conread position: 258-494
Cow position: chr20:3606834-3607064 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 46

Conread position: 260-507
Cow position: chr20:15548771-15549018 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 104

Conread position: 261-503
Cow position: chr20:22313036-22313276 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 31, 112

Conread position: 266-487
Cow position: chr20:13821461-13821683 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 12

Conread position: 266-488
Cow position: chr20:32523583-32523358 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 108

Conread position: 267-445
Cow position: chr20:16818537-16818357 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 107

Conread position: 267-491
Cow position: chr20:19616610-19616381 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 109

Conread position: 267-494
Cow position: chr20:3739886-3740108 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 116

Conread position: 269-485
Cow position: chr20:15118392-15118177 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 93

Conread position: 288-502
Cow position: chr20:23505923-23505715 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 124, 61

Conread position: 290-456
Cow position: chr20:7384171-7384342 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 135, 42

Conread position: 291-465
Cow position: chr20:17530321-17530494 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 19

Conread position: 291-478
Cow position: chr20:32830331-32830149 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 12

Conread position: 291-502
Cow position: chr20:39019788-39019578 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 89, 65

Conread position: 295-502
Cow position: chr20:14735757-14735559 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 117, 70

Conread position: 295-502
Cow position: chr20:35958736-35958528 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 113, 77

Conread position: 296-495
Cow position: chr20:282838-283034 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 116, 78

Conread position: 298-485
Cow position: chr20:28804655-28804464 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 71, 148

Conread position: 299-509
Cow position: chr20:10348835-10348620 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 73

Conread position: 301-494
Cow position: chr20:19146959-19146766 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 72

Conread position: 301-500
Cow position: chr20:22704377-22704177 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 107, 75

Conread position: 310-502
Cow position: chr20:18837078-18837273 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 319-488
Cow position: chr20:27003660-27003836 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 319-494
Cow position: chr20:28832035-28831860 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 45

Conread position: 320-507
Cow position: chr20:20312684-20312870 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 50

Conread position: 327-502
Cow position: chr20:37272771-37272597 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 38

Conread position: 334-489
Cow position: chr20:3781374-3781529 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 68, 39

Conread position: 334-502
Cow position: chr20:27340112-27339948 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 76, 38

Conread position: 350-472
Cow position: chr20:39154824-39154703 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 60, 31

Conread position: 363-489
Cow position: chr20:36331398-36331527 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 368-502
Cow position: chr20:22445616-22445752 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 14, 82

Conread position: 381-511
Cow position: chr20:11923235-11923371 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 405-507
Cow position: chr20:41119893-41119791 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 68

Show alignments to all cow chromosomes.