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Cow genome map

           
Conread name:
           
Pla1-C0000039_N19
        

               
Conread position:
               
80-502
               

               
Cow position:
               
chr3:5365920-5365488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
80-502
               

               
Cow position:
               
chr3:14599180-14598767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
110, 21
               

               
Conread position:
               
112-328
               

               
Cow position:
               
chr3:32127190-32127417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
123-485
               

               
Cow position:
               
chr3:76267762-76268146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
143-287
               

               
Cow position:
               
chr3:15689162-15689311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 66
               

               
Conread position:
               
143-509
               

               
Cow position:
               
chr3:28908023-28908391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 236
               

               
Conread position:
               
145-396
               

               
Cow position:
               
chr3:41550204-41550452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
144, 8
               

               
Conread position:
               
146-502
               

               
Cow position:
               
chr3:64280748-64281115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 239
               

               
Conread position:
               
152-291
               

               
Cow position:
               
chr3:59635487-59635339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
152-385
               

               
Cow position:
               
chr3:51349982-51349753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
152-419
               

               
Cow position:
               
chr3:56483685-56483414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 73
               

               
Conread position:
               
153-378
               

               
Cow position:
               
chr3:71703641-71703416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
153-418
               

               
Cow position:
               
chr3:15173247-15172980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
153-449
               

               
Cow position:
               
chr3:51403079-51402779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
47, 180
               

               
Conread position:
               
153-472
               

               
Cow position:
               
chr3:46541667-46541980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
153-477
               

               
Cow position:
               
chr3:61323001-61322688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
153-494
               

               
Cow position:
               
chr3:55819931-55819573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
153-502
               

               
Cow position:
               
chr3:45647849-45647497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
153-507
               

               
Cow position:
               
chr3:34669580-34669918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr3:44960837-44961051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
154-408
               

               
Cow position:
               
chr3:71474225-71474495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
79, 230
               

               
Conread position:
               
154-502
               

               
Cow position:
               
chr3:2392787-2393145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 159
               

               
Conread position:
               
155-375
               

               
Cow position:
               
chr3:71423388-71423610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
155-502
               

               
Cow position:
               
chr3:12705367-12705729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
155-508
               

               
Cow position:
               
chr3:66975066-66975433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
155-509
               

               
Cow position:
               
chr3:10958063-10958425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
156-472
               

               
Cow position:
               
chr3:55177571-55177905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 240
               

               
Conread position:
               
157-511
               

               
Cow position:
               
chr3:75158534-75158167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
160-335
               

               
Cow position:
               
chr3:50350802-50350988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
160-366
               

               
Cow position:
               
chr3:29827991-29828198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
90, 74
               

               
Conread position:
               
160-502
               

               
Cow position:
               
chr3:20802465-20802813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
161-425
               

               
Cow position:
               
chr3:22165241-22165523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
161-477
               

               
Cow position:
               
chr3:15153862-15153535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
161-487
               

               
Cow position:
               
chr3:2199039-2198715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
90, 67
               

               
Conread position:
               
161-502
               

               
Cow position:
               
chr3:13577044-13577369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
90, 126
               

               
Conread position:
               
161-502
               

               
Cow position:
               
chr3:51578150-51578502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
161-502
               

               
Cow position:
               
chr3:55318724-55319086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
161-502
               

               
Cow position:
               
chr3:55712605-55712246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 7
               

               
Conread position:
               
161-502
               

               
Cow position:
               
chr3:74533509-74533169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 208
               

               
Conread position:
               
161-503
               

               
Cow position:
               
chr3:53836536-53836869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
161-507
               

               
Cow position:
               
chr3:2630935-2630604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
65, 35
               

               
Conread position:
               
161-509
               

               
Cow position:
               
chr3:68145680-68146032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
95, 38
               

               
Conread position:
               
162-408
               

               
Cow position:
               
chr3:49363281-49363028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 212
               

               
Conread position:
               
163-354
               

               
Cow position:
               
chr3:52845728-52845512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:8349398-8349612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
163-374
               

               
Cow position:
               
chr3:31804597-31804826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 109
               

               
Conread position:
               
163-439
               

               
Cow position:
               
chr3:15950745-15951031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
163-449
               

               
Cow position:
               
chr3:60389925-60389638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
44, 211
               

               
Conread position:
               
163-461
               

               
Cow position:
               
chr3:17331892-17331585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 55
               

               
Conread position:
               
163-461
               

               
Cow position:
               
chr3:20993968-20993670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
163-461
               

               
Cow position:
               
chr3:73237356-73237053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 217
               

               
Conread position:
               
163-461
               

               
Cow position:
               
chr3:76156159-76155846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 192
               

               
Conread position:
               
163-464
               

               
Cow position:
               
chr3:59474293-59473978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
63, 225
               

               
Conread position:
               
163-465
               

               
Cow position:
               
chr3:3883647-3883964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 119
               

               
Conread position:
               
163-476
               

               
Cow position:
               
chr3:58764913-58765233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
66, 211
               

               
Conread position:
               
163-483
               

               
Cow position:
               
chr3:75480171-75479839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 161
               

               
Conread position:
               
163-486
               

               
Cow position:
               
chr3:25477965-25477650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 159
               

               
Conread position:
               
163-491
               

               
Cow position:
               
chr3:14553044-14552707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
163-494
               

               
Cow position:
               
chr3:19793070-19792718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
163-494
               

               
Cow position:
               
chr3:67744468-67744797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chr3:5374482-5374154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chr3:39969691-39970051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chr3:53790370-53790720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
163-507
               

               
Cow position:
               
chr3:3985489-3985140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 167
               

               
Conread position:
               
163-507
               

               
Cow position:
               
chr3:18687074-18686717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
65, 209
               

               
Conread position:
               
163-509
               

               
Cow position:
               
chr3:15057469-15057794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
127, 79
               

               
Conread position:
               
164-374
               

               
Cow position:
               
chr3:18001358-18001140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
165-310
               

               
Cow position:
               
chr3:25082266-25082412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 60
               

               
Conread position:
               
165-324
               

               
Cow position:
               
chr3:74069745-74069590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
165-338
               

               
Cow position:
               
chr3:31115107-31115292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
165-371
               

               
Cow position:
               
chr3:3947207-3946983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
165-406
               

               
Cow position:
               
chr3:10591342-10591603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
56, 237
               

               
Conread position:
               
165-502
               

               
Cow position:
               
chr3:44932683-44932329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 132
               

               
Conread position:
               
165-502
               

               
Cow position:
               
chr3:49328105-49327758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
165-502
               

               
Cow position:
               
chr3:82019671-82020023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
61, 246
               

               
Conread position:
               
166-285
               

               
Cow position:
               
chr3:24370561-24370434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
166-315
               

               
Cow position:
               
chr3:77654090-77653929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 157
               

               
Conread position:
               
166-324
               

               
Cow position:
               
chr3:3818934-3818776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
166-342
               

               
Cow position:
               
chr3:67407197-67407392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
166-347
               

               
Cow position:
               
chr3:75107942-75107743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
166-356
               

               
Cow position:
               
chr3:10733048-10732850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
166-369
               

               
Cow position:
               
chr3:8540671-8540470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
166-375
               

               
Cow position:
               
chr3:23131998-23132228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
166-378
               

               
Cow position:
               
chr3:75173430-75173643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
166-402
               

               
Cow position:
               
chr3:76270058-76269816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 121
               

               
Conread position:
               
166-403
               

               
Cow position:
               
chr3:478654-478882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
127, 50
               

               
Conread position:
               
166-403
               

               
Cow position:
               
chr3:10668709-10668961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 163
               

               
Conread position:
               
166-406
               

               
Cow position:
               
chr3:39873538-39873782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 95
               

               
Conread position:
               
166-408
               

               
Cow position:
               
chr3:4549187-4548928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
166-412
               

               
Cow position:
               
chr3:75608658-75608406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
72, 155
               

               
Conread position:
               
166-424
               

               
Cow position:
               
chr3:44625009-44625268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
166-426
               

               
Cow position:
               
chr3:31361593-31361312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 195
               

               
Conread position:
               
166-428
               

               
Cow position:
               
chr3:57704502-57704214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 146
               

               
Conread position:
               
166-445
               

               
Cow position:
               
chr3:59605012-59604725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 159
               

               
Conread position:
               
166-447
               

               
Cow position:
               
chr3:64135867-64135589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
166-448
               

               
Cow position:
               
chr3:54739730-54740017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
166-449
               

               
Cow position:
               
chr3:11276430-11276700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
166-449
               

               
Cow position:
               
chr3:58131142-58130866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 62
               

               
Conread position:
               
166-460
               

               
Cow position:
               
chr3:74584360-74584077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 200
               

               
Conread position:
               
166-465
               

               
Cow position:
               
chr3:18426530-18426845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
71, 205
               

               
Conread position:
               
166-465
               

               
Cow position:
               
chr3:75104946-75105230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
252, 29
               

               
Conread position:
               
166-483
               

               
Cow position:
               
chr3:29359994-29360303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 37
               

               
Conread position:
               
166-486
               

               
Cow position:
               
chr3:59610549-59610887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 226
               

               
Conread position:
               
166-486
               

               
Cow position:
               
chr3:68587189-68586855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
10, 223
               

               
Conread position:
               
166-486
               

               
Cow position:
               
chr3:68616165-68616491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 155
               

               
Conread position:
               
166-488
               

               
Cow position:
               
chr3:53428748-53429064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
65, 202
               

               
Conread position:
               
166-489
               

               
Cow position:
               
chr3:69750565-69750870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 50
               

               
Conread position:
               
166-494
               

               
Cow position:
               
chr3:8393509-8393176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
166-494
               

               
Cow position:
               
chr3:36418317-36418640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
75, 105
               

               
Conread position:
               
166-494
               

               
Cow position:
               
chr3:54506876-54506535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 233
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr3:65058869-65058521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
19, 173
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr3:68707852-68708185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 161
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr3:70896209-70895869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:6873101-6873427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:7330968-7331296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:9641725-9641382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 205
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:17936677-17937018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 222
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:23105195-23105549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 231
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:23408194-23408534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:23471293-23471647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
60, 270
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:26066157-26065822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 162
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:29887270-29887605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:48363239-48362902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 165
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:50768849-50768499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 211
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:55124115-55124461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:57274228-57273883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:60597707-60597362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
92, 156
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:73764045-73764379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 150
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:74234351-74234013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:74754485-74754145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 188
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr3:75080922-75080587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 119
               

               
Conread position:
               
166-506
               

               
Cow position:
               
chr3:54435138-54434788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
60, 174
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr3:4461320-4461679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr3:15051782-15052140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 146
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr3:15228671-15229009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr3:24353010-24352675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr3:26904269-26903925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
60, 147
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr3:27274697-27274343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 144
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr3:37186978-37186643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr3:50614793-50614449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
166-510
               

               
Cow position:
               
chr3:48253049-48252693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 211
               

               
Conread position:
               
167-446
               

               
Cow position:
               
chr3:35621450-35621176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
167-485
               

               
Cow position:
               
chr3:48072717-48073039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
167-509
               

               
Cow position:
               
chr3:77271118-77271463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 220
               

               
Conread position:
               
168-403
               

               
Cow position:
               
chr3:59299741-59299494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 208
               

               
Conread position:
               
168-495
               

               
Cow position:
               
chr3:73915661-73915979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
168-509
               

               
Cow position:
               
chr3:13329625-13329969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
69, 132
               

               
Conread position:
               
169-327
               

               
Cow position:
               
chr3:52879299-52879453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
169-347
               

               
Cow position:
               
chr3:20021435-20021238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
169-411
               

               
Cow position:
               
chr3:81881291-81881532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
63, 167
               

               
Conread position:
               
169-448
               

               
Cow position:
               
chr3:73299232-73298958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
169-463
               

               
Cow position:
               
chr3:74846558-74846854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
68, 195
               

               
Conread position:
               
169-471
               

               
Cow position:
               
chr3:79093894-79094199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
169-489
               

               
Cow position:
               
chr3:76922506-76922832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 184
               

               
Conread position:
               
169-494
               

               
Cow position:
               
chr3:70761956-70762297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 157
               

               
Conread position:
               
169-502
               

               
Cow position:
               
chr3:29813393-29813064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 136
               

               
Conread position:
               
169-505
               

               
Cow position:
               
chr3:24872859-24872531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
169-507
               

               
Cow position:
               
chr3:38864285-38863927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 240
               

               
Conread position:
               
169-507
               

               
Cow position:
               
chr3:51233937-51234286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
66, 160
               

               
Conread position:
               
169-507
               

               
Cow position:
               
chr3:56476841-56476492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
170-450
               

               
Cow position:
               
chr3:54030417-54030149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
170-461
               

               
Cow position:
               
chr3:3889411-3889708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
69, 95
               

               
Conread position:
               
170-464
               

               
Cow position:
               
chr3:75050457-75050763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
170-486
               

               
Cow position:
               
chr3:70333803-70334130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
68, 198
               

               
Conread position:
               
170-489
               

               
Cow position:
               
chr3:6182066-6182369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 151
               

               
Conread position:
               
170-500
               

               
Cow position:
               
chr3:30180249-30179902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
69, 220
               

               
Conread position:
               
170-500
               

               
Cow position:
               
chr3:43233669-43233326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
69, 212
               

               
Conread position:
               
170-502
               

               
Cow position:
               
chr3:68880965-68881295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 156
               

               
Conread position:
               
170-502
               

               
Cow position:
               
chr3:75853169-75853514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
170-506
               

               
Cow position:
               
chr3:14465549-14465891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 30
               

               
Conread position:
               
170-507
               

               
Cow position:
               
chr3:30463010-30463356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
170-509
               

               
Cow position:
               
chr3:525492-525158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
172-416
               

               
Cow position:
               
chr3:18607827-18607565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
173-311
               

               
Cow position:
               
chr3:22094451-22094594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
173-330
               

               
Cow position:
               
chr3:49789433-49789599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
173-403
               

               
Cow position:
               
chr3:54981928-54982163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
173-406
               

               
Cow position:
               
chr3:64196988-64196739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
61, 211
               

               
Conread position:
               
173-412
               

               
Cow position:
               
chr3:31349945-31350196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
68, 213
               

               
Conread position:
               
173-491
               

               
Cow position:
               
chr3:23920263-23920601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
53, 222
               

               
Conread position:
               
173-494
               

               
Cow position:
               
chr3:59000600-59000922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 152
               

               
Conread position:
               
173-500
               

               
Cow position:
               
chr3:83491243-83490902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 119
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chr3:2396632-2396962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 154
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chr3:18393239-18393571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 142
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chr3:59597336-59597002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
74, 189
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chr3:71238313-71237973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
66, 207
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chr3:74079475-74079822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 216
               

               
Conread position:
               
173-503
               

               
Cow position:
               
chr3:57577859-57577514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
173-507
               

               
Cow position:
               
chr3:61224586-61224927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 215
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr3:76138622-76138293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 108
               

               
Conread position:
               
174-384
               

               
Cow position:
               
chr3:38765533-38765735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
118, 63
               

               
Conread position:
               
174-456
               

               
Cow position:
               
chr3:67520014-67520308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
63, 212
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr3:11712103-11711773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
118, 12
               

               
Conread position:
               
175-456
               

               
Cow position:
               
chr3:61116710-61116994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
175-494
               

               
Cow position:
               
chr3:59366695-59366379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 68
               

               
Conread position:
               
175-502
               

               
Cow position:
               
chr3:64172583-64172262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
175-503
               

               
Cow position:
               
chr3:60264561-60264896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 6
               

               
Conread position:
               
175-507
               

               
Cow position:
               
chr3:8394084-8393749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
176-371
               

               
Cow position:
               
chr3:39988092-39988290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
176-380
               

               
Cow position:
               
chr3:67626197-67626407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 84
               

               
Conread position:
               
176-494
               

               
Cow position:
               
chr3:22232508-22232826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
176-502
               

               
Cow position:
               
chr3:53222172-53221831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 199
               

               
Conread position:
               
177-508
               

               
Cow position:
               
chr3:4050340-4050004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
36, 168
               

               
Conread position:
               
178-340
               

               
Cow position:
               
chr3:19788671-19788854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
178-448
               

               
Cow position:
               
chr3:14194031-14194307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 144
               

               
Conread position:
               
181-494
               

               
Cow position:
               
chr3:34271054-34270747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
56, 138
               

               
Conread position:
               
181-511
               

               
Cow position:
               
chr3:83846050-83845710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 109
               

               
Conread position:
               
187-507
               

               
Cow position:
               
chr3:55010022-55010351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
45, 157
               

               
Conread position:
               
188-374
               

               
Cow position:
               
chr3:23667750-23667562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 48
               

               
Conread position:
               
188-502
               

               
Cow position:
               
chr3:52608329-52608004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 204
               

               
Conread position:
               
189-354
               

               
Cow position:
               
chr3:82173924-82174097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
189-500
               

               
Cow position:
               
chr3:54946271-54945947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
191-363
               

               
Cow position:
               
chr3:16505339-16505522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
193-507
               

               
Cow position:
               
chr3:48296827-48296523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
199-483
               

               
Cow position:
               
chr3:45648250-45647969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 99
               

               
Conread position:
               
201-507
               

               
Cow position:
               
chr3:10347473-10347165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
217-486
               

               
Cow position:
               
chr3:56274-56541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
9, 96
               

               
Conread position:
               
217-509
               

               
Cow position:
               
chr3:17957572-17957270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 161
               

               
Conread position:
               
219-502
               

               
Cow position:
               
chr3:4032063-4031787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
220-352
               

               
Cow position:
               
chr3:53083887-53084024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
220-422
               

               
Cow position:
               
chr3:19626413-19626612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
221-501
               

               
Cow position:
               
chr3:72676189-72675910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
30, 153
               

               
Conread position:
               
221-502
               

               
Cow position:
               
chr3:53113272-53112990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
222-472
               

               
Cow position:
               
chr3:3032504-3032252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
223-461
               

               
Cow position:
               
chr3:71238566-71238332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
225-461
               

               
Cow position:
               
chr3:73820275-73820511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
225-465
               

               
Cow position:
               
chr3:62789082-62789325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
225-500
               

               
Cow position:
               
chr3:13353454-13353180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
227-363
               

               
Cow position:
               
chr3:26603460-26603602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
227-417
               

               
Cow position:
               
chr3:47753318-47753126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
24, 150
               

               
Conread position:
               
227-425
               

               
Cow position:
               
chr3:3316724-3316918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
24, 140
               

               
Conread position:
               
227-430
               

               
Cow position:
               
chr3:48459238-48459439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
65, 147
               

               
Conread position:
               
227-491
               

               
Cow position:
               
chr3:53739093-53739357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
24, 145
               

               
Conread position:
               
227-494
               

               
Cow position:
               
chr3:26921002-26920732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
227-511
               

               
Cow position:
               
chr3:17934845-17935121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
10, 135
               

               
Conread position:
               
228-502
               

               
Cow position:
               
chr3:45534202-45534479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
228-507
               

               
Cow position:
               
chr3:19404389-19404133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
228-509
               

               
Cow position:
               
chr3:55189662-55189946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 148
               

               
Conread position:
               
230-483
               

               
Cow position:
               
chr3:50069852-50069601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
230-508
               

               
Cow position:
               
chr3:59799337-59799059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 130
               

               
Conread position:
               
231-507
               

               
Cow position:
               
chr3:19006744-19006477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
21, 6
               

               
Conread position:
               
232-494
               

               
Cow position:
               
chr3:39171400-39171657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
232-502
               

               
Cow position:
               
chr3:53384193-53384467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 165
               

               
Conread position:
               
232-507
               

               
Cow position:
               
chr3:5097294-5097014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
233-403
               

               
Cow position:
               
chr3:4481028-4480858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
18, 103
               

               
Conread position:
               
233-408
               

               
Cow position:
               
chr3:2067980-2067806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
233-409
               

               
Cow position:
               
chr3:22716211-22716389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
233-427
               

               
Cow position:
               
chr3:1037108-1036918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 142
               

               
Conread position:
               
233-465
               

               
Cow position:
               
chr3:61144180-61143955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
233-487
               

               
Cow position:
               
chr3:70609712-70609459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
233-489
               

               
Cow position:
               
chr3:26874676-26874421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
233-494
               

               
Cow position:
               
chr3:62046750-62046488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
233-500
               

               
Cow position:
               
chr3:26982143-26981883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 113
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr3:23168980-23169249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr3:27696894-27697162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr3:66707981-66708255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr3:68648259-68647981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr3:71247105-71246844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
233-509
               

               
Cow position:
               
chr3:68627603-68627871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
234-371
               

               
Cow position:
               
chr3:20334092-20333952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
234-445
               

               
Cow position:
               
chr3:54290428-54290635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 142
               

               
Conread position:
               
234-477
               

               
Cow position:
               
chr3:77582189-77581951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
235-347
               

               
Cow position:
               
chr3:35239096-35238982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
235-364
               

               
Cow position:
               
chr3:38100227-38100093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
235-430
               

               
Cow position:
               
chr3:6519885-6520084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
235-430
               

               
Cow position:
               
chr3:28496917-28496717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 6
               

               
Conread position:
               
235-439
               

               
Cow position:
               
chr3:73461050-73460846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
235-463
               

               
Cow position:
               
chr3:5366852-5366628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
13, 150
               

               
Conread position:
               
235-465
               

               
Cow position:
               
chr3:59040652-59040420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 133
               

               
Conread position:
               
235-477
               

               
Cow position:
               
chr3:53508695-53508464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 132
               

               
Conread position:
               
235-484
               

               
Cow position:
               
chr3:59883985-59884237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 131
               

               
Conread position:
               
235-487
               

               
Cow position:
               
chr3:30222275-30222018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 140
               

               
Conread position:
               
235-488
               

               
Cow position:
               
chr3:48810561-48810805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 139
               

               
Conread position:
               
235-500
               

               
Cow position:
               
chr3:46901281-46901015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
235-501
               

               
Cow position:
               
chr3:49790728-49790990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 123
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr3:2506395-2506660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr3:7337700-7337953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
16, 142
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr3:17222056-17222327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 141
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr3:26960504-26960774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr3:31309270-31309538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 150
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr3:38828841-38828583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr3:53318484-53318220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr3:55970590-55970325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
58, 148
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr3:56059895-56059623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr3:83455068-83455331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chr3:44102051-44101779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 125
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chr3:55271961-55272233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
235-509
               

               
Cow position:
               
chr3:57624548-57624271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
235-510
               

               
Cow position:
               
chr3:67930103-67930375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
236-342
               

               
Cow position:
               
chr3:16601525-16601416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
236-347
               

               
Cow position:
               
chr3:24372004-24371891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
236-361
               

               
Cow position:
               
chr3:82123464-82123593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
236-362
               

               
Cow position:
               
chr3:59920110-59919986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
236-367
               

               
Cow position:
               
chr3:5305881-5305747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
236-368
               

               
Cow position:
               
chr3:64648575-64648439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
236-370
               

               
Cow position:
               
chr3:82629398-82629262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
236-371
               

               
Cow position:
               
chr3:9120925-9120790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
236-371
               

               
Cow position:
               
chr3:50593832-50593968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
236-373
               

               
Cow position:
               
chr3:68004619-68004759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
236-374
               

               
Cow position:
               
chr3:9588561-9588700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 108
               

               
Conread position:
               
236-379
               

               
Cow position:
               
chr3:59933451-59933307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
236-384
               

               
Cow position:
               
chr3:74801983-74802133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 148
               

               
Conread position:
               
236-405
               

               
Cow position:
               
chr3:3478172-3478340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
236-408
               

               
Cow position:
               
chr3:32409295-32409124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 134
               

               
Conread position:
               
236-409
               

               
Cow position:
               
chr3:19682780-19682604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 145
               

               
Conread position:
               
236-424
               

               
Cow position:
               
chr3:44330354-44330540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 125
               

               
Conread position:
               
236-428
               

               
Cow position:
               
chr3:55984181-55983986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
15, 139
               

               
Conread position:
               
236-454
               

               
Cow position:
               
chr3:7661935-7661718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
236-459
               

               
Cow position:
               
chr3:17235134-17235348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
236-460
               

               
Cow position:
               
chr3:78093306-78093524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
19, 130
               

               
Conread position:
               
236-462
               

               
Cow position:
               
chr3:1785162-1785384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
236-469
               

               
Cow position:
               
chr3:79196842-79196610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
236-477
               

               
Cow position:
               
chr3:74243075-74242838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
236-486
               

               
Cow position:
               
chr3:13507551-13507300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 125
               

               
Conread position:
               
236-491
               

               
Cow position:
               
chr3:66292093-66292350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
236-494
               

               
Cow position:
               
chr3:8061209-8060953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
236-500
               

               
Cow position:
               
chr3:116273-116016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
236-500
               

               
Cow position:
               
chr3:3738564-3738307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
236-500
               

               
Cow position:
               
chr3:78945756-78946014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
236-500
               

               
Cow position:
               
chr3:83815705-83815970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:11063448-11063199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:15506531-15506268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 146
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:15752553-15752814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:16752176-16752436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:20677759-20678018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:53150414-53150146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 141
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:57764300-57764044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
53, 77
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:59208877-59208631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:62826536-62826802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:68156806-68156558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:70565655-70565921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 118
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:78092429-78092689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:80072212-80071943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:80565049-80564780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr3:82461262-82460996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr3:17447532-17447798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr3:26681731-26681984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr3:32585233-32584968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr3:70899973-70899710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr3:73443013-73443277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr3:74601197-74600922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 141
               

               
Conread position:
               
236-509
               

               
Cow position:
               
chr3:61169882-61169609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
236-511
               

               
Cow position:
               
chr3:54781921-54782209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 132
               

               
Conread position:
               
236-511
               

               
Cow position:
               
chr3:60265171-60265430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
237-397
               

               
Cow position:
               
chr3:36672729-36672886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
237-484
               

               
Cow position:
               
chr3:26218971-26219214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
237-489
               

               
Cow position:
               
chr3:15159113-15158872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
237-494
               

               
Cow position:
               
chr3:19585945-19585688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 137
               

               
Conread position:
               
237-502
               

               
Cow position:
               
chr3:55835739-55836008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
237-502
               

               
Cow position:
               
chr3:67704628-67704361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
14, 146
               

               
Conread position:
               
237-503
               

               
Cow position:
               
chr3:72391164-72390900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 137
               

               
Conread position:
               
238-369
               

               
Cow position:
               
chr3:41652457-41652322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
238-375
               

               
Cow position:
               
chr3:69650808-69650948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
238-406
               

               
Cow position:
               
chr3:53703883-53704051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 127
               

               
Conread position:
               
238-427
               

               
Cow position:
               
chr3:9117107-9116920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
238-432
               

               
Cow position:
               
chr3:58317867-58318066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
238-461
               

               
Cow position:
               
chr3:15443648-15443870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
238-461
               

               
Cow position:
               
chr3:21014875-21015101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
238-461
               

               
Cow position:
               
chr3:79645349-79645584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 136
               

               
Conread position:
               
238-476
               

               
Cow position:
               
chr3:32183938-32184177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
238-476
               

               
Cow position:
               
chr3:59691969-59691742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
238-483
               

               
Cow position:
               
chr3:58767344-58767106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
13, 132
               

               
Conread position:
               
238-485
               

               
Cow position:
               
chr3:74134785-74134540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
13, 125
               

               
Conread position:
               
238-487
               

               
Cow position:
               
chr3:55109532-55109782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 138
               

               
Conread position:
               
238-488
               

               
Cow position:
               
chr3:2025279-2025016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
238-488
               

               
Cow position:
               
chr3:48241695-48241448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
238-494
               

               
Cow position:
               
chr3:78077271-78077019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
238-498
               

               
Cow position:
               
chr3:75045795-75046054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
238-500
               

               
Cow position:
               
chr3:59101908-59101649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:2675110-2674846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
9, 130
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:12711834-12712102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:13301770-13302031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 130
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:14601623-14601896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
13, 136
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:27940062-27940311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:42423247-42423514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 257
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:49650469-49650201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
11, 137
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:52651999-52652257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:53046582-53046840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:55085088-55085367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 138
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:63269303-63269042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 136
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:65969248-65968975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:73395197-73394937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:73709127-73708865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:74502244-74502505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:75687357-75687622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 121
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr3:83474826-83474564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
238-503
               

               
Cow position:
               
chr3:53270911-53270644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
238-506
               

               
Cow position:
               
chr3:15192661-15192379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 120
               

               
Conread position:
               
238-506
               

               
Cow position:
               
chr3:45667264-45667535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 124
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr3:18067213-18066945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr3:38691325-38691596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr3:66900652-66900932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 137
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr3:70401977-70401712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 128
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr3:77365209-77365486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr3:80581736-80581481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr3:81471015-81471291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
238-508
               

               
Cow position:
               
chr3:17895929-17895656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
238-508
               

               
Cow position:
               
chr3:80053462-80053734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
238-509
               

               
Cow position:
               
chr3:210400-210127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
238-509
               

               
Cow position:
               
chr3:14626069-14626348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
11, 141
               

               
Conread position:
               
238-509
               

               
Cow position:
               
chr3:25755101-25754840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
238-511
               

               
Cow position:
               
chr3:1830495-1830759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
239-378
               

               
Cow position:
               
chr3:21997708-21997851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
239-496
               

               
Cow position:
               
chr3:32787539-32787284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 135
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr3:6690079-6689815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 120
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr3:28898143-28898406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 136
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr3:59621569-59621821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
54, 134
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr3:65413198-65413460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
12, 133
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr3:66883864-66884124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
239-506
               

               
Cow position:
               
chr3:61840355-61840091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
239-507
               

               
Cow position:
               
chr3:75057066-75057312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
239-507
               

               
Cow position:
               
chr3:81371729-81371457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
239-509
               

               
Cow position:
               
chr3:79292908-79292638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
239-511
               

               
Cow position:
               
chr3:71231474-71231208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 119
               

               
Conread position:
               
240-416
               

               
Cow position:
               
chr3:3472119-3471941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 105
               

               
Conread position:
               
240-451
               

               
Cow position:
               
chr3:84175744-84175957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 135
               

               
Conread position:
               
240-454
               

               
Cow position:
               
chr3:70334616-70334829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
240-494
               

               
Cow position:
               
chr3:58968824-58969075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
240-502
               

               
Cow position:
               
chr3:57760577-57760315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 128
               

               
Conread position:
               
241-488
               

               
Cow position:
               
chr3:30940883-30940647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 89
               

               
Conread position:
               
241-502
               

               
Cow position:
               
chr3:2216445-2216180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
52, 134
               

               
Conread position:
               
241-509
               

               
Cow position:
               
chr3:76015369-76015103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 120
               

               
Conread position:
               
242-458
               

               
Cow position:
               
chr3:63177560-63177339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 134
               

               
Conread position:
               
242-502
               

               
Cow position:
               
chr3:15751636-15751905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 101
               

               
Conread position:
               
242-502
               

               
Cow position:
               
chr3:61278984-61278727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
243-475
               

               
Cow position:
               
chr3:24935440-24935215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 137
               

               
Conread position:
               
244-502
               

               
Cow position:
               
chr3:3638253-3638003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 52
               

               
Conread position:
               
244-506
               

               
Cow position:
               
chr3:22676035-22676274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
245-491
               

               
Cow position:
               
chr3:7940483-7940727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
6, 71
               

               
Conread position:
               
246-494
               

               
Cow position:
               
chr3:52863112-52863359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 115
               

               
Conread position:
               
246-500
               

               
Cow position:
               
chr3:71497066-71497322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 132
               

               
Conread position:
               
246-502
               

               
Cow position:
               
chr3:49460854-49461116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
248-408
               

               
Cow position:
               
chr3:70614417-70614573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
249-502
               

               
Cow position:
               
chr3:12287291-12287055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
249-502
               

               
Cow position:
               
chr3:75711375-75711128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
44, 110
               

               
Conread position:
               
249-509
               

               
Cow position:
               
chr3:23444819-23445086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 164
               

               
Conread position:
               
255-423
               

               
Cow position:
               
chr3:46108881-46108710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
255-501
               

               
Cow position:
               
chr3:78896710-78896467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
255-502
               

               
Cow position:
               
chr3:73759454-73759699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
255-509
               

               
Cow position:
               
chr3:66375384-66375124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
256-446
               

               
Cow position:
               
chr3:12670553-12670741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
181, 111
               

               
Conread position:
               
259-494
               

               
Cow position:
               
chr3:61539860-61539626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
153, 36
               

               
Conread position:
               
259-502
               

               
Cow position:
               
chr3:74878530-74878773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
260-494
               

               
Cow position:
               
chr3:81359049-81359287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
260-507
               

               
Cow position:
               
chr3:72019174-72018929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
198, 37
               

               
Conread position:
               
262-502
               

               
Cow position:
               
chr3:46350727-46350480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
262-502
               

               
Cow position:
               
chr3:66609788-66610026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
263-502
               

               
Cow position:
               
chr3:65800640-65800412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
264-494
               

               
Cow position:
               
chr3:67698330-67698105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
264-502
               

               
Cow position:
               
chr3:34937898-34937660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
264-502
               

               
Cow position:
               
chr3:81277638-81277882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 115
               

               
Conread position:
               
265-502
               

               
Cow position:
               
chr3:31046899-31047134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
266-507
               

               
Cow position:
               
chr3:76713273-76713512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
267-477
               

               
Cow position:
               
chr3:59035091-59034876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 108
               

               
Conread position:
               
267-491
               

               
Cow position:
               
chr3:39661406-39661624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
267-493
               

               
Cow position:
               
chr3:188923-188687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 130
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr3:25690844-25690615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr3:25945144-25944907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 129
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr3:31206927-31206698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr3:53592638-53592871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr3:57754425-57754654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr3:67929209-67929438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
267-500
               

               
Cow position:
               
chr3:34294217-34294464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 238
               

               
Conread position:
               
267-502
               

               
Cow position:
               
chr3:15954034-15954270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
268-494
               

               
Cow position:
               
chr3:79092342-79092569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
269-502
               

               
Cow position:
               
chr3:71430155-71430391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 108
               

               
Conread position:
               
269-507
               

               
Cow position:
               
chr3:60933466-60933225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
273-502
               

               
Cow position:
               
chr3:56301313-56301527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
273-511
               

               
Cow position:
               
chr3:56523401-56523619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
275-483
               

               
Cow position:
               
chr3:22820614-22820405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
275-506
               

               
Cow position:
               
chr3:19708065-19708292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
279-490
               

               
Cow position:
               
chr3:53094892-53095106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
291-487
               

               
Cow position:
               
chr3:77665745-77665943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
291-500
               

               
Cow position:
               
chr3:33698756-33698544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
116, 80
               

               
Conread position:
               
291-509
               

               
Cow position:
               
chr3:39328425-39328204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
117, 82
               

               
Conread position:
               
292-502
               

               
Cow position:
               
chr3:83201500-83201707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
295-461
               

               
Cow position:
               
chr3:74500264-74500097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
295-502
               

               
Cow position:
               
chr3:21340940-21341145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
295-502
               

               
Cow position:
               
chr3:29807484-29807283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
298-488
               

               
Cow position:
               
chr3:15992736-15992546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 74
               

               
Conread position:
               
298-502
               

               
Cow position:
               
chr3:5850911-5851107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
195, 75
               

               
Conread position:
               
298-502
               

               
Cow position:
               
chr3:55106421-55106622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 73
               

               
Conread position:
               
299-502
               

               
Cow position:
               
chr3:70632038-70631835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
302-507
               

               
Cow position:
               
chr3:74409500-74409296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
306-472
               

               
Cow position:
               
chr3:9638363-9638521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
306-502
               

               
Cow position:
               
chr3:31501358-31501168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 35
               

               
Conread position:
               
313-494
               

               
Cow position:
               
chr3:84000616-84000438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 51
               

               
Conread position:
               
319-488
               

               
Cow position:
               
chr3:53192429-53192590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
319-502
               

               
Cow position:
               
chr3:9843584-9843404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
76, 46
               

               
Conread position:
               
319-502
               

               
Cow position:
               
chr3:28692432-28692617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
85, 53
               

               
Conread position:
               
319-509
               

               
Cow position:
               
chr3:59515101-59514915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
320-502
               

               
Cow position:
               
chr3:17450943-17451113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
173, 44
               

               
Conread position:
               
320-507
               

               
Cow position:
               
chr3:57553852-57554038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
327-461
               

               
Cow position:
               
chr3:19789125-19789254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 35
               

               
Conread position:
               
327-502
               

               
Cow position:
               
chr3:73590005-73590182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
329-500
               

               
Cow position:
               
chr3:77496816-77496640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
334-502
               

               
Cow position:
               
chr3:27212346-27212179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
344-507
               

               
Cow position:
               
chr3:61190952-61191112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
350-507
               

               
Cow position:
               
chr3:22924444-22924598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
146, 23
               

               
Conread position:
               
387-502
               

               
Cow position:
               
chr3:26894596-26894478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               
Show alignments to all cow chromosomes.