Non-Coding RNA Search

Cow genome map


           Conread name:
           Pla1-C0000039_N19
        

               Conread position:
               124-502
               

               Cow position:
               chr5:30487491-30487104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               144-485
               

               Cow position:
               chr5:55956151-55955793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               261
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               96, 11
               

               Conread position:
               148-506
               

               Cow position:
               chr5:40109722-40109358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 7
               

               Conread position:
               148-509
               

               Cow position:
               chr5:11539814-11540191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               86, 23
               

               Conread position:
               150-502
               

               Cow position:
               chr5:2309321-2309694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               85, 234
               

               Conread position:
               153-368
               

               Cow position:
               chr5:34914820-34915055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               153-406
               

               Cow position:
               chr5:40237422-40237178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               98, 40
               

               Conread position:
               153-483
               

               Cow position:
               chr5:49474320-49474659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 232
               

               Conread position:
               154-509
               

               Cow position:
               chr5:44446642-44447010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 231
               

               Conread position:
               155-418
               

               Cow position:
               chr5:67118634-67118369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               40, 5
               

               Conread position:
               155-449
               

               Cow position:
               chr5:41604836-41604544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 72
               

               Conread position:
               155-502
               

               Cow position:
               chr5:69338046-69337697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 217
               

               Conread position:
               156-502
               

               Cow position:
               chr5:47870824-47871181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               76, 17
               

               Conread position:
               157-459
               

               Cow position:
               chr5:30805388-30805077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               157-461
               

               Cow position:
               chr5:50576001-50575693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               20, 124
               

               Conread position:
               160-465
               

               Cow position:
               chr5:30233136-30232803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               66, 11
               

               Conread position:
               160-465
               

               Cow position:
               chr5:59872877-59873186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               160-507
               

               Cow position:
               chr5:74643457-74643810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 164
               

               Conread position:
               161-374
               

               Cow position:
               chr5:69383477-69383247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               161-406
               

               Cow position:
               chr5:50101153-50101413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 10
               

               Conread position:
               161-488
               

               Cow position:
               chr5:72006656-72006973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               76, 23
               

               Conread position:
               161-502
               

               Cow position:
               chr5:3626955-3627287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 106
               

               Conread position:
               161-502
               

               Cow position:
               chr5:30276913-30276563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 215
               

               Conread position:
               161-506
               

               Cow position:
               chr5:458686-458344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               245
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               161-507
               

               Cow position:
               chr5:4280671-4280322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               6, 227
               

               Conread position:
               161-507
               

               Cow position:
               chr5:35459071-35459430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               71, 10
               

               Conread position:
               161-507
               

               Cow position:
               chr5:41165307-41164952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 10
               

               Conread position:
               163-261
               

               Cow position:
               chr5:64061237-64061139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               163-340
               

               Cow position:
               chr5:34288031-34288224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               71, 10
               

               Conread position:
               163-342
               

               Cow position:
               chr5:26147812-26147615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 11
               

               Conread position:
               163-377
               

               Cow position:
               chr5:46540836-46541066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               76, 158
               

               Conread position:
               163-448
               

               Cow position:
               chr5:19752525-19752226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 159
               

               Conread position:
               163-461
               

               Cow position:
               chr5:35976718-35976429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 133
               

               Conread position:
               163-477
               

               Cow position:
               chr5:42670649-42670964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               56, 211
               

               Conread position:
               163-487
               

               Cow position:
               chr5:29844485-29844161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               88, 65
               

               Conread position:
               163-488
               

               Cow position:
               chr5:27102589-27102913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               88, 65
               

               Conread position:
               163-489
               

               Cow position:
               chr5:56877694-56877368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               73, 154
               

               Conread position:
               163-494
               

               Cow position:
               chr5:28927399-28927714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               245, 66
               

               Conread position:
               163-500
               

               Cow position:
               chr5:42050768-42050419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 202
               

               Conread position:
               163-500
               

               Cow position:
               chr5:57934896-57935241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 219
               

               Conread position:
               163-501
               

               Cow position:
               chr5:23529079-23529406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               129, 10
               

               Conread position:
               163-501
               

               Cow position:
               chr5:28224666-28224319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               76, 205
               

               Conread position:
               163-502
               

               Cow position:
               chr5:9893901-9894261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               163-502
               

               Cow position:
               chr5:16025259-16025591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 149
               

               Conread position:
               163-502
               

               Cow position:
               chr5:26262461-26262806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               71, 164
               

               Conread position:
               163-502
               

               Cow position:
               chr5:34562233-34561878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 221
               

               Conread position:
               163-502
               

               Cow position:
               chr5:56524386-56524041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 228
               

               Conread position:
               163-502
               

               Cow position:
               chr5:65941026-65941384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 239
               

               Conread position:
               163-504
               

               Cow position:
               chr5:8023991-8024331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               252
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               72, 36
               

               Conread position:
               163-506
               

               Cow position:
               chr5:16937811-16938149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               77, 9
               

               Conread position:
               163-506
               

               Cow position:
               chr5:43858194-43858572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               66, 328
               

               Conread position:
               163-509
               

               Cow position:
               chr5:3242271-3242621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 157
               

               Conread position:
               164-502
               

               Cow position:
               chr5:21617677-21617324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 9
               

               Conread position:
               165-412
               

               Cow position:
               chr5:71724508-71724259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               165-414
               

               Cow position:
               chr5:56153821-56153569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               40, 45
               

               Conread position:
               165-487
               

               Cow position:
               chr5:16893556-16893890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 212
               

               Conread position:
               165-494
               

               Cow position:
               chr5:29903321-29903647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 54
               

               Conread position:
               165-500
               

               Cow position:
               chr5:30845328-30844981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               63, 156
               

               Conread position:
               166-304
               

               Cow position:
               chr5:37672400-37672262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               85, 29
               

               Conread position:
               166-307
               

               Cow position:
               chr5:69357072-69356924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               166-313
               

               Cow position:
               chr5:70572579-70572424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               166-316
               

               Cow position:
               chr5:1085960-1085812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               166-328
               

               Cow position:
               chr5:35394218-35394395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               166-335
               

               Cow position:
               chr5:15991424-15991608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               166-342
               

               Cow position:
               chr5:35190327-35190134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               166-342
               

               Cow position:
               chr5:51289380-51289567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               56, 152
               

               Conread position:
               166-356
               

               Cow position:
               chr5:4267881-4267680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               64, 52
               

               Conread position:
               166-356
               

               Cow position:
               chr5:75227992-75228189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               166-367
               

               Cow position:
               chr5:41403377-41403573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               84, 22
               

               Conread position:
               166-368
               

               Cow position:
               chr5:40241955-40241744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 116
               

               Conread position:
               166-371
               

               Cow position:
               chr5:51298494-51298718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               70, 154
               

               Conread position:
               166-380
               

               Cow position:
               chr5:60523948-60523720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               60, 154
               

               Conread position:
               166-383
               

               Cow position:
               chr5:17105066-17104835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               67, 156
               

               Conread position:
               166-403
               

               Cow position:
               chr5:26548922-26549174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               75, 217
               

               Conread position:
               166-406
               

               Cow position:
               chr5:22795427-22795178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               55, 28
               

               Conread position:
               166-418
               

               Cow position:
               chr5:63192533-63192789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               98, 214
               

               Conread position:
               166-430
               

               Cow position:
               chr5:34625169-34624896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               80, 214
               

               Conread position:
               166-449
               

               Cow position:
               chr5:24175572-24175291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               133, 59
               

               Conread position:
               166-459
               

               Cow position:
               chr5:34922742-34923040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               166-462
               

               Cow position:
               chr5:22242553-22242867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 50
               

               Conread position:
               166-473
               

               Cow position:
               chr5:36038784-36039108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 43
               

               Conread position:
               166-477
               

               Cow position:
               chr5:17028297-17027989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               87, 61
               

               Conread position:
               166-486
               

               Cow position:
               chr5:22667291-22666976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               65, 191
               

               Conread position:
               166-489
               

               Cow position:
               chr5:44726131-44726446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               166-494
               

               Cow position:
               chr5:12322590-12322926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 144
               

               Conread position:
               166-494
               

               Cow position:
               chr5:18289339-18289004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               70, 142
               

               Conread position:
               166-494
               

               Cow position:
               chr5:61726178-61725848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               50, 100
               

               Conread position:
               166-499
               

               Cow position:
               chr5:33560517-33560865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               73, 223
               

               Conread position:
               166-500
               

               Cow position:
               chr5:51053427-51053780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               69, 175
               

               Conread position:
               166-500
               

               Cow position:
               chr5:56028324-56028658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 176
               

               Conread position:
               166-500
               

               Cow position:
               chr5:64175909-64176249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               254
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               73, 208
               

               Conread position:
               166-502
               

               Cow position:
               chr5:3582776-3582441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               74, 207
               

               Conread position:
               166-502
               

               Cow position:
               chr5:25899674-25900004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               93, 51
               

               Conread position:
               166-502
               

               Cow position:
               chr5:29756538-29756207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               85, 62
               

               Conread position:
               166-502
               

               Cow position:
               chr5:30253961-30253607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 219
               

               Conread position:
               166-502
               

               Cow position:
               chr5:40039568-40039901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               69, 50
               

               Conread position:
               166-502
               

               Cow position:
               chr5:41009789-41010127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 164
               

               Conread position:
               166-502
               

               Cow position:
               chr5:43922950-43923280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 50
               

               Conread position:
               166-502
               

               Cow position:
               chr5:45472495-45472135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               166-502
               

               Cow position:
               chr5:45845469-45845826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 229
               

               Conread position:
               166-502
               

               Cow position:
               chr5:47602029-47601685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               75, 50
               

               Conread position:
               166-502
               

               Cow position:
               chr5:57101576-57101910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               166-502
               

               Cow position:
               chr5:72952045-72951705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 66
               

               Conread position:
               166-505
               

               Cow position:
               chr5:35763465-35763139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               166-506
               

               Cow position:
               chr5:38833335-38832985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               166-507
               

               Cow position:
               chr5:18899177-18898846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               71, 14
               

               Conread position:
               166-507
               

               Cow position:
               chr5:30303102-30302754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 151
               

               Conread position:
               166-507
               

               Cow position:
               chr5:40387680-40388012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               84, 62
               

               Conread position:
               166-507
               

               Cow position:
               chr5:44847806-44848164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               258
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               65, 224
               

               Conread position:
               166-509
               

               Cow position:
               chr5:11667963-11668326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 222
               

               Conread position:
               166-509
               

               Cow position:
               chr5:56467891-56467557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               117, 37
               

               Conread position:
               166-509
               

               Cow position:
               chr5:62172619-62172271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               166-511
               

               Cow position:
               chr5:56014943-56014589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 227
               

               Conread position:
               167-422
               

               Cow position:
               chr5:24136913-24136660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               84, 12
               

               Conread position:
               168-507
               

               Cow position:
               chr5:55232604-55232934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               70, 21
               

               Conread position:
               169-314
               

               Cow position:
               chr5:37253641-37253481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               169-373
               

               Cow position:
               chr5:50824801-50824586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               67, 206
               

               Conread position:
               169-477
               

               Cow position:
               chr5:12434753-12434427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               61, 221
               

               Conread position:
               169-502
               

               Cow position:
               chr5:15364088-15363760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 205
               

               Conread position:
               169-502
               

               Cow position:
               chr5:28302538-28302874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               65, 25
               

               Conread position:
               169-502
               

               Cow position:
               chr5:47696242-47696573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               70, 140
               

               Conread position:
               169-502
               

               Cow position:
               chr5:50600264-50599923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 206
               

               Conread position:
               169-502
               

               Cow position:
               chr5:65136475-65136150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               72, 17
               

               Conread position:
               169-507
               

               Cow position:
               chr5:7723862-7723529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               82, 42
               

               Conread position:
               169-507
               

               Cow position:
               chr5:66339291-66338941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 148
               

               Conread position:
               169-509
               

               Cow position:
               chr5:3549587-3549925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               245
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               70, 118
               

               Conread position:
               169-511
               

               Cow position:
               chr5:55177098-55176745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               71, 40
               

               Conread position:
               170-484
               

               Cow position:
               chr5:12902136-12901800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               61, 192
               

               Conread position:
               170-494
               

               Cow position:
               chr5:34050325-34049986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 214
               

               Conread position:
               170-504
               

               Cow position:
               chr5:48009664-48009985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 43
               

               Conread position:
               170-506
               

               Cow position:
               chr5:39875322-39874985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               80, 55
               

               Conread position:
               171-502
               

               Cow position:
               chr5:63963976-63964303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               122, 74
               

               Conread position:
               172-502
               

               Cow position:
               chr5:45397780-45397444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 23
               

               Conread position:
               173-462
               

               Cow position:
               chr5:17554821-17555121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 105
               

               Conread position:
               173-465
               

               Cow position:
               chr5:57526713-57527013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 187
               

               Conread position:
               173-486
               

               Cow position:
               chr5:37941593-37941907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 120
               

               Conread position:
               173-495
               

               Cow position:
               chr5:74003438-74003755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               30, 141
               

               Conread position:
               173-502
               

               Cow position:
               chr5:14314730-14314391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 217
               

               Conread position:
               173-502
               

               Cow position:
               chr5:22643033-22643352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               173-502
               

               Cow position:
               chr5:29097576-29097225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               55, 214
               

               Conread position:
               173-502
               

               Cow position:
               chr5:39695846-39695519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               77, 54
               

               Conread position:
               173-502
               

               Cow position:
               chr5:50942946-50943284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               260
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               10, 196
               

               Conread position:
               173-502
               

               Cow position:
               chr5:70951679-70952010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 129
               

               Conread position:
               174-313
               

               Cow position:
               chr5:7558579-7558715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               174-347
               

               Cow position:
               chr5:26252983-26253154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               77, 25
               

               Conread position:
               174-488
               

               Cow position:
               chr5:16179310-16179644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               69, 280
               

               Conread position:
               174-494
               

               Cow position:
               chr5:6286239-6286549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 22
               

               Conread position:
               174-501
               

               Cow position:
               chr5:62639098-62638774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               82, 54
               

               Conread position:
               175-369
               

               Cow position:
               chr5:51065727-51065527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               62, 160
               

               Conread position:
               175-406
               

               Cow position:
               chr5:72006285-72006528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               175-477
               

               Cow position:
               chr5:29352920-29353236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               51, 95
               

               Conread position:
               175-494
               

               Cow position:
               chr5:56680444-56680122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               75, 43
               

               Conread position:
               175-500
               

               Cow position:
               chr5:20779187-20779518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               51, 162
               

               Conread position:
               175-502
               

               Cow position:
               chr5:12673268-12673594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               63, 150
               

               Conread position:
               175-502
               

               Cow position:
               chr5:37646287-37645943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 217
               

               Conread position:
               175-502
               

               Cow position:
               chr5:41452479-41452797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               73, 58
               

               Conread position:
               175-502
               

               Cow position:
               chr5:75436700-75437027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 45
               

               Conread position:
               176-456
               

               Cow position:
               chr5:3772053-3771761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               54, 158
               

               Conread position:
               176-477
               

               Cow position:
               chr5:60016375-60016059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 150
               

               Conread position:
               177-363
               

               Cow position:
               chr5:54425658-54425472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               177-366
               

               Cow position:
               chr5:21223519-21223324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               35, 9
               

               Conread position:
               177-477
               

               Cow position:
               chr5:60184008-60183693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 9
               

               Conread position:
               177-484
               

               Cow position:
               chr5:15721878-15722181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               177-502
               

               Cow position:
               chr5:26377470-26377801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               64, 172
               

               Conread position:
               178-496
               

               Cow position:
               chr5:35826807-35826476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 219
               

               Conread position:
               178-500
               

               Cow position:
               chr5:24349299-24348975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               63, 15
               

               Conread position:
               178-506
               

               Cow position:
               chr5:62869854-62870173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               118, 17
               

               Conread position:
               180-488
               

               Cow position:
               chr5:41713495-41713183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               45, 151
               

               Conread position:
               180-502
               

               Cow position:
               chr5:45225613-45225959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               58, 126
               

               Conread position:
               182-379
               

               Cow position:
               chr5:56334314-56334521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               183-493
               

               Cow position:
               chr5:66366713-66366394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 212
               

               Conread position:
               187-502
               

               Cow position:
               chr5:4709971-4710279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               5, 23
               

               Conread position:
               188-448
               

               Cow position:
               chr5:69636408-69636156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               49, 31
               

               Conread position:
               188-509
               

               Cow position:
               chr5:54350172-54350508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               49, 187
               

               Conread position:
               189-509
               

               Cow position:
               chr5:36855393-36855065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               39, 172
               

               Conread position:
               191-502
               

               Cow position:
               chr5:11427037-11427372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               45, 204
               

               Conread position:
               199-488
               

               Cow position:
               chr5:26990568-26990273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 80
               

               Conread position:
               199-507
               

               Cow position:
               chr5:72564937-72564620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 187
               

               Conread position:
               199-509
               

               Cow position:
               chr5:69731676-69731370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               25, 116
               

               Conread position:
               210-367
               

               Cow position:
               chr5:45126811-45126649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               214-502
               

               Cow position:
               chr5:20783778-20783490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               23, 110
               

               Conread position:
               220-494
               

               Cow position:
               chr5:57575922-57575644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               220-502
               

               Cow position:
               chr5:991625-991332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               17, 171
               

               Conread position:
               220-504
               

               Cow position:
               chr5:55756268-55756566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               28, 6
               

               Conread position:
               221-502
               

               Cow position:
               chr5:15598089-15598364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 59
               

               Conread position:
               221-502
               

               Cow position:
               chr5:52000368-52000088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               13, 96
               

               Conread position:
               221-503
               

               Cow position:
               chr5:63992024-63992298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               30, 155
               

               Conread position:
               222-488
               

               Cow position:
               chr5:6045444-6045172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 6
               

               Conread position:
               223-502
               

               Cow position:
               chr5:45804206-45803929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 45
               

               Conread position:
               224-425
               

               Cow position:
               chr5:55795819-55796017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               13, 151
               

               Conread position:
               225-408
               

               Cow position:
               chr5:69099864-69099681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               26, 150
               

               Conread position:
               225-507
               

               Cow position:
               chr5:59325698-59325979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               23, 94
               

               Conread position:
               225-509
               

               Cow position:
               chr5:39258649-39258386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 79
               

               Conread position:
               226-414
               

               Cow position:
               chr5:56517250-56517057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               11, 81
               

               Conread position:
               226-494
               

               Cow position:
               chr5:63865947-63865670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 95
               

               Conread position:
               227-393
               

               Cow position:
               chr5:45186978-45187142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               23, 39
               

               Conread position:
               227-408
               

               Cow position:
               chr5:56212046-56211864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               65, 88
               

               Conread position:
               227-449
               

               Cow position:
               chr5:31640567-31640340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               26, 140
               

               Conread position:
               227-502
               

               Cow position:
               chr5:4221121-4220850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 111
               

               Conread position:
               227-502
               

               Cow position:
               chr5:7044563-7044841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 154
               

               Conread position:
               227-502
               

               Cow position:
               chr5:12710020-12709751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 50
               

               Conread position:
               227-502
               

               Cow position:
               chr5:46509724-46509997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 147
               

               Conread position:
               227-502
               

               Cow position:
               chr5:50821925-50821648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 131
               

               Conread position:
               227-502
               

               Cow position:
               chr5:67244060-67243795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               25, 89
               

               Conread position:
               227-506
               

               Cow position:
               chr5:64758625-64758907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               24, 148
               

               Conread position:
               227-507
               

               Cow position:
               chr5:58856246-58855962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               10, 144
               

               Conread position:
               227-509
               

               Cow position:
               chr5:60715226-60715502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 103
               

               Conread position:
               227-511
               

               Cow position:
               chr5:29828188-29827904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               24, 34
               

               Conread position:
               227-511
               

               Cow position:
               chr5:44752165-44752456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               23, 158
               

               Conread position:
               228-428
               

               Cow position:
               chr5:63627394-63627584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 66
               

               Conread position:
               228-464
               

               Cow position:
               chr5:51935330-51935096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 147
               

               Conread position:
               228-502
               

               Cow position:
               chr5:67932331-67932595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               22, 109
               

               Conread position:
               229-494
               

               Cow position:
               chr5:57626928-57626681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 90
               

               Conread position:
               229-502
               

               Cow position:
               chr5:64321889-64321619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               231-435
               

               Cow position:
               chr5:1461227-1461021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 143
               

               Conread position:
               231-489
               

               Cow position:
               chr5:19813081-19813335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 155
               

               Conread position:
               232-369
               

               Cow position:
               chr5:60599069-60599209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               232-412
               

               Cow position:
               chr5:61102853-61102673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               232-501
               

               Cow position:
               chr5:40356709-40356999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               232-502
               

               Cow position:
               chr5:46425718-46425985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               25, 144
               

               Conread position:
               233-469
               

               Cow position:
               chr5:35126191-35125953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 141
               

               Conread position:
               233-494
               

               Cow position:
               chr5:29771664-29771393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 204
               

               Conread position:
               233-502
               

               Cow position:
               chr5:7755435-7755696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               60, 30
               

               Conread position:
               233-502
               

               Cow position:
               chr5:15426674-15426395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 107
               

               Conread position:
               233-502
               

               Cow position:
               chr5:24996087-24996357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 135
               

               Conread position:
               233-502
               

               Cow position:
               chr5:54060412-54060143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               18, 83
               

               Conread position:
               233-507
               

               Cow position:
               chr5:65752995-65752715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 142
               

               Conread position:
               233-509
               

               Cow position:
               chr5:45574756-45574478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               19, 145
               

               Conread position:
               234-336
               

               Cow position:
               chr5:35833544-35833439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               235-353
               

               Cow position:
               chr5:2240857-2240976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 83
               

               Conread position:
               235-355
               

               Cow position:
               chr5:38169029-38168905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               235-380
               

               Cow position:
               chr5:9233854-9234001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 141
               

               Conread position:
               235-408
               

               Cow position:
               chr5:49341915-49342086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               16, 141
               

               Conread position:
               235-446
               

               Cow position:
               chr5:57755901-57756108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               235-477
               

               Cow position:
               chr5:20422059-20422292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               16, 71
               

               Conread position:
               235-477
               

               Cow position:
               chr5:23678569-23678812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               16, 31
               

               Conread position:
               235-477
               

               Cow position:
               chr5:58446941-58446695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               16, 144
               

               Conread position:
               235-483
               

               Cow position:
               chr5:21039849-21040090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               16, 53
               

               Conread position:
               235-492
               

               Cow position:
               chr5:53710555-53710816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               14, 139
               

               Conread position:
               235-493
               

               Cow position:
               chr5:57419660-57419917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 139
               

               Conread position:
               235-500
               

               Cow position:
               chr5:37377987-37377739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 59
               

               Conread position:
               235-500
               

               Cow position:
               chr5:46512635-46512895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 139
               

               Conread position:
               235-501
               

               Cow position:
               chr5:14550450-14550715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 143
               

               Conread position:
               235-502
               

               Cow position:
               chr5:4166774-4166528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               235-502
               

               Cow position:
               chr5:34463446-34463719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               235-502
               

               Cow position:
               chr5:35246976-35247244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               14, 119
               

               Conread position:
               235-507
               

               Cow position:
               chr5:57074197-57074476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 144
               

               Conread position:
               235-509
               

               Cow position:
               chr5:72895820-72895545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               16, 125
               

               Conread position:
               236-339
               

               Cow position:
               chr5:38647773-38647667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               236-347
               

               Cow position:
               chr5:54312734-54312620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               236-355
               

               Cow position:
               chr5:35647476-35647354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               236-357
               

               Cow position:
               chr5:55942246-55942370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               236-379
               

               Cow position:
               chr5:60189126-60188977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               236-403
               

               Cow position:
               chr5:8736147-8736322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               236-406
               

               Cow position:
               chr5:57686604-57686776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               15, 143
               

               Conread position:
               236-408
               

               Cow position:
               chr5:17602072-17602238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 82
               

               Conread position:
               236-423
               

               Cow position:
               chr5:35982604-35982793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 144
               

               Conread position:
               236-425
               

               Cow position:
               chr5:56338888-56339074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               236-426
               

               Cow position:
               chr5:40242176-40241985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               236-432
               

               Cow position:
               chr5:59626839-59627037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               236-432
               

               Cow position:
               chr5:63150036-63150230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 86
               

               Conread position:
               236-447
               

               Cow position:
               chr5:29912553-29912341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               236-461
               

               Cow position:
               chr5:54086671-54086451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 70
               

               Conread position:
               236-461
               

               Cow position:
               chr5:66551763-66551994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               15, 141
               

               Conread position:
               236-462
               

               Cow position:
               chr5:62378913-62378698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               15, 58
               

               Conread position:
               236-472
               

               Cow position:
               chr5:12557154-12557395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 149
               

               Conread position:
               236-472
               

               Cow position:
               chr5:54375369-54375610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 115
               

               Conread position:
               236-477
               

               Cow position:
               chr5:7698133-7697897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               15, 44
               

               Conread position:
               236-482
               

               Cow position:
               chr5:13717438-13717684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 6
               

               Conread position:
               236-487
               

               Cow position:
               chr5:16206022-16206273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               236-489
               

               Cow position:
               chr5:17086888-17087145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               15, 133
               

               Conread position:
               236-489
               

               Cow position:
               chr5:21829000-21828746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               236-489
               

               Cow position:
               chr5:37814759-37814504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 216
               

               Conread position:
               236-489
               

               Cow position:
               chr5:74016073-74015820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               236-490
               

               Cow position:
               chr5:64591962-64592213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               14, 152
               

               Conread position:
               236-494
               

               Cow position:
               chr5:64026886-64027133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 141
               

               Conread position:
               236-498
               

               Cow position:
               chr5:14920797-14921057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 122
               

               Conread position:
               236-501
               

               Cow position:
               chr5:30629024-30629291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 146
               

               Conread position:
               236-501
               

               Cow position:
               chr5:30949782-30950049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 140
               

               Conread position:
               236-502
               

               Cow position:
               chr5:7193549-7193297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               57, 12
               

               Conread position:
               236-502
               

               Cow position:
               chr5:11229540-11229803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 87
               

               Conread position:
               236-502
               

               Cow position:
               chr5:19278574-19278834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               58, 111
               

               Conread position:
               236-502
               

               Cow position:
               chr5:25035125-25035376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               17, 71
               

               Conread position:
               236-502
               

               Cow position:
               chr5:25230886-25231138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               236-502
               

               Cow position:
               chr5:26467761-26467489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               16, 142
               

               Conread position:
               236-502
               

               Cow position:
               chr5:35685068-35684804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               236-502
               

               Cow position:
               chr5:37646411-37646680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               236-502
               

               Cow position:
               chr5:39447399-39447665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               16, 143
               

               Conread position:
               236-502
               

               Cow position:
               chr5:41545760-41546023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               236-502
               

               Cow position:
               chr5:44993916-44994172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               16, 80
               

               Conread position:
               236-502
               

               Cow position:
               chr5:52165046-52165313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               236-502
               

               Cow position:
               chr5:53835849-53835580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 139
               

               Conread position:
               236-502
               

               Cow position:
               chr5:55068839-55068576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               15, 124
               

               Conread position:
               236-502
               

               Cow position:
               chr5:56070992-56070722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 139
               

               Conread position:
               236-502
               

               Cow position:
               chr5:56317422-56317164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 58
               

               Conread position:
               236-502
               

               Cow position:
               chr5:65967598-65967862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 140
               

               Conread position:
               236-502
               

               Cow position:
               chr5:68719000-68718743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               17, 58
               

               Conread position:
               236-502
               

               Cow position:
               chr5:69461468-69461200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               236-505
               

               Cow position:
               chr5:23168693-23168960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 141
               

               Conread position:
               236-506
               

               Cow position:
               chr5:66257769-66257501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               236-507
               

               Cow position:
               chr5:43929603-43929875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 93
               

               Conread position:
               237-342
               

               Cow position:
               chr5:37842147-37842255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               237-396
               

               Cow position:
               chr5:61875669-61875517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 83
               

               Conread position:
               237-451
               

               Cow position:
               chr5:70270999-70270783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 178
               

               Conread position:
               237-484
               

               Cow position:
               chr5:27171861-27172095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               14, 82
               

               Conread position:
               237-491
               

               Cow position:
               chr5:32338834-32339086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 117
               

               Conread position:
               237-502
               

               Cow position:
               chr5:5110937-5111207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 142
               

               Conread position:
               237-502
               

               Cow position:
               chr5:14629673-14629947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 143
               

               Conread position:
               237-507
               

               Cow position:
               chr5:34301048-34300777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               237-511
               

               Cow position:
               chr5:43457399-43457659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 80
               

               Conread position:
               238-368
               

               Cow position:
               chr5:39035909-39035778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               238-396
               

               Cow position:
               chr5:57230207-57230365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 137
               

               Conread position:
               238-407
               

               Cow position:
               chr5:57101393-57101562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 76
               

               Conread position:
               238-414
               

               Cow position:
               chr5:49501693-49501870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 130
               

               Conread position:
               238-451
               

               Cow position:
               chr5:32394730-32394519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               238-461
               

               Cow position:
               chr5:43992455-43992230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               18, 137
               

               Conread position:
               238-461
               

               Cow position:
               chr5:49685146-49685362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               57, 8
               

               Conread position:
               238-461
               

               Cow position:
               chr5:55019423-55019204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               13, 116
               

               Conread position:
               238-461
               

               Cow position:
               chr5:63234698-63234921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 83
               

               Conread position:
               238-488
               

               Cow position:
               chr5:26476887-26477131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               13, 102
               

               Conread position:
               238-488
               

               Cow position:
               chr5:44796602-44796849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               13, 131
               

               Conread position:
               238-500
               

               Cow position:
               chr5:44028176-44028433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               238-500
               

               Cow position:
               chr5:45273371-45273633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               55, 145
               

               Conread position:
               238-500
               

               Cow position:
               chr5:54767778-54768042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               12, 109
               

               Conread position:
               238-501
               

               Cow position:
               chr5:55966752-55967012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               238-502
               

               Cow position:
               chr5:3204957-3204699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               238-502
               

               Cow position:
               chr5:4218988-4218741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               238-502
               

               Cow position:
               chr5:5257157-5257426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 170
               

               Conread position:
               238-502
               

               Cow position:
               chr5:8820882-8821142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               238-502
               

               Cow position:
               chr5:9089897-9090154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               238-502
               

               Cow position:
               chr5:14473272-14473547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               11, 262
               

               Conread position:
               238-502
               

               Cow position:
               chr5:20128183-20127923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               11, 136
               

               Conread position:
               238-502
               

               Cow position:
               chr5:62142807-62142536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               13, 137
               

               Conread position:
               238-502
               

               Cow position:
               chr5:66972560-66972293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               11, 127
               

               Conread position:
               238-502
               

               Cow position:
               chr5:74580920-74580662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 120
               

               Conread position:
               238-507
               

               Cow position:
               chr5:35969663-35969401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               13, 94
               

               Conread position:
               238-508
               

               Cow position:
               chr5:63987315-63987593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 129
               

               Conread position:
               238-510
               

               Cow position:
               chr5:37808532-37808818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 264
               

               Conread position:
               239-401
               

               Cow position:
               chr5:45574235-45574398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 128
               

               Conread position:
               239-422
               

               Cow position:
               chr5:20288133-20288314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               12, 128
               

               Conread position:
               239-427
               

               Cow position:
               chr5:61455974-61455787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               239-454
               

               Cow position:
               chr5:43403033-43402815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               239-459
               

               Cow position:
               chr5:47323591-47323375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               54, 95
               

               Conread position:
               239-461
               

               Cow position:
               chr5:15479255-15479034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               239-490
               

               Cow position:
               chr5:64140668-64140409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 75
               

               Conread position:
               239-494
               

               Cow position:
               chr5:65776254-65776507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               12, 123
               

               Conread position:
               239-500
               

               Cow position:
               chr5:53855836-53855563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               9, 142
               

               Conread position:
               239-502
               

               Cow position:
               chr5:71494951-71494683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 129
               

               Conread position:
               239-507
               

               Cow position:
               chr5:17999366-17999636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               10, 57
               

               Conread position:
               239-509
               

               Cow position:
               chr5:57737229-57736967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 128
               

               Conread position:
               240-502
               

               Cow position:
               chr5:4031857-4032125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               240-509
               

               Cow position:
               chr5:50533259-50533530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               242-374
               

               Cow position:
               chr5:24069517-24069382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               9, 91
               

               Conread position:
               242-378
               

               Cow position:
               chr5:9170456-9170593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 133
               

               Conread position:
               242-412
               

               Cow position:
               chr5:33538001-33537827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               9, 128
               

               Conread position:
               242-436
               

               Cow position:
               chr5:26150294-26150488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               9, 67
               

               Conread position:
               242-439
               

               Cow position:
               chr5:67212487-67212286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               51, 133
               

               Conread position:
               242-475
               

               Cow position:
               chr5:41294207-41293974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               12, 88
               

               Conread position:
               242-487
               

               Cow position:
               chr5:64139687-64139448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               10, 137
               

               Conread position:
               242-502
               

               Cow position:
               chr5:17062955-17063225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               52, 105
               

               Conread position:
               242-503
               

               Cow position:
               chr5:54311462-54311197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               47, 131
               

               Conread position:
               242-509
               

               Cow position:
               chr5:42744907-42744645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               246-471
               

               Cow position:
               chr5:64523741-64523969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               47, 154
               

               Conread position:
               246-487
               

               Cow position:
               chr5:65883651-65883894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               246-494
               

               Cow position:
               chr5:19335659-19335912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 129
               

               Conread position:
               247-502
               

               Cow position:
               chr5:61840311-61840052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 116
               

               Conread position:
               247-509
               

               Cow position:
               chr5:52644959-52645223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 125
               

               Conread position:
               248-362
               

               Cow position:
               chr5:17605014-17605130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               248-509
               

               Cow position:
               chr5:32696703-32696963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               249-476
               

               Cow position:
               chr5:56636014-56635793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 107
               

               Conread position:
               249-500
               

               Cow position:
               chr5:65588818-65588571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 84
               

               Conread position:
               249-502
               

               Cow position:
               chr5:58793488-58793745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               43, 126
               

               Conread position:
               250-505
               

               Cow position:
               chr5:20407560-20407806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               44, 101
               

               Conread position:
               251-488
               

               Cow position:
               chr5:49440754-49440991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 137
               

               Conread position:
               251-495
               

               Cow position:
               chr5:59717853-59717622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               42, 71
               

               Conread position:
               255-488
               

               Cow position:
               chr5:55929057-55928823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               38, 119
               

               Conread position:
               255-500
               

               Cow position:
               chr5:67540088-67540335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               38, 154
               

               Conread position:
               259-509
               

               Cow position:
               chr5:33414302-33414556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               153, 36
               

               Conread position:
               265-419
               

               Cow position:
               chr5:43408255-43408407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               28, 79
               

               Conread position:
               265-494
               

               Cow position:
               chr5:36255154-36255385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 109
               

               Conread position:
               267-496
               

               Cow position:
               chr5:19524001-19523771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 107
               

               Conread position:
               267-502
               

               Cow position:
               chr5:65601558-65601326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               26, 116
               

               Conread position:
               267-509
               

               Cow position:
               chr5:44049799-44049555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 53
               

               Conread position:
               268-487
               

               Cow position:
               chr5:71723176-71722947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               268-502
               

               Cow position:
               chr5:69520991-69520759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               25, 104
               

               Conread position:
               269-502
               

               Cow position:
               chr5:64137355-64137117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               24, 105
               

               Conread position:
               270-502
               

               Cow position:
               chr5:16509204-16508960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               23, 124
               

               Conread position:
               272-500
               

               Cow position:
               chr5:740844-741071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               272-500
               

               Cow position:
               chr5:56820168-56820394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               136, 23
               

               Conread position:
               276-502
               

               Cow position:
               chr5:34528639-34528427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               283-502
               

               Cow position:
               chr5:31144702-31144921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               10, 87
               

               Conread position:
               290-493
               

               Cow position:
               chr5:50799610-50799416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               290-502
               

               Cow position:
               chr5:66404209-66404009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               122, 16
               

               Conread position:
               291-502
               

               Cow position:
               chr5:21920455-21920237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               99, 28
               

               Conread position:
               291-507
               

               Cow position:
               chr5:32140633-32140849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               121, 84
               

               Conread position:
               291-507
               

               Cow position:
               chr5:34638959-34638744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               115, 74
               

               Conread position:
               291-509
               

               Cow position:
               chr5:28926105-28926324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               112, 81
               

               Conread position:
               292-502
               

               Cow position:
               chr5:6670119-6670328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               115, 82
               

               Conread position:
               298-501
               

               Cow position:
               chr5:21964357-21964153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               108, 73
               

               Conread position:
               299-500
               

               Cow position:
               chr5:2500112-2500321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               299-502
               

               Cow position:
               chr5:64823244-64823443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               105, 66
               

               Conread position:
               301-500
               

               Cow position:
               chr5:62826686-62826886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               307-503
               

               Cow position:
               chr5:23866112-23866296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 53
               

               Conread position:
               318-494
               

               Cow position:
               chr5:7921356-7921525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 40
               

               Conread position:
               319-502
               

               Cow position:
               chr5:60126420-60126239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               93, 54
               

               Conread position:
               319-507
               

               Cow position:
               chr5:24485387-24485572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               89, 54
               

               Conread position:
               319-507
               

               Cow position:
               chr5:34115700-34115512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               319-508
               

               Cow position:
               chr5:29212991-29212805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               83, 51
               

               Conread position:
               319-509
               

               Cow position:
               chr5:1779238-1779412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               174, 15
               

               Conread position:
               320-477
               

               Cow position:
               chr5:55849698-55849851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               94, 31
               

               Conread position:
               320-502
               

               Cow position:
               chr5:27015726-27015550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               150
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               174, 37
               

               Conread position:
               320-509
               

               Cow position:
               chr5:7140060-7140252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 56
               

               Conread position:
               322-500
               

               Cow position:
               chr5:6086516-6086690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               88, 43
               

               Conread position:
               327-502
               

               Cow position:
               chr5:8994526-8994700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 49
               

               Conread position:
               327-509
               

               Cow position:
               chr5:38647394-38647218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               87, 36
               

               Conread position:
               329-508
               

               Cow position:
               chr5:47721581-47721402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               332-494
               

               Cow position:
               chr5:9859678-9859838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               81, 9
               

               Conread position:
               333-502
               

               Cow position:
               chr5:34288435-34288601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               74, 40
               

               Conread position:
               334-500
               

               Cow position:
               chr5:56334719-56334546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               368-509
               

               Cow position:
               chr5:39242195-39242337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               126, 35
               

               Conread position:
               369-502
               

               Cow position:
               chr5:56433806-56433670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               369-507
               

               Cow position:
               chr5:4797315-4797451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               374-502
               

               Cow position:
               chr5:45037019-45036887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 77
               
Show alignments to all cow chromosomes.
Conread position:	124-502
Cow position:	chr5:30487491-30487104 (view UCSC Genome Browser custom track)
Alignm length:	397
Alignm identity:	270
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	40, 18
Conread position:	144-485
Cow position:	chr5:55956151-55955793 (view UCSC Genome Browser custom track)
Alignm length:	368
Alignm identity:	261
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	96, 11
Conread position:	148-506
Cow position:	chr5:40109722-40109358 (view UCSC Genome Browser custom track)
Alignm length:	377
Alignm identity:	277
Alignm E-value:	0
Alignm gaps (pig, cow):	91, 7
Conread position:	148-509
Cow position:	chr5:11539814-11540191 (view UCSC Genome Browser custom track)
Alignm length:	387
Alignm identity:	253
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	86, 23
Conread position:	150-502
Cow position:	chr5:2309321-2309694 (view UCSC Genome Browser custom track)
Alignm length:	378
Alignm identity:	256
Alignm E-value:	5e-35
Alignm gaps (pig, cow):	85, 234
Conread position:	153-368
Cow position:	chr5:34914820-34915055 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	169
Alignm E-value:	7e-28
Alignm gaps (pig, cow):	47, 0
Conread position:	153-406
Cow position:	chr5:40237422-40237178 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	181
Alignm E-value:	9e-30
Alignm gaps (pig, cow):	98, 40
Conread position:	153-483
Cow position:	chr5:49474320-49474659 (view UCSC Genome Browser custom track)
Alignm length:	346
Alignm identity:	260
Alignm E-value:	0
Alignm gaps (pig, cow):	89, 232
Conread position:	154-509
Cow position:	chr5:44446642-44447010 (view UCSC Genome Browser custom track)
Alignm length:	372
Alignm identity:	285
Alignm E-value:	0
Alignm gaps (pig, cow):	83, 231
Conread position:	155-418
Cow position:	chr5:67118634-67118369 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	201
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	40, 5
Conread position:	155-449
Cow position:	chr5:41604836-41604544 (view UCSC Genome Browser custom track)
Alignm length:	301
Alignm identity:	198
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	98, 72
Conread position:	155-502
Cow position:	chr5:69338046-69337697 (view UCSC Genome Browser custom track)
Alignm length:	364
Alignm identity:	263
Alignm E-value:	0
Alignm gaps (pig, cow):	58, 217
Conread position:	156-502
Cow position:	chr5:47870824-47871181 (view UCSC Genome Browser custom track)
Alignm length:	366
Alignm identity:	248
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	76, 17
Conread position:	157-459
Cow position:	chr5:30805388-30805077 (view UCSC Genome Browser custom track)
Alignm length:	321
Alignm identity:	215
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	33, 18
Conread position:	157-461
Cow position:	chr5:50576001-50575693 (view UCSC Genome Browser custom track)
Alignm length:	316
Alignm identity:	215
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	20, 124
Conread position:	160-465
Cow position:	chr5:30233136-30232803 (view UCSC Genome Browser custom track)
Alignm length:	338
Alignm identity:	250
Alignm E-value:	9.80909e-45
Alignm gaps (pig, cow):	66, 11
Conread position:	160-507
Cow position:	chr5:74643457-74643810 (view UCSC Genome Browser custom track)
Alignm length:	366
Alignm identity:	260
Alignm E-value:	0
Alignm gaps (pig, cow):	93, 164
Conread position:	161-374
Cow position:	chr5:69383477-69383247 (view UCSC Genome Browser custom track)
Alignm length:	231
Alignm identity:	176
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	74, 0
Conread position:	161-406
Cow position:	chr5:50101153-50101413 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	183
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	77, 10
Conread position:	161-488
Cow position:	chr5:72006656-72006973 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	228
Alignm E-value:	4e-33
Alignm gaps (pig, cow):	76, 23