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Cow genome map

           
Conread name:
           
Pla1-C0000039_N19
        

               
Conread position:
               
80-460
               

               
Cow position:
               
chr6:41376077-41375693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
80-502
               

               
Cow position:
               
chr6:38640554-38640111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
118-500
               

               
Cow position:
               
chr6:34195884-34196268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
114, 11
               

               
Conread position:
               
143-507
               

               
Cow position:
               
chr6:53024554-53024921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 241
               

               
Conread position:
               
145-502
               

               
Cow position:
               
chr6:24031616-24031259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 7
               

               
Conread position:
               
145-502
               

               
Cow position:
               
chr6:28810769-28811112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 8
               

               
Conread position:
               
146-488
               

               
Cow position:
               
chr6:36645629-36645283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
21, 182
               

               
Conread position:
               
152-419
               

               
Cow position:
               
chr6:2899336-2899607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 73
               

               
Conread position:
               
153-368
               

               
Cow position:
               
chr6:1941587-1941820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
82, 175
               

               
Conread position:
               
153-369
               

               
Cow position:
               
chr6:1002031-1002252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
153-465
               

               
Cow position:
               
chr6:17245399-17245689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
141, 20
               

               
Conread position:
               
153-486
               

               
Cow position:
               
chr6:60273765-60274109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
153-488
               

               
Cow position:
               
chr6:66531596-66531926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
153-502
               

               
Cow position:
               
chr6:19264254-19264616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
153-502
               

               
Cow position:
               
chr6:21456430-21456806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 235
               

               
Conread position:
               
154-421
               

               
Cow position:
               
chr6:66570670-66570399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
155-284
               

               
Cow position:
               
chr6:47486964-47486839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 62
               

               
Conread position:
               
155-371
               

               
Cow position:
               
chr6:61110027-61109796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 142
               

               
Conread position:
               
155-429
               

               
Cow position:
               
chr6:3351273-3350973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
156-502
               

               
Cow position:
               
chr6:23532890-23532546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
156-506
               

               
Cow position:
               
chr6:51835641-51835274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
156-511
               

               
Cow position:
               
chr6:18954848-18955193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
157-314
               

               
Cow position:
               
chr6:106293-106449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
157-504
               

               
Cow position:
               
chr6:46466061-46465704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 234
               

               
Conread position:
               
158-385
               

               
Cow position:
               
chr6:67069573-67069820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
159-464
               

               
Cow position:
               
chr6:46558295-46557972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 239
               

               
Conread position:
               
161-315
               

               
Cow position:
               
chr6:54203832-54203992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
161-461
               

               
Cow position:
               
chr6:4469004-4468690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
161-461
               

               
Cow position:
               
chr6:16700492-16700187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
161-502
               

               
Cow position:
               
chr6:8562952-8562600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 7
               

               
Conread position:
               
161-502
               

               
Cow position:
               
chr6:26450538-26450201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
161-502
               

               
Cow position:
               
chr6:40032417-40032073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
161-503
               

               
Cow position:
               
chr6:44194318-44194663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
161-507
               

               
Cow position:
               
chr6:36470339-36470690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
67, 36
               

               
Conread position:
               
161-509
               

               
Cow position:
               
chr6:31564113-31564466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
161-509
               

               
Cow position:
               
chr6:38771510-38771161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 162
               

               
Conread position:
               
161-511
               

               
Cow position:
               
chr6:13687578-13687941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
162-507
               

               
Cow position:
               
chr6:38218879-38218545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
163-342
               

               
Cow position:
               
chr6:41226611-41226792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
163-345
               

               
Cow position:
               
chr6:56716045-56715852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 101
               

               
Conread position:
               
163-370
               

               
Cow position:
               
chr6:47884808-47885014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
57, 146
               

               
Conread position:
               
163-372
               

               
Cow position:
               
chr6:43651960-43651760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
163-379
               

               
Cow position:
               
chr6:5820023-5820246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
163-407
               

               
Cow position:
               
chr6:53546266-53546012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
70, 221
               

               
Conread position:
               
163-408
               

               
Cow position:
               
chr6:54082777-54083014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
130, 30
               

               
Conread position:
               
163-410
               

               
Cow position:
               
chr6:1475574-1475314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 229
               

               
Conread position:
               
163-417
               

               
Cow position:
               
chr6:19259121-19259377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 222
               

               
Conread position:
               
163-451
               

               
Cow position:
               
chr6:9302487-9302784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
63, 8
               

               
Conread position:
               
163-464
               

               
Cow position:
               
chr6:693909-694228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
163-464
               

               
Cow position:
               
chr6:37395165-37395488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
12, 312
               

               
Conread position:
               
163-487
               

               
Cow position:
               
chr6:32122132-32121807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 218
               

               
Conread position:
               
163-489
               

               
Cow position:
               
chr6:31535336-31535673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 226
               

               
Conread position:
               
163-494
               

               
Cow position:
               
chr6:11192243-11192577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 129
               

               
Conread position:
               
163-494
               

               
Cow position:
               
chr6:33917620-33917958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
163-494
               

               
Cow position:
               
chr6:50577751-50577413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chr6:24222940-24223280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
163-507
               

               
Cow position:
               
chr6:25614853-25615227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 347
               

               
Conread position:
               
163-507
               

               
Cow position:
               
chr6:56850254-56849887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
78, 168
               

               
Conread position:
               
163-509
               

               
Cow position:
               
chr6:37635006-37634656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 21
               

               
Conread position:
               
164-502
               

               
Cow position:
               
chr6:8966323-8965973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
165-340
               

               
Cow position:
               
chr6:58173577-58173384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
165-363
               

               
Cow position:
               
chr6:12623744-12623532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
165-369
               

               
Cow position:
               
chr6:60850934-60850712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 210
               

               
Conread position:
               
165-428
               

               
Cow position:
               
chr6:47305937-47306183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
127, 81
               

               
Conread position:
               
165-428
               

               
Cow position:
               
chr6:55417298-55417572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
87, 207
               

               
Conread position:
               
165-502
               

               
Cow position:
               
chr6:10105748-10106112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
165-502
               

               
Cow position:
               
chr6:54365094-54365448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
73, 226
               

               
Conread position:
               
165-507
               

               
Cow position:
               
chr6:21231746-21231409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
165-507
               

               
Cow position:
               
chr6:47575126-47574778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 205
               

               
Conread position:
               
165-507
               

               
Cow position:
               
chr6:65264316-65264661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 141
               

               
Conread position:
               
166-291
               

               
Cow position:
               
chr6:36493040-36493161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 61
               

               
Conread position:
               
166-291
               

               
Cow position:
               
chr6:67614932-67615062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
166-312
               

               
Cow position:
               
chr6:43540028-43540182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
166-315
               

               
Cow position:
               
chr6:62965685-62965832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
126, 73
               

               
Conread position:
               
166-342
               

               
Cow position:
               
chr6:21083307-21083503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
166-347
               

               
Cow position:
               
chr6:16091131-16090936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
166-352
               

               
Cow position:
               
chr6:51933773-51933582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
60, 52
               

               
Conread position:
               
166-369
               

               
Cow position:
               
chr6:58725601-58725380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
166-371
               

               
Cow position:
               
chr6:30024111-30023894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
166-374
               

               
Cow position:
               
chr6:21470198-21470423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
166-379
               

               
Cow position:
               
chr6:66839427-66839200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
60, 157
               

               
Conread position:
               
166-387
               

               
Cow position:
               
chr6:57320364-57320587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 124
               

               
Conread position:
               
166-403
               

               
Cow position:
               
chr6:67451430-67451665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
104, 76
               

               
Conread position:
               
166-406
               

               
Cow position:
               
chr6:21293264-21293518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
65, 129
               

               
Conread position:
               
166-408
               

               
Cow position:
               
chr6:50504690-50504430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 227
               

               
Conread position:
               
166-411
               

               
Cow position:
               
chr6:68685774-68685528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
66, 165
               

               
Conread position:
               
166-416
               

               
Cow position:
               
chr6:41655821-41656075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 215
               

               
Conread position:
               
166-451
               

               
Cow position:
               
chr6:54490512-54490803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 116
               

               
Conread position:
               
166-457
               

               
Cow position:
               
chr6:17068421-17068723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
166-460
               

               
Cow position:
               
chr6:22985628-22985935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 221
               

               
Conread position:
               
166-465
               

               
Cow position:
               
chr6:65259276-65259559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
166-489
               

               
Cow position:
               
chr6:38207251-38207597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
166-493
               

               
Cow position:
               
chr6:58370981-58370643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 139
               

               
Conread position:
               
166-496
               

               
Cow position:
               
chr6:20196092-20196406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr6:6460740-6460425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
247, 81
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr6:15300606-15300937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
77, 159
               

               
Conread position:
               
166-501
               

               
Cow position:
               
chr6:120471-120124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
166-501
               

               
Cow position:
               
chr6:36652633-36652301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 58
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr6:7128170-7128520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 226
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr6:13367516-13367173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
73, 223
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr6:17090814-17090479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 7
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr6:23401761-23402109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
63, 221
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr6:24468165-24468513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 204
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr6:26728310-26728646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 184
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr6:32126286-32125951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 214
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr6:32866987-32867326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr6:36196436-36196094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr6:36203055-36202708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
49, 161
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr6:49398395-49398734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 192
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr6:57404902-57405249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 216
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chr6:64432167-64431819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
59, 224
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr6:899087-899417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr6:29210711-29210377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 173
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr6:32287865-32287513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 218
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr6:45064801-45065141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 58
               

               
Conread position:
               
166-511
               

               
Cow position:
               
chr6:29485317-29484959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 227
               

               
Conread position:
               
168-347
               

               
Cow position:
               
chr6:23938283-23938093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
168-507
               

               
Cow position:
               
chr6:44078747-44078394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 144
               

               
Conread position:
               
168-509
               

               
Cow position:
               
chr6:35990006-35990356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 221
               

               
Conread position:
               
169-432
               

               
Cow position:
               
chr6:60143968-60144248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 208
               

               
Conread position:
               
169-435
               

               
Cow position:
               
chr6:34549607-34549347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
169-476
               

               
Cow position:
               
chr6:19293029-19292705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
60, 244
               

               
Conread position:
               
169-502
               

               
Cow position:
               
chr6:45690388-45690709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 6
               

               
Conread position:
               
169-503
               

               
Cow position:
               
chr6:39358112-39358464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 226
               

               
Conread position:
               
169-506
               

               
Cow position:
               
chr6:60118373-60118024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
87, 214
               

               
Conread position:
               
169-507
               

               
Cow position:
               
chr6:21061660-21062019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 137
               

               
Conread position:
               
169-508
               

               
Cow position:
               
chr6:65871262-65870903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 356
               

               
Conread position:
               
170-378
               

               
Cow position:
               
chr6:42035000-42034773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 108
               

               
Conread position:
               
170-487
               

               
Cow position:
               
chr6:43345210-43345550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
65, 226
               

               
Conread position:
               
170-500
               

               
Cow position:
               
chr6:31847014-31847338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
69, 106
               

               
Conread position:
               
170-502
               

               
Cow position:
               
chr6:61514968-61515316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
170-507
               

               
Cow position:
               
chr6:21869439-21869772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
170-509
               

               
Cow position:
               
chr6:39093975-39093611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 341
               

               
Conread position:
               
172-502
               

               
Cow position:
               
chr6:63047804-63047457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
173-340
               

               
Cow position:
               
chr6:69145568-69145399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
173-451
               

               
Cow position:
               
chr6:18117824-18118120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 160
               

               
Conread position:
               
173-487
               

               
Cow position:
               
chr6:24004747-24004439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
64, 186
               

               
Conread position:
               
173-489
               

               
Cow position:
               
chr6:59602988-59603313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 205
               

               
Conread position:
               
173-500
               

               
Cow position:
               
chr6:53460344-53460690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 219
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chr6:7189904-7190239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 10
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chr6:54133038-54132697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 192
               

               
Conread position:
               
174-412
               

               
Cow position:
               
chr6:26155373-26155123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 210
               

               
Conread position:
               
174-451
               

               
Cow position:
               
chr6:31228969-31228700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
174-469
               

               
Cow position:
               
chr6:37463231-37462936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 201
               

               
Conread position:
               
174-471
               

               
Cow position:
               
chr6:10487783-10487499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
174-475
               

               
Cow position:
               
chr6:143152-143460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
62, 169
               

               
Conread position:
               
174-483
               

               
Cow position:
               
chr6:52901443-52901134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 63
               

               
Conread position:
               
174-487
               

               
Cow position:
               
chr6:7119404-7119714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 202
               

               
Conread position:
               
174-489
               

               
Cow position:
               
chr6:37376317-37376623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
245, 34
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr6:12338216-12337864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
52, 206
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr6:35726316-35725975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
65, 218
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr6:46859944-46860284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 208
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr6:48803414-48803757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 134
               

               
Conread position:
               
175-355
               

               
Cow position:
               
chr6:37466302-37466115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
175-502
               

               
Cow position:
               
chr6:45596321-45596658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 101
               

               
Conread position:
               
175-504
               

               
Cow position:
               
chr6:4864348-4864665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr6:4383699-4383359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 180
               

               
Conread position:
               
176-488
               

               
Cow position:
               
chr6:28999733-29000030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 184
               

               
Conread position:
               
176-507
               

               
Cow position:
               
chr6:63720416-63720068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
177-418
               

               
Cow position:
               
chr6:34119140-34119390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
55, 140
               

               
Conread position:
               
178-506
               

               
Cow position:
               
chr6:60740232-60739889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
50, 208
               

               
Conread position:
               
180-500
               

               
Cow position:
               
chr6:9008406-9008729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
46, 212
               

               
Conread position:
               
180-501
               

               
Cow position:
               
chr6:14958134-14958464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 204
               

               
Conread position:
               
180-502
               

               
Cow position:
               
chr6:20097756-20098084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
188-500
               

               
Cow position:
               
chr6:61137558-61137257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
190-476
               

               
Cow position:
               
chr6:21736692-21736979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
191-455
               

               
Cow position:
               
chr6:29248667-29248419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
194-431
               

               
Cow position:
               
chr6:48469191-48468956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 185
               

               
Conread position:
               
197-487
               

               
Cow position:
               
chr6:8125511-8125224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
199-464
               

               
Cow position:
               
chr6:2623968-2623701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 116
               

               
Conread position:
               
200-494
               

               
Cow position:
               
chr6:21399574-21399864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 174
               

               
Conread position:
               
202-464
               

               
Cow position:
               
chr6:20929331-20929597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
208-502
               

               
Cow position:
               
chr6:40713317-40713618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 161
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chr6:33929375-33929629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
210-502
               

               
Cow position:
               
chr6:4559124-4559423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 124
               

               
Conread position:
               
211-493
               

               
Cow position:
               
chr6:16266895-16266609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 173
               

               
Conread position:
               
217-509
               

               
Cow position:
               
chr6:49002573-49002858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
218-502
               

               
Cow position:
               
chr6:9452604-9452889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 153
               

               
Conread position:
               
220-402
               

               
Cow position:
               
chr6:4702660-4702842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
220-502
               

               
Cow position:
               
chr6:21004838-21004548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
220-502
               

               
Cow position:
               
chr6:49421632-49421903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
220-502
               

               
Cow position:
               
chr6:50984383-50984108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
220-507
               

               
Cow position:
               
chr6:8209443-8209716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
220-507
               

               
Cow position:
               
chr6:12091835-12092113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
220-509
               

               
Cow position:
               
chr6:31635522-31635818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 162
               

               
Conread position:
               
221-459
               

               
Cow position:
               
chr6:11830348-11830118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
191, 12
               

               
Conread position:
               
221-491
               

               
Cow position:
               
chr6:58590436-58590170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
17, 176
               

               
Conread position:
               
221-501
               

               
Cow position:
               
chr6:25008879-25008595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
222-494
               

               
Cow position:
               
chr6:35471350-35471630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
222-502
               

               
Cow position:
               
chr6:47640272-47640553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
222-507
               

               
Cow position:
               
chr6:53519462-53519750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
224-462
               

               
Cow position:
               
chr6:23465875-23466108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
224-486
               

               
Cow position:
               
chr6:17548814-17549084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
225-408
               

               
Cow position:
               
chr6:36920819-36920998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
225-494
               

               
Cow position:
               
chr6:528126-528384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
26, 143
               

               
Conread position:
               
225-495
               

               
Cow position:
               
chr6:52478253-52478525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 164
               

               
Conread position:
               
225-511
               

               
Cow position:
               
chr6:26915486-26915200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
226-488
               

               
Cow position:
               
chr6:51969233-51968964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
226-502
               

               
Cow position:
               
chr6:1499796-1499522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
226-502
               

               
Cow position:
               
chr6:60350135-60350415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 150
               

               
Conread position:
               
227-401
               

               
Cow position:
               
chr6:22592500-22592667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
227-438
               

               
Cow position:
               
chr6:31078713-31078927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
62, 145
               

               
Conread position:
               
227-449
               

               
Cow position:
               
chr6:61142409-61142630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
227-450
               

               
Cow position:
               
chr6:36284398-36284175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
227-487
               

               
Cow position:
               
chr6:60667567-60667314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
227-500
               

               
Cow position:
               
chr6:66131462-66131185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
227-501
               

               
Cow position:
               
chr6:32268732-32268995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chr6:416281-415978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 180
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chr6:5113898-5114165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chr6:7989260-7989532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
227-507
               

               
Cow position:
               
chr6:5609291-5609567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 103
               

               
Conread position:
               
228-491
               

               
Cow position:
               
chr6:61168910-61168667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 132
               

               
Conread position:
               
229-447
               

               
Cow position:
               
chr6:60468393-60468173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
232-367
               

               
Cow position:
               
chr6:57328243-57328380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
233-368
               

               
Cow position:
               
chr6:1871048-1871186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
233-472
               

               
Cow position:
               
chr6:61269462-61269221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
233-494
               

               
Cow position:
               
chr6:38853509-38853765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
18, 141
               

               
Conread position:
               
233-500
               

               
Cow position:
               
chr6:445473-445197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
233-500
               

               
Cow position:
               
chr6:17414295-17414565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 147
               

               
Conread position:
               
233-500
               

               
Cow position:
               
chr6:18048878-18049148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr6:15305718-15305461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr6:47520203-47519930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
233-506
               

               
Cow position:
               
chr6:14949331-14949603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 146
               

               
Conread position:
               
233-507
               

               
Cow position:
               
chr6:16316466-16316179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 182
               

               
Conread position:
               
234-416
               

               
Cow position:
               
chr6:60266034-60266215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
17, 118
               

               
Conread position:
               
235-372
               

               
Cow position:
               
chr6:61569777-61569640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
235-408
               

               
Cow position:
               
chr6:18903904-18904076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
235-408
               

               
Cow position:
               
chr6:63065977-63065801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
17, 138
               

               
Conread position:
               
235-411
               

               
Cow position:
               
chr6:51463486-51463659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
235-428
               

               
Cow position:
               
chr6:1422634-1422440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
18, 138
               

               
Conread position:
               
235-461
               

               
Cow position:
               
chr6:16287913-16288130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
235-474
               

               
Cow position:
               
chr6:37332258-37332016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 161
               

               
Conread position:
               
235-482
               

               
Cow position:
               
chr6:17794616-17794855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 139
               

               
Conread position:
               
235-494
               

               
Cow position:
               
chr6:6264801-6264532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
235-494
               

               
Cow position:
               
chr6:67323457-67323205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
235-499
               

               
Cow position:
               
chr6:8637429-8637158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr6:17313881-17313614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr6:28483164-28482899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 134
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr6:35993731-35993461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
235-503
               

               
Cow position:
               
chr6:41733780-41733504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
14, 146
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chr6:19996761-19996494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chr6:46282856-46283125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 145
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chr6:60819660-60819388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
235-509
               

               
Cow position:
               
chr6:12669242-12668974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
230, 58
               

               
Conread position:
               
235-509
               

               
Cow position:
               
chr6:14914088-14914372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
236-338
               

               
Cow position:
               
chr6:28900473-28900368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
236-342
               

               
Cow position:
               
chr6:3936929-3936822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
236-347
               

               
Cow position:
               
chr6:54349840-54349727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
236-355
               

               
Cow position:
               
chr6:12761425-12761304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
236-368
               

               
Cow position:
               
chr6:18422844-18422979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
236-372
               

               
Cow position:
               
chr6:54471785-54471923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
236-379
               

               
Cow position:
               
chr6:54529434-54529296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
236-379
               

               
Cow position:
               
chr6:58459867-58459722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
236-408
               

               
Cow position:
               
chr6:67451224-67451396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
236-411
               

               
Cow position:
               
chr6:62056761-62056586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 140
               

               
Conread position:
               
236-428
               

               
Cow position:
               
chr6:32853334-32853141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
236-443
               

               
Cow position:
               
chr6:68816313-68816107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
236-449
               

               
Cow position:
               
chr6:49437480-49437278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
14, 137
               

               
Conread position:
               
236-476
               

               
Cow position:
               
chr6:61524058-61524294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
15, 136
               

               
Conread position:
               
236-477
               

               
Cow position:
               
chr6:68376176-68376415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
236-483
               

               
Cow position:
               
chr6:16764499-16764752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
13, 179
               

               
Conread position:
               
236-487
               

               
Cow position:
               
chr6:58597358-58597608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 145
               

               
Conread position:
               
236-494
               

               
Cow position:
               
chr6:2547402-2547135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 195
               

               
Conread position:
               
236-494
               

               
Cow position:
               
chr6:28976893-28977146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
15, 134
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr6:6401097-6400833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr6:12551417-12551150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr6:13040586-13040337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr6:16191818-16191549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr6:42565834-42565569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
57, 128
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr6:51581109-51581373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
60, 72
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr6:55282146-55282406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
15, 136
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr6:57546082-57546334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr6:57571626-57571357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr6:67214896-67214624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
236-503
               

               
Cow position:
               
chr6:15243402-15243135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 124
               

               
Conread position:
               
236-503
               

               
Cow position:
               
chr6:47799440-47799170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
236-506
               

               
Cow position:
               
chr6:54990854-54991124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 125
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr6:23696147-23695870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
236-509
               

               
Cow position:
               
chr6:7130733-7131004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
14, 150
               

               
Conread position:
               
236-509
               

               
Cow position:
               
chr6:9736514-9736773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
236-511
               

               
Cow position:
               
chr6:6965253-6965516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
236-511
               

               
Cow position:
               
chr6:67951096-67950824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
237-452
               

               
Cow position:
               
chr6:67643545-67643760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
237-461
               

               
Cow position:
               
chr6:16103052-16103272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 84
               

               
Conread position:
               
237-502
               

               
Cow position:
               
chr6:16423847-16423583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
237-507
               

               
Cow position:
               
chr6:48112342-48112077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
238-428
               

               
Cow position:
               
chr6:2078670-2078865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
238-432
               

               
Cow position:
               
chr6:68652206-68652402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
13, 136
               

               
Conread position:
               
238-441
               

               
Cow position:
               
chr6:18144342-18144135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 143
               

               
Conread position:
               
238-460
               

               
Cow position:
               
chr6:24536386-24536618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 226
               

               
Conread position:
               
238-461
               

               
Cow position:
               
chr6:5330556-5330336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
238-461
               

               
Cow position:
               
chr6:67282039-67281819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
238-462
               

               
Cow position:
               
chr6:60516970-60516749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
238-475
               

               
Cow position:
               
chr6:6060427-6060657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 127
               

               
Conread position:
               
238-485
               

               
Cow position:
               
chr6:1429784-1429537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 122
               

               
Conread position:
               
238-491
               

               
Cow position:
               
chr6:21514463-21514727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
238-491
               

               
Cow position:
               
chr6:35103183-35103443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
13, 147
               

               
Conread position:
               
238-494
               

               
Cow position:
               
chr6:10039868-10039610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 168
               

               
Conread position:
               
238-500
               

               
Cow position:
               
chr6:15242981-15242718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 132
               

               
Conread position:
               
238-500
               

               
Cow position:
               
chr6:19446395-19446141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
238-500
               

               
Cow position:
               
chr6:21235188-21234927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 128
               

               
Conread position:
               
238-500
               

               
Cow position:
               
chr6:53841361-53841617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 120
               

               
Conread position:
               
238-501
               

               
Cow position:
               
chr6:46571250-46570999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr6:11246911-11246643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
57, 103
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr6:15447053-15447324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr6:15937710-15937968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr6:17997175-17997435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr6:24781415-24781679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr6:35436139-35435884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 144
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr6:36189842-36189577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr6:37199393-37199655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr6:38441317-38441062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr6:53652185-53651923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr6:54867662-54867396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 144
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr6:61631464-61631729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 137
               

               
Conread position:
               
238-503
               

               
Cow position:
               
chr6:4691831-4692101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
238-506
               

               
Cow position:
               
chr6:582128-582393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
238-506
               

               
Cow position:
               
chr6:10176157-10176425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
238-506
               

               
Cow position:
               
chr6:19695951-19695680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr6:6098121-6098409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr6:11169847-11169578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr6:38641637-38641371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr6:54573404-54573118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr6:68049562-68049308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
238-509
               

               
Cow position:
               
chr6:5095397-5095683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 139
               

               
Conread position:
               
238-509
               

               
Cow position:
               
chr6:40774187-40774481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
238-511
               

               
Cow position:
               
chr6:35842802-35842521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
55, 104
               

               
Conread position:
               
238-511
               

               
Cow position:
               
chr6:37149334-37149062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
13, 135
               

               
Conread position:
               
239-422
               

               
Cow position:
               
chr6:32516966-32517139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
239-445
               

               
Cow position:
               
chr6:59770367-59770165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
239-488
               

               
Cow position:
               
chr6:9750913-9751150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
239-500
               

               
Cow position:
               
chr6:6343574-6343308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr6:3952661-3952402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 125
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr6:47305483-47305219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
53, 41
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr6:47355966-47355704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr6:50976192-50975938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
12, 136
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr6:67456862-67456593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 129
               

               
Conread position:
               
239-503
               

               
Cow position:
               
chr6:19013207-19012946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
239-507
               

               
Cow position:
               
chr6:31526190-31525921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 117
               

               
Conread position:
               
239-507
               

               
Cow position:
               
chr6:35613273-35613541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 142
               

               
Conread position:
               
239-510
               

               
Cow position:
               
chr6:66874493-66874221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
240-465
               

               
Cow position:
               
chr6:13565229-13565002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
8, 90
               

               
Conread position:
               
240-488
               

               
Cow position:
               
chr6:8787894-8788143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
11, 135
               

               
Conread position:
               
241-477
               

               
Cow position:
               
chr6:66375191-66375424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
241-488
               

               
Cow position:
               
chr6:59718938-59718691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
242-500
               

               
Cow position:
               
chr6:54864521-54864789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
242-502
               

               
Cow position:
               
chr6:62670005-62669754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 129
               

               
Conread position:
               
243-406
               

               
Cow position:
               
chr6:53090149-53089986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 136
               

               
Conread position:
               
243-509
               

               
Cow position:
               
chr6:51675047-51674785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
243-511
               

               
Cow position:
               
chr6:56843293-56843028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
244-494
               

               
Cow position:
               
chr6:52412997-52412747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 97
               

               
Conread position:
               
244-511
               

               
Cow position:
               
chr6:38614951-38614689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
246-502
               

               
Cow position:
               
chr6:53932711-53932964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 54
               

               
Conread position:
               
254-502
               

               
Cow position:
               
chr6:55763981-55763734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 66
               

               
Conread position:
               
255-494
               

               
Cow position:
               
chr6:5413947-5413708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
150, 109
               

               
Conread position:
               
255-502
               

               
Cow position:
               
chr6:23247839-23248079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
255-502
               

               
Cow position:
               
chr6:61608639-61608391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
256-450
               

               
Cow position:
               
chr6:15022421-15022615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
257-502
               

               
Cow position:
               
chr6:12542805-12543053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 117
               

               
Conread position:
               
257-509
               

               
Cow position:
               
chr6:28318522-28318276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
258-495
               

               
Cow position:
               
chr6:54036019-54036247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
259-491
               

               
Cow position:
               
chr6:54208012-54208247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
259-494
               

               
Cow position:
               
chr6:16746466-16746229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
259-494
               

               
Cow position:
               
chr6:55209680-55209445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
259-502
               

               
Cow position:
               
chr6:50467258-50467015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
262-502
               

               
Cow position:
               
chr6:130043-130281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
265-500
               

               
Cow position:
               
chr6:54368787-54369018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 112
               

               
Conread position:
               
265-500
               

               
Cow position:
               
chr6:57164546-57164308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
265-509
               

               
Cow position:
               
chr6:377242-377004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
267-490
               

               
Cow position:
               
chr6:17704946-17704712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr6:1770083-1770306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 106
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr6:50747112-50746873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr6:61113882-61113643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
267-509
               

               
Cow position:
               
chr6:16261893-16261659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 83
               

               
Conread position:
               
268-494
               

               
Cow position:
               
chr6:20157447-20157218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
274-487
               

               
Cow position:
               
chr6:59508464-59508255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
276-494
               

               
Cow position:
               
chr6:54430936-54430712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
284-456
               

               
Cow position:
               
chr6:36493443-36493622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
287-502
               

               
Cow position:
               
chr6:67968517-67968730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
290-502
               

               
Cow position:
               
chr6:62924906-62925113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
291-449
               

               
Cow position:
               
chr6:1944802-1944645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 27
               

               
Conread position:
               
291-500
               

               
Cow position:
               
chr6:12829136-12829340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
114, 82
               

               
Conread position:
               
291-502
               

               
Cow position:
               
chr6:24962234-24962029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
293-506
               

               
Cow position:
               
chr6:44984420-44984204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
295-448
               

               
Cow position:
               
chr6:67615345-67615496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
114, 77
               

               
Conread position:
               
295-501
               

               
Cow position:
               
chr6:52248047-52248249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 77
               

               
Conread position:
               
295-502
               

               
Cow position:
               
chr6:59109030-59108821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
113, 71
               

               
Conread position:
               
297-502
               

               
Cow position:
               
chr6:49410614-49410810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
76, 95
               

               
Conread position:
               
300-509
               

               
Cow position:
               
chr6:21542403-21542192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
112, 80
               

               
Conread position:
               
307-502
               

               
Cow position:
               
chr6:18961442-18961636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
99, 75
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr6:38234028-38233839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
315-502
               

               
Cow position:
               
chr6:9323214-9323042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
178, 57
               

               
Conread position:
               
316-462
               

               
Cow position:
               
chr6:63168931-63169081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
316-507
               

               
Cow position:
               
chr6:16411255-16411068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
318-502
               

               
Cow position:
               
chr6:40834406-40834589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
320-465
               

               
Cow position:
               
chr6:54364938-54365085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
320-502
               

               
Cow position:
               
chr6:34031721-34031543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
320-506
               

               
Cow position:
               
chr6:36928721-36928531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
321-502
               

               
Cow position:
               
chr6:19351099-19351274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
322-502
               

               
Cow position:
               
chr6:53731582-53731401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 54
               

               
Conread position:
               
325-502
               

               
Cow position:
               
chr6:58173240-58173066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 47
               

               
Conread position:
               
327-502
               

               
Cow position:
               
chr6:62479107-62479282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 65
               

               
Conread position:
               
340-502
               

               
Cow position:
               
chr6:603136-602973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 155
               

               
Conread position:
               
365-511
               

               
Cow position:
               
chr6:18968761-18968910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
369-507
               

               
Cow position:
               
chr6:15922983-15923126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
377-489
               

               
Cow position:
               
chr6:10636182-10636065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
382-502
               

               
Cow position:
               
chr6:32210625-32210748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
382-511
               

               
Cow position:
               
chr6:2013022-2012888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               
Show alignments to all cow chromosomes.