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Cow genome map

           
Conread name:
           
Pla1-C0000039_N19
        

               
Conread position:
               
80-502
               

               
Cow position:
               
chrX:43527775-43527370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
209, 62
               

               
Conread position:
               
82-476
               

               
Cow position:
               
chrX:23939765-23940131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
117-502
               

               
Cow position:
               
chrX:34544040-34543653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
144-325
               

               
Cow position:
               
chrX:40263913-40263723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
148-369
               

               
Cow position:
               
chrX:32910337-32910102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 23
               

               
Conread position:
               
152-408
               

               
Cow position:
               
chrX:16984872-16984591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
152-500
               

               
Cow position:
               
chrX:37072623-37072277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
74, 206
               

               
Conread position:
               
153-337
               

               
Cow position:
               
chrX:4942045-4942228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
153-412
               

               
Cow position:
               
chrX:4289670-4289399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 234
               

               
Conread position:
               
153-456
               

               
Cow position:
               
chrX:11454840-11455132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
153-461
               

               
Cow position:
               
chrX:20168790-20168467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
153-461
               

               
Cow position:
               
chrX:27261427-27261097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
153-491
               

               
Cow position:
               
chrX:917164-917485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
153-501
               

               
Cow position:
               
chrX:42171078-42171428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
153-507
               

               
Cow position:
               
chrX:31294348-31294694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 215
               

               
Conread position:
               
153-507
               

               
Cow position:
               
chrX:41871292-41870933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
154-380
               

               
Cow position:
               
chrX:32208593-32208837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
155-502
               

               
Cow position:
               
chrX:161634-161283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
155-509
               

               
Cow position:
               
chrX:8925913-8925559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
156-417
               

               
Cow position:
               
chrX:27306672-27306407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 224
               

               
Conread position:
               
157-332
               

               
Cow position:
               
chrX:5487717-5487897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
157-347
               

               
Cow position:
               
chrX:5026483-5026276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
157-369
               

               
Cow position:
               
chrX:42480059-42479831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
157-502
               

               
Cow position:
               
chrX:38642473-38642128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
158-461
               

               
Cow position:
               
chrX:918499-918818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
160-494
               

               
Cow position:
               
chrX:34504824-34505171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 239
               

               
Conread position:
               
160-502
               

               
Cow position:
               
chrX:4750109-4750437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
176, 41
               

               
Conread position:
               
161-412
               

               
Cow position:
               
chrX:11325879-11326140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 113
               

               
Conread position:
               
161-483
               

               
Cow position:
               
chrX:9650799-9651138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 234
               

               
Conread position:
               
161-484
               

               
Cow position:
               
chrX:42927602-42927933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
161-485
               

               
Cow position:
               
chrX:35885505-35885845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
78, 7
               

               
Conread position:
               
161-486
               

               
Cow position:
               
chrX:40826523-40826871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
161-494
               

               
Cow position:
               
chrX:20339668-20340012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
161-502
               

               
Cow position:
               
chrX:11072989-11073321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
161-502
               

               
Cow position:
               
chrX:22075023-22074667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
161-502
               

               
Cow position:
               
chrX:27175227-27174862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
161-503
               

               
Cow position:
               
chrX:39938311-39938653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
161-507
               

               
Cow position:
               
chrX:31729664-31729307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
162-500
               

               
Cow position:
               
chrX:29544661-29545009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
163-347
               

               
Cow position:
               
chrX:31744789-31744985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
163-458
               

               
Cow position:
               
chrX:2523475-2523771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
68, 10
               

               
Conread position:
               
163-483
               

               
Cow position:
               
chrX:33539377-33539052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
163-489
               

               
Cow position:
               
chrX:20584537-20584205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
163-500
               

               
Cow position:
               
chrX:39415164-39415498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
163-500
               

               
Cow position:
               
chrX:42994821-42994485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chrX:4399343-4398996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chrX:17662395-17662726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 87
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chrX:29542002-29542352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 221
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chrX:38218939-38218578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
73, 230
               

               
Conread position:
               
163-506
               

               
Cow position:
               
chrX:27145825-27145484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 196
               

               
Conread position:
               
163-507
               

               
Cow position:
               
chrX:23497471-23497805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
78, 97
               

               
Conread position:
               
163-507
               

               
Cow position:
               
chrX:34314247-34313889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 194
               

               
Conread position:
               
163-507
               

               
Cow position:
               
chrX:45429805-45430157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
163-507
               

               
Cow position:
               
chrX:46072604-46072961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 211
               

               
Conread position:
               
165-355
               

               
Cow position:
               
chrX:29467558-29467766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
165-381
               

               
Cow position:
               
chrX:3806901-3806668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
165-445
               

               
Cow position:
               
chrX:19469291-19469575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 212
               

               
Conread position:
               
165-500
               

               
Cow position:
               
chrX:31442615-31442953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 219
               

               
Conread position:
               
166-314
               

               
Cow position:
               
chrX:25232205-25232048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
166-342
               

               
Cow position:
               
chrX:32867093-32866900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
166-347
               

               
Cow position:
               
chrX:20583883-20583686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
166-347
               

               
Cow position:
               
chrX:28098531-28098346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
166-354
               

               
Cow position:
               
chrX:23089058-23088869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
166-366
               

               
Cow position:
               
chrX:2936176-2935958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
166-367
               

               
Cow position:
               
chrX:27668739-27668958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
166-370
               

               
Cow position:
               
chrX:35278533-35278326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chrX:28940467-28940219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
60, 202
               

               
Conread position:
               
166-430
               

               
Cow position:
               
chrX:39352995-39352720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
77, 179
               

               
Conread position:
               
166-443
               

               
Cow position:
               
chrX:1087925-1088209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
64, 158
               

               
Conread position:
               
166-443
               

               
Cow position:
               
chrX:47650011-47650277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
166-448
               

               
Cow position:
               
chrX:4152821-4153113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 217
               

               
Conread position:
               
166-461
               

               
Cow position:
               
chrX:29050465-29050156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
166-489
               

               
Cow position:
               
chrX:9201766-9201431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 227
               

               
Conread position:
               
166-494
               

               
Cow position:
               
chrX:34792100-34792431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
166-499
               

               
Cow position:
               
chrX:7722197-7721859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chrX:1499877-1499534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 218
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chrX:45977147-45976789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
166-501
               

               
Cow position:
               
chrX:11656301-11655960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 235
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chrX:5637956-5638295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chrX:6544468-6544123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 153
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chrX:8869181-8869535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 227
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chrX:11614898-11614566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chrX:15006936-15007283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
74, 218
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chrX:17542164-17541834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chrX:21986078-21986425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 180
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chrX:27431701-27432047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chrX:30543085-30543420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chrX:38094303-38094656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
166-502
               

               
Cow position:
               
chrX:45502358-45502019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chrX:10959193-10959535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chrX:12437060-12437389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
58, 145
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chrX:13177261-13177605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chrX:13913298-13912940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 228
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chrX:35224499-35224158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 193
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chrX:7646459-7646114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chrX:29121244-29120910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
167-502
               

               
Cow position:
               
chrX:616058-616395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
167-502
               

               
Cow position:
               
chrX:1615836-1616177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
168-465
               

               
Cow position:
               
chrX:20881740-20882032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
64, 117
               

               
Conread position:
               
169-347
               

               
Cow position:
               
chrX:31480186-31479991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
67, 142
               

               
Conread position:
               
169-380
               

               
Cow position:
               
chrX:39290575-39290346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
169-456
               

               
Cow position:
               
chrX:6559236-6559531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 212
               

               
Conread position:
               
169-462
               

               
Cow position:
               
chrX:1466383-1466069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 230
               

               
Conread position:
               
169-464
               

               
Cow position:
               
chrX:45649090-45648779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
64, 60
               

               
Conread position:
               
169-501
               

               
Cow position:
               
chrX:40685109-40685463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 224
               

               
Conread position:
               
169-508
               

               
Cow position:
               
chrX:31436689-31436337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 221
               

               
Conread position:
               
169-509
               

               
Cow position:
               
chrX:39558163-39558493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
169-511
               

               
Cow position:
               
chrX:1503527-1503194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
170-458
               

               
Cow position:
               
chrX:41238143-41238439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 154
               

               
Conread position:
               
170-459
               

               
Cow position:
               
chrX:31489740-31489431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 224
               

               
Conread position:
               
170-472
               

               
Cow position:
               
chrX:24365603-24365929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
56, 232
               

               
Conread position:
               
170-502
               

               
Cow position:
               
chrX:11938734-11939060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 210
               

               
Conread position:
               
170-502
               

               
Cow position:
               
chrX:33001117-33000774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
80, 210
               

               
Conread position:
               
170-507
               

               
Cow position:
               
chrX:38964316-38963966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 212
               

               
Conread position:
               
170-508
               

               
Cow position:
               
chrX:4632635-4632993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 219
               

               
Conread position:
               
170-509
               

               
Cow position:
               
chrX:20152067-20151704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
56, 157
               

               
Conread position:
               
170-509
               

               
Cow position:
               
chrX:37575035-37574710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 73
               

               
Conread position:
               
172-453
               

               
Cow position:
               
chrX:41192906-41192625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
172-469
               

               
Cow position:
               
chrX:43779648-43779946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
73, 207
               

               
Conread position:
               
172-507
               

               
Cow position:
               
chrX:37119792-37119459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
65, 160
               

               
Conread position:
               
173-341
               

               
Cow position:
               
chrX:23358901-23359085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 150
               

               
Conread position:
               
173-371
               

               
Cow position:
               
chrX:19286685-19286895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 101
               

               
Conread position:
               
173-383
               

               
Cow position:
               
chrX:16836078-16836302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
173-408
               

               
Cow position:
               
chrX:47061602-47061358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
173-411
               

               
Cow position:
               
chrX:45382845-45383096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
66, 137
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chrX:20957455-20957186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
49, 194
               

               
Conread position:
               
173-466
               

               
Cow position:
               
chrX:38560766-38560461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 212
               

               
Conread position:
               
173-500
               

               
Cow position:
               
chrX:11856618-11856297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
120, 68
               

               
Conread position:
               
173-501
               

               
Cow position:
               
chrX:5919703-5919364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chrX:1175774-1176112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 45
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chrX:25713991-25713664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 54
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chrX:41123261-41122937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chrX:6234269-6234595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
155, 27
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chrX:14973541-14973880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
66, 129
               

               
Conread position:
               
174-369
               

               
Cow position:
               
chrX:46069970-46070174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chrX:4467166-4466963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
174-474
               

               
Cow position:
               
chrX:34836857-34837158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
174-488
               

               
Cow position:
               
chrX:47248582-47248903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 205
               

               
Conread position:
               
174-503
               

               
Cow position:
               
chrX:48044008-48044329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 92
               

               
Conread position:
               
175-499
               

               
Cow position:
               
chrX:43115363-43115021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 158
               

               
Conread position:
               
176-472
               

               
Cow position:
               
chrX:46291354-46291036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 210
               

               
Conread position:
               
177-348
               

               
Cow position:
               
chrX:20340446-20340624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
184-486
               

               
Cow position:
               
chrX:14275542-14275850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
7, 210
               

               
Conread position:
               
190-487
               

               
Cow position:
               
chrX:39126505-39126216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
193-502
               

               
Cow position:
               
chrX:20791639-20791951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
197-507
               

               
Cow position:
               
chrX:8731265-8730949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
200-500
               

               
Cow position:
               
chrX:36976120-36975818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
217-502
               

               
Cow position:
               
chrX:36356257-36355982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
219-500
               

               
Cow position:
               
chrX:42469791-42470072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
220-412
               

               
Cow position:
               
chrX:19394702-19394512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
220-482
               

               
Cow position:
               
chrX:30133169-30133434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 153
               

               
Conread position:
               
220-509
               

               
Cow position:
               
chrX:34532669-34532382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
222-345
               

               
Cow position:
               
chrX:35387779-35387902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 87
               

               
Conread position:
               
222-502
               

               
Cow position:
               
chrX:4996735-4996468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 155
               

               
Conread position:
               
222-502
               

               
Cow position:
               
chrX:37836725-37836458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
225-502
               

               
Cow position:
               
chrX:33493921-33493645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
226-412
               

               
Cow position:
               
chrX:12082180-12082365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
226-486
               

               
Cow position:
               
chrX:43050209-43049945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
226-502
               

               
Cow position:
               
chrX:35273508-35273223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
25, 218
               

               
Conread position:
               
227-336
               

               
Cow position:
               
chrX:29688033-29688144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
227-370
               

               
Cow position:
               
chrX:17956833-17956690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
24, 92
               

               
Conread position:
               
227-451
               

               
Cow position:
               
chrX:18272916-18273139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
227-472
               

               
Cow position:
               
chrX:16348428-16348672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
227-494
               

               
Cow position:
               
chrX:19003421-19003176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chrX:618865-619137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chrX:7718987-7718725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chrX:44961896-44961618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
10, 150
               

               
Conread position:
               
227-507
               

               
Cow position:
               
chrX:12249958-12249663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
227-509
               

               
Cow position:
               
chrX:7278055-7277773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 141
               

               
Conread position:
               
228-488
               

               
Cow position:
               
chrX:36514749-36515008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 148
               

               
Conread position:
               
228-488
               

               
Cow position:
               
chrX:37910586-37910328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
228-494
               

               
Cow position:
               
chrX:47481938-47481676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
228-500
               

               
Cow position:
               
chrX:7509280-7509011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
228-502
               

               
Cow position:
               
chrX:7162198-7161927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
229-464
               

               
Cow position:
               
chrX:45099269-45099031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 175
               

               
Conread position:
               
229-502
               

               
Cow position:
               
chrX:11082479-11082747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
5, 148
               

               
Conread position:
               
230-385
               

               
Cow position:
               
chrX:32942936-32943097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
232-345
               

               
Cow position:
               
chrX:4617260-4617376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
232-348
               

               
Cow position:
               
chrX:21573710-21573592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
232-459
               

               
Cow position:
               
chrX:45670360-45670136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 125
               

               
Conread position:
               
232-488
               

               
Cow position:
               
chrX:34315659-34315407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 146
               

               
Conread position:
               
232-502
               

               
Cow position:
               
chrX:37232545-37232280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 126
               

               
Conread position:
               
232-503
               

               
Cow position:
               
chrX:18694794-18695054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
233-424
               

               
Cow position:
               
chrX:35985954-35985764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
233-500
               

               
Cow position:
               
chrX:19273570-19273854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
233-503
               

               
Cow position:
               
chrX:22822183-22821917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
16, 140
               

               
Conread position:
               
233-503
               

               
Cow position:
               
chrX:25035245-25035518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 138
               

               
Conread position:
               
233-507
               

               
Cow position:
               
chrX:3580081-3579804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
233-507
               

               
Cow position:
               
chrX:43730087-43730355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
234-408
               

               
Cow position:
               
chrX:24749221-24749051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
234-488
               

               
Cow position:
               
chrX:17726110-17725856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
235-371
               

               
Cow position:
               
chrX:42160758-42160623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
235-419
               

               
Cow position:
               
chrX:22392850-22393035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
58, 139
               

               
Conread position:
               
235-439
               

               
Cow position:
               
chrX:32623705-32623498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 132
               

               
Conread position:
               
235-459
               

               
Cow position:
               
chrX:41270851-41271087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
235-461
               

               
Cow position:
               
chrX:31250523-31250296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 140
               

               
Conread position:
               
235-464
               

               
Cow position:
               
chrX:37129404-37129175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 135
               

               
Conread position:
               
235-465
               

               
Cow position:
               
chrX:12095637-12095869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
14, 142
               

               
Conread position:
               
235-475
               

               
Cow position:
               
chrX:34377077-34376842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 123
               

               
Conread position:
               
235-491
               

               
Cow position:
               
chrX:46433626-46433365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 144
               

               
Conread position:
               
235-494
               

               
Cow position:
               
chrX:7710404-7710667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
235-494
               

               
Cow position:
               
chrX:14599667-14599409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
128, 60
               

               
Conread position:
               
235-494
               

               
Cow position:
               
chrX:48044381-48044636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
235-500
               

               
Cow position:
               
chrX:20697474-20697738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 137
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chrX:12309251-12309518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 146
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chrX:13382460-13382196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chrX:14883820-14884091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 141
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chrX:18204328-18204596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 137
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chrX:23513886-23514148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chrX:32420347-32420085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chrX:44054937-44054668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 134
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chrX:27771833-27772101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chrX:33855085-33855373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chrX:42380977-42381240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 121
               

               
Conread position:
               
235-509
               

               
Cow position:
               
chrX:34554858-34554582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
236-354
               

               
Cow position:
               
chrX:41862497-41862377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 94
               

               
Conread position:
               
236-370
               

               
Cow position:
               
chrX:38587709-38587846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
236-374
               

               
Cow position:
               
chrX:4615877-4616018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
236-384
               

               
Cow position:
               
chrX:36848445-36848595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 72
               

               
Conread position:
               
236-396
               

               
Cow position:
               
chrX:29553419-29553260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 134
               

               
Conread position:
               
236-412
               

               
Cow position:
               
chrX:6599648-6599824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
236-415
               

               
Cow position:
               
chrX:40531909-40532087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 138
               

               
Conread position:
               
236-419
               

               
Cow position:
               
chrX:19943102-19943286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
15, 139
               

               
Conread position:
               
236-448
               

               
Cow position:
               
chrX:4515825-4515606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
236-449
               

               
Cow position:
               
chrX:22115183-22115396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
236-450
               

               
Cow position:
               
chrX:39220213-39220000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 130
               

               
Conread position:
               
236-452
               

               
Cow position:
               
chrX:5135386-5135607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
236-460
               

               
Cow position:
               
chrX:9252029-9252250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
236-482
               

               
Cow position:
               
chrX:41526395-41526633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
236-483
               

               
Cow position:
               
chrX:30337824-30338055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
236-485
               

               
Cow position:
               
chrX:6265465-6265712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
236-487
               

               
Cow position:
               
chrX:26881431-26881685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 143
               

               
Conread position:
               
236-487
               

               
Cow position:
               
chrX:45846235-45845982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 99
               

               
Conread position:
               
236-488
               

               
Cow position:
               
chrX:4043733-4043970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
236-488
               

               
Cow position:
               
chrX:40269626-40269370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
236-492
               

               
Cow position:
               
chrX:37780975-37781233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 139
               

               
Conread position:
               
236-492
               

               
Cow position:
               
chrX:42235390-42235652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
14, 140
               

               
Conread position:
               
236-494
               

               
Cow position:
               
chrX:5017288-5017538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
236-494
               

               
Cow position:
               
chrX:9635057-9635305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
236-500
               

               
Cow position:
               
chrX:878246-878506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
236-500
               

               
Cow position:
               
chrX:40557545-40557812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 146
               

               
Conread position:
               
236-500
               

               
Cow position:
               
chrX:45110790-45110528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
15, 133
               

               
Conread position:
               
236-501
               

               
Cow position:
               
chrX:46532361-46532638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 139
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chrX:12979700-12979960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 143
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chrX:22482557-22482818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 145
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chrX:31312163-31311896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 138
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chrX:34411980-34411711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 138
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chrX:35543021-35542762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chrX:38006637-38006897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 91
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chrX:40035306-40035573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
236-505
               

               
Cow position:
               
chrX:6414175-6413906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chrX:7695882-7695610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 72
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chrX:17795115-17794845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
15, 143
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chrX:23092005-23091741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
15, 126
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chrX:34192790-34192535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
236-510
               

               
Cow position:
               
chrX:48014569-48014298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 147
               

               
Conread position:
               
236-511
               

               
Cow position:
               
chrX:6690126-6690396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
15, 124
               

               
Conread position:
               
237-367
               

               
Cow position:
               
chrX:25788772-25788905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
237-367
               

               
Cow position:
               
chrX:29501751-29501881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 103
               

               
Conread position:
               
237-452
               

               
Cow position:
               
chrX:47345462-47345252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 125
               

               
Conread position:
               
237-454
               

               
Cow position:
               
chrX:23113418-23113194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 194
               

               
Conread position:
               
237-477
               

               
Cow position:
               
chrX:29230132-29229903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 129
               

               
Conread position:
               
237-502
               

               
Cow position:
               
chrX:5118365-5118635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 143
               

               
Conread position:
               
237-502
               

               
Cow position:
               
chrX:37986358-37986100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
237-502
               

               
Cow position:
               
chrX:41884279-41884547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
237-503
               

               
Cow position:
               
chrX:38853330-38853064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
237-507
               

               
Cow position:
               
chrX:36068148-36067879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
238-347
               

               
Cow position:
               
chrX:34508676-34508564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
238-399
               

               
Cow position:
               
chrX:20743736-20743575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
238-427
               

               
Cow position:
               
chrX:31626846-31627038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
238-430
               

               
Cow position:
               
chrX:46429687-46429881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
238-465
               

               
Cow position:
               
chrX:23562764-23562540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
238-469
               

               
Cow position:
               
chrX:31515306-31515070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
12, 146
               

               
Conread position:
               
238-472
               

               
Cow position:
               
chrX:45174982-45174747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
13, 138
               

               
Conread position:
               
238-476
               

               
Cow position:
               
chrX:169414-169646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
238-477
               

               
Cow position:
               
chrX:29194362-29194127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
238-483
               

               
Cow position:
               
chrX:38654309-38654543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
238-488
               

               
Cow position:
               
chrX:5679440-5679684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
238-488
               

               
Cow position:
               
chrX:42247050-42247303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
238-490
               

               
Cow position:
               
chrX:42855590-42855334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 131
               

               
Conread position:
               
238-494
               

               
Cow position:
               
chrX:5872449-5872193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 135
               

               
Conread position:
               
238-494
               

               
Cow position:
               
chrX:30962744-30962998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
238-494
               

               
Cow position:
               
chrX:38549579-38549328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
238-500
               

               
Cow position:
               
chrX:9365544-9365805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 136
               

               
Conread position:
               
238-500
               

               
Cow position:
               
chrX:27228259-27227992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
238-500
               

               
Cow position:
               
chrX:32821160-32820897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
238-501
               

               
Cow position:
               
chrX:40480735-40481001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
238-501
               

               
Cow position:
               
chrX:42873517-42873260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:152032-151771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:6278366-6278635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:7351429-7351166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:8797381-8797118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:9416553-9416826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
55, 104
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:10411852-10412118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
13, 132
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:11084932-11085190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:11717651-11717917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 211
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:29601696-29601962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:29680129-29680393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
11, 137
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:31252539-31252285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:33640107-33639838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 118
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:34503052-34502789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
10, 129
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:34565415-34565150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
170, 216
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:41027291-41027024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chrX:45414172-45414433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
13, 135
               

               
Conread position:
               
238-503
               

               
Cow position:
               
chrX:22387118-22387377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
238-506
               

               
Cow position:
               
chrX:46587954-46587682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
10, 137
               

               
Conread position:
               
238-509
               

               
Cow position:
               
chrX:17888291-17888554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
238-509
               

               
Cow position:
               
chrX:27393894-27394160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
238-509
               

               
Cow position:
               
chrX:45113753-45113482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
11, 101
               

               
Conread position:
               
239-456
               

               
Cow position:
               
chrX:40680744-40680525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 135
               

               
Conread position:
               
239-469
               

               
Cow position:
               
chrX:10516383-10516157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 127
               

               
Conread position:
               
239-477
               

               
Cow position:
               
chrX:17949363-17949597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 99
               

               
Conread position:
               
239-477
               

               
Cow position:
               
chrX:43568050-43567815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 121
               

               
Conread position:
               
239-500
               

               
Cow position:
               
chrX:41878803-41879063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chrX:10831357-10831626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chrX:21672690-21672422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 140
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chrX:38066324-38066583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 139
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chrX:38071641-38071897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
175, 58
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chrX:41068856-41068593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
12, 141
               

               
Conread position:
               
239-507
               

               
Cow position:
               
chrX:24424270-24424528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
239-507
               

               
Cow position:
               
chrX:44397140-44396881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
239-509
               

               
Cow position:
               
chrX:1514288-1514547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
239-509
               

               
Cow position:
               
chrX:37955978-37955691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
240-489
               

               
Cow position:
               
chrX:13647655-13647904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 115
               

               
Conread position:
               
240-502
               

               
Cow position:
               
chrX:15815212-15814954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 31
               

               
Conread position:
               
240-502
               

               
Cow position:
               
chrX:19690345-19690088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 103
               

               
Conread position:
               
241-408
               

               
Cow position:
               
chrX:29585248-29585084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 138
               

               
Conread position:
               
241-502
               

               
Cow position:
               
chrX:34441326-34441585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 98
               

               
Conread position:
               
241-507
               

               
Cow position:
               
chrX:27705714-27705444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 112
               

               
Conread position:
               
242-356
               

               
Cow position:
               
chrX:42481603-42481720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
242-371
               

               
Cow position:
               
chrX:25328489-25328619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 94
               

               
Conread position:
               
242-465
               

               
Cow position:
               
chrX:21328040-21327813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 144
               

               
Conread position:
               
242-491
               

               
Cow position:
               
chrX:24287806-24288045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 78
               

               
Conread position:
               
242-493
               

               
Cow position:
               
chrX:27516646-27516405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 34
               

               
Conread position:
               
243-507
               

               
Cow position:
               
chrX:7572033-7571766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 134
               

               
Conread position:
               
244-494
               

               
Cow position:
               
chrX:47484139-47484392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
244-502
               

               
Cow position:
               
chrX:34402132-34401865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
7, 114
               

               
Conread position:
               
246-491
               

               
Cow position:
               
chrX:45403703-45403951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
246-494
               

               
Cow position:
               
chrX:23563668-23563917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
246-494
               

               
Cow position:
               
chrX:46722612-46722861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
246-502
               

               
Cow position:
               
chrX:26625548-26625806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 133
               

               
Conread position:
               
246-507
               

               
Cow position:
               
chrX:48570866-48571132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
249-350
               

               
Cow position:
               
chrX:7513607-7513505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
249-502
               

               
Cow position:
               
chrX:11633802-11633545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
44, 129
               

               
Conread position:
               
250-423
               

               
Cow position:
               
chrX:47362504-47362676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
256-472
               

               
Cow position:
               
chrX:47967720-47967496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
256-502
               

               
Cow position:
               
chrX:21004797-21004552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
37, 118
               

               
Conread position:
               
259-507
               

               
Cow position:
               
chrX:31948825-31949071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
260-502
               

               
Cow position:
               
chrX:7497351-7497110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
261-491
               

               
Cow position:
               
chrX:40320514-40320284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 116
               

               
Conread position:
               
263-507
               

               
Cow position:
               
chrX:27680504-27680261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
30, 112
               

               
Conread position:
               
266-490
               

               
Cow position:
               
chrX:4403420-4403194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
266-490
               

               
Cow position:
               
chrX:45875495-45875271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
267-495
               

               
Cow position:
               
chrX:27945952-27946184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
26, 111
               

               
Conread position:
               
267-506
               

               
Cow position:
               
chrX:21642380-21642615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
268-502
               

               
Cow position:
               
chrX:21593382-21593154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
134, 27
               

               
Conread position:
               
269-494
               

               
Cow position:
               
chrX:22921421-22921192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
269-494
               

               
Cow position:
               
chrX:36061260-36061031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
269-502
               

               
Cow position:
               
chrX:2467984-2467750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
269-502
               

               
Cow position:
               
chrX:27685349-27685114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
273-408
               

               
Cow position:
               
chrX:44095356-44095222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
276-494
               

               
Cow position:
               
chrX:40809786-40809562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
276-502
               

               
Cow position:
               
chrX:37843810-37843587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
182, 96
               

               
Conread position:
               
277-507
               

               
Cow position:
               
chrX:34662754-34662989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 97
               

               
Conread position:
               
279-502
               

               
Cow position:
               
chrX:12405291-12405520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 94
               

               
Conread position:
               
286-502
               

               
Cow position:
               
chrX:13785280-13785496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
290-502
               

               
Cow position:
               
chrX:678478-678697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
86, 131
               

               
Conread position:
               
291-502
               

               
Cow position:
               
chrX:11589512-11589721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
111, 68
               

               
Conread position:
               
297-502
               

               
Cow position:
               
chrX:26875811-26876016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
110, 80
               

               
Conread position:
               
300-502
               

               
Cow position:
               
chrX:20710141-20709942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
193, 39
               

               
Conread position:
               
307-502
               

               
Cow position:
               
chrX:41166902-41167098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
315-489
               

               
Cow position:
               
chrX:40648038-40647868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
319-502
               

               
Cow position:
               
chrX:36961689-36961506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
86, 46
               

               
Conread position:
               
319-502
               

               
Cow position:
               
chrX:42875031-42874848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 52
               

               
Conread position:
               
319-506
               

               
Cow position:
               
chrX:35681390-35681201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
319-507
               

               
Cow position:
               
chrX:19015485-19015300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
170, 62
               

               
Conread position:
               
319-509
               

               
Cow position:
               
chrX:28845881-28845695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
322-498
               

               
Cow position:
               
chrX:17498130-17497957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
323-502
               

               
Cow position:
               
chrX:34991080-34990902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
172, 49
               

               
Conread position:
               
331-502
               

               
Cow position:
               
chrX:41743950-41743779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
334-502
               

               
Cow position:
               
chrX:38439514-38439345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
345-507
               

               
Cow position:
               
chrX:20583044-20582890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
148, 31
               

               
Conread position:
               
358-507
               

               
Cow position:
               
chrX:1505720-1505571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
360-502
               

               
Cow position:
               
chrX:35609999-35609855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
369-511
               

               
Cow position:
               
chrX:35969081-35969227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
373-502
               

               
Cow position:
               
chrX:11806014-11806146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
375-502
               

               
Cow position:
               
chrX:7513507-7513381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
381-502
               

               
Cow position:
               
chrX:35387911-35388035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               
Show alignments to all cow chromosomes.